FFCP PHASE1:Mm9::chrX:7151370..7151438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54646 | |EntrezGene=54646 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=483 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIG4 | |UniProt=Q9JIG4 | ||
|association_with_transcript=0bp_to_ENSMUST00000150787,ENSMUST00000170291_5end | |association_with_transcript=0bp_to_ENSMUST00000150787,ENSMUST00000170291_5end | ||
|cluster_id=chrX:7151370..7151438,- | |||
|description=CAGE_peak_2_at_Ppp1r3f_5end | |description=CAGE_peak_2_at_Ppp1r3f_5end | ||
|id=chrX:7151370..7151438,- | |id=chrX:7151370..7151438,- | ||
|ontology_enrichment_celltype=CL:0000117!9.61e-10!23;CL:0000337!9.61e-10!23;CL:0000540!2.13e-09!33;CL:0000047!2.13e-09!33;CL:0000031!2.13e-09!33;CL:0000404!2.13e-09!33;CL:0000393!6.21e-07!39;CL:0000211!6.21e-07!39 | |ontology_enrichment_celltype=CL:0000117!9.61e-10!23;CL:0000337!9.61e-10!23;CL:0000540!2.13e-09!33;CL:0000047!2.13e-09!33;CL:0000031!2.13e-09!33;CL:0000404!2.13e-09!33;CL:0000393!6.21e-07!39;CL:0000211!6.21e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.18e-10,23;CL:0000337,9.18e-10,23;CL:0000540,2.22e-09,33;CL:0000047,2.22e-09,33;CL:0000031,2.22e-09,33;CL:0000404,2.22e-09,33;CL:0000393,4.79e-07,39;CL:0000211,4.79e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.14e-21!63;UBERON:0001017!1.08e-19!73;UBERON:0005743!1.08e-19!73;UBERON:0001049!3.85e-19!52;UBERON:0005068!3.85e-19!52;UBERON:0006241!3.85e-19!52;UBERON:0007135!3.85e-19!52;UBERON:0002346!1.11e-18!71;UBERON:0003075!1.11e-18!71;UBERON:0007284!1.11e-18!71;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0007811!2.95e-18!86;UBERON:0002616!5.09e-18!49;UBERON:0000073!7.03e-18!75;UBERON:0001016!7.03e-18!75;UBERON:0003056!3.62e-16!49;UBERON:0004121!4.05e-16!102;UBERON:0000924!4.05e-16!102;UBERON:0006601!4.05e-16!102;UBERON:0000153!4.92e-16!94;UBERON:0003080!1.73e-14!40;UBERON:0002780!7.56e-14!39;UBERON:0001890!7.56e-14!39;UBERON:0006240!7.56e-14!39;UBERON:0002020!2.91e-12!34;UBERON:0002791!5.52e-10!29;UBERON:0003528!5.52e-10!29;UBERON:0001893!5.52e-10!29;UBERON:0000475!9.66e-08!200;UBERON:0000025!2.00e-07!114;UBERON:0004111!2.58e-07!122 | |ontology_enrichment_uberon=UBERON:0000033!1.14e-21!63;UBERON:0001017!1.08e-19!73;UBERON:0005743!1.08e-19!73;UBERON:0001049!3.85e-19!52;UBERON:0005068!3.85e-19!52;UBERON:0006241!3.85e-19!52;UBERON:0007135!3.85e-19!52;UBERON:0002346!1.11e-18!71;UBERON:0003075!1.11e-18!71;UBERON:0007284!1.11e-18!71;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0007811!2.95e-18!86;UBERON:0002616!5.09e-18!49;UBERON:0000073!7.03e-18!75;UBERON:0001016!7.03e-18!75;UBERON:0003056!3.62e-16!49;UBERON:0004121!4.05e-16!102;UBERON:0000924!4.05e-16!102;UBERON:0006601!4.05e-16!102;UBERON:0000153!4.92e-16!94;UBERON:0003080!1.73e-14!40;UBERON:0002780!7.56e-14!39;UBERON:0001890!7.56e-14!39;UBERON:0006240!7.56e-14!39;UBERON:0002020!2.91e-12!34;UBERON:0002791!5.52e-10!29;UBERON:0003528!5.52e-10!29;UBERON:0001893!5.52e-10!29;UBERON:0000475!9.66e-08!200;UBERON:0000025!2.00e-07!114;UBERON:0004111!2.58e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-20,54;UBERON:0002346,7.06e-20,64;UBERON:0003075,7.06e-20,64;UBERON:0007284,7.06e-20,64;UBERON:0001017,1.26e-19,73;UBERON:0001049,3.61e-19,52;UBERON:0005068,3.61e-19,52;UBERON:0006241,3.61e-19,52;UBERON:0007135,3.61e-19,52;UBERON:0001016,8.62e-18,75;UBERON:0000955,9.30e-17,47;UBERON:0006238,9.30e-17,47;UBERON:0004121,1.75e-16,95;UBERON:0000924,1.75e-16,95;UBERON:0006601,1.75e-16,95;UBERON:0003056,3.33e-16,49;UBERON:0002616,4.08e-16,46;UBERON:0010371,1.45e-15,73;UBERON:0003080,1.61e-14,40;UBERON:0002780,7.05e-14,39;UBERON:0001890,7.05e-14,39;UBERON:0006240,7.05e-14,39;UBERON:0010314,4.75e-13,92;UBERON:0002020,2.74e-12,34;UBERON:0003528,5.26e-10,29;UBERON:0002791,5.26e-10,29;UBERON:0001893,5.26e-10,29;UBERON:0000025,1.35e-07,114;UBERON:0004111,1.67e-07,122 | |||
|phase1_expression=5.76535849577258,3.14077866875425,2.72999543633722,3.32710632437513,3.00537437967808,2.01455126294268,0.934450562382103,15.8821687833139,4.36445038670167,4.68129052643987,2.56826952338257,4.06838010876216,6.67682846731702,9.44140346125172,1.33243904726265,3.03712901084739,2.09868563438444,4.41647031501533,4.38766187538364,5.09267582157636,3.14660173558958,1.48936426801328,0.783599367416806,0.47997726838022,1.60586496747019,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,1.51218077855958,1.33038306393183,3.81018404075779,1.23012957516914,0,2.59966457776147,1.82858109894342,1.83752420636132,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,4.36959317728038,2.26614272356039,2.93993100536592,2.75320128242522,3.12956537739216,0.65407546914134,1.09843091367236,1.94429899074283,0.979904951377538,1.43752564364972,3.35565212115473,6.5282592781021,5.04140698713696,0.257259436035947,0.286533439938757,0.515672092277442,5.05791152148994,2.11596391708813,5.07065122804943,1.35537812827653,1.77858959222228,2.6996991518442,1.97773272513395,2.1314403448383,0.299600110518405,2.30530983192933,3.7328260431052,4.05017814995072,5.8890989178387,3.99911378165325,5.07997644188711,3.1847607795888,2.1086003624012,1.83843757322004,8.8092704799511,12.257984456178,6.14426133024974,7.78129097608144,6.67859798297591,5.73004707612436,9.77140496504833,12.380777420697,8.25110537994775,4.71405736757868,5.69486723196412,6.89677949553612,0.681535739998656,0.604572480854284,2.31891590961342,2.58127163094416,1.3599426674155,1.07940638327563,0,1.79210754838934,1.12355536105401,1.02258193546835,0.519572009205738,0,4.08445917352373,0,0,0,0.649473123033642,1.77351905832569,1.51657333504435,1.37020655662872,0.517875767294343,2.67195850316685,4.68410382268567,2.13125834818499,2.07553947530453,1.80867168663147,1.52865319276416,2.26199864393416,3.70792451601561,1.3013942122792,1.76922110389975,1.7794353494215,1.54589062922275,2.42437626567611,0,7.61230072230023,8.16842156572475,1.78819938646014,0.838705871541442,0.599902730993408,1.01656181658452,8.68785708547972,4.11750542536764,6.03140890141749,6.43149984711423,7.92717917724025,7.48036960414416,7.94982189032012,2.64782346010822,1.7416975885413,1.26361379216837,2.52530227063769,1.95180664444056,3.21862946206862,3.06105620669094,3.31550599238573,4.76255494059295,3.71529788826064,4.77878795254617,3.62184719034622,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,1.94633074457919,1.74126083261083,2.26360350048738,4.37875387000685,1.40442637462647,0.772043721344145,1.13665399758237,2.07125772535502,1.64168241986767,2.52086886045421,1.89395788468168,3.14822770795846,1.69693824176116,1.39520366850245,2.68273401399619,2.10177616260905,1.97471819896177,0.32833492815819,1.86458261955468,1.31579988682799,1.75640092232841,1.74468344388483,5.67782861123144,5.45394445610208,1.98251269790279,1.05780226665418,3.19932375802851,1.62565670302307,1.67527699718721,1.00841762311671,1.11189021922435,1.52180500890047,1.89811624617805,1.4822905925161,3.01602250560323,1.79060824837036,2.33956904542944,0.898819408654221,1.29682829924817,2.78797782556114,2.46568271239006,2.85621281524322,4.50830942692322,2.44381593414377,1.55161989734101,3.0158402552837,2.84564417059158,1.91893192373483,1.56998727841375,2.09775178667061,1.48226313543574,1.50160595144485,1.17935397067922,0.674586337154561,1.82574109249653,1.92941727801933,1.2731292589071,3.16465751195892,1.94562272130042,1.37280706594041,1.43768206527355,2.97712758134803,1.87222603868736,3.53610429125956,1.4351793081753,2.8946611281802,2.77129785249907,3.7898282354097,2.44447464663039,2.54617628662782,2.34690248288502,2.1775813467436,1.6663054862021,2.92700471786698,4.57141917907954,3.32197034473162,4.14582398509466,2.45794972073607,2.93564469172023,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,7.70642831941401,11.2523219128515,0.163934945376675,1.26235463602186,2.52406575533005,0.780877488593277,2.58508077279359,3.10659437338318,2.67358408898873,4.52922449262132,2.02405350837447,3.79932615284705,2.37172666767914,8.03303291054518,2.41298144854057,3.73937767701236,3.25773918707152,1.97964147567043,0,2.6705869977048,2.41858845571801,2.64047111658257,1.77181135728464,1.53717573971964,3.87642439752332,2.90826983582004,2.13898427030833,2.21225730555071,2.10837217149998,2.06271086496374,4.08527526904546,2.52085531643834,4.39819524861365,3.21505552547388,3.90148514013002,6.59964625127661,4.77192159746151,5.78483403317739,3.05073220482823,2.96564899209348,0.441056796109924,0.8244312647074,1.13025098687134,2.0506394475573,0.835606408021955,1.31312719796049,1.1659233465194,6.11903496634682,2.05045056957423,2.27025554759545,2.22233432843654,1.69531611304222,1.36694227721025,2.28778173206523,2.37969801991397,1.39951452323658,1.52019971184866,1.90934123603023,3.16335993581135,1.82987520414164,2.37611749807963,0.836353184057875,1.31017538247707,0.944050424693745,2.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|phase1_expression=5.76535849577258,3.14077866875425,2.72999543633722,3.32710632437513,3.00537437967808,2.01455126294268,0.934450562382103,15.8821687833139,4.36445038670167,4.68129052643987,2.56826952338257,4.06838010876216,6.67682846731702,9.44140346125172,1.33243904726265,3.03712901084739,2.09868563438444,4.41647031501533,4.38766187538364,5.09267582157636,3.14660173558958,1.48936426801328,0.783599367416806,0.47997726838022,1.60586496747019,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,1.51218077855958,1.33038306393183,3.81018404075779,1.23012957516914,0,2.59966457776147,1.82858109894342,1.83752420636132,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,4.36959317728038,2.26614272356039,2.93993100536592,2.75320128242522,3.12956537739216,0.65407546914134,1.09843091367236,1.94429899074283,0.979904951377538,1.43752564364972,3.35565212115473,6.5282592781021,5.04140698713696,0.257259436035947,0.286533439938757,0.515672092277442,5.05791152148994,2.11596391708813,5.07065122804943,1.35537812827653,1.77858959222228,2.6996991518442,1.97773272513395,2.1314403448383,0.299600110518405,2.30530983192933,3.7328260431052,4.05017814995072,5.8890989178387,3.99911378165325,5.07997644188711,3.1847607795888,2.1086003624012,1.83843757322004,8.8092704799511,12.257984456178,6.14426133024974,7.78129097608144,6.67859798297591,5.73004707612436,9.77140496504833,12.380777420697,8.25110537994775,4.71405736757868,5.69486723196412,6.89677949553612,0.681535739998656,0.604572480854284,2.31891590961342,2.58127163094416,1.3599426674155,1.07940638327563,0,1.79210754838934,1.12355536105401,1.02258193546835,0.519572009205738,0,4.08445917352373,0,0,0,0.649473123033642,1.77351905832569,1.51657333504435,1.37020655662872,0.517875767294343,2.67195850316685,4.68410382268567,2.13125834818499,2.07553947530453,1.80867168663147,1.52865319276416,2.26199864393416,3.70792451601561,1.3013942122792,1.76922110389975,1.7794353494215,1.54589062922275,2.42437626567611,0,7.61230072230023,8.16842156572475,1.78819938646014,0.838705871541442,0.599902730993408,1.01656181658452,8.68785708547972,4.11750542536764,6.03140890141749,6.43149984711423,7.92717917724025,7.48036960414416,7.94982189032012,2.64782346010822,1.7416975885413,1.26361379216837,2.52530227063769,1.95180664444056,3.21862946206862,3.06105620669094,3.31550599238573,4.76255494059295,3.71529788826064,4.77878795254617,3.62184719034622,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,1.94633074457919,1.74126083261083,2.26360350048738,4.37875387000685,1.40442637462647,0.772043721344145,1.13665399758237,2.07125772535502,1.64168241986767,2.52086886045421,1.89395788468168,3.14822770795846,1.69693824176116,1.39520366850245,2.68273401399619,2.10177616260905,1.97471819896177,0.32833492815819,1.86458261955468,1.31579988682799,1.75640092232841,1.74468344388483,5.67782861123144,5.45394445610208,1.98251269790279,1.05780226665418,3.19932375802851,1.62565670302307,1.67527699718721,1.00841762311671,1.11189021922435,1.52180500890047,1.89811624617805,1.4822905925161,3.01602250560323,1.79060824837036,2.33956904542944,0.898819408654221,1.29682829924817,2.78797782556114,2.46568271239006,2.85621281524322,4.50830942692322,2.44381593414377,1.55161989734101,3.0158402552837,2.84564417059158,1.91893192373483,1.56998727841375,2.09775178667061,1.48226313543574,1.50160595144485,1.17935397067922,0.674586337154561,1.82574109249653,1.92941727801933,1.2731292589071,3.16465751195892,1.94562272130042,1.37280706594041,1.43768206527355,2.97712758134803,1.87222603868736,3.53610429125956,1.4351793081753,2.8946611281802,2.77129785249907,3.7898282354097,2.44447464663039,2.54617628662782,2.34690248288502,2.1775813467436,1.6663054862021,2.92700471786698,4.57141917907954,3.32197034473162,4.14582398509466,2.45794972073607,2.93564469172023,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,7.70642831941401,11.2523219128515,0.163934945376675,1.26235463602186,2.52406575533005,0.780877488593277,2.58508077279359,3.10659437338318,2.67358408898873,4.52922449262132,2.02405350837447,3.79932615284705,2.37172666767914,8.03303291054518,2.41298144854057,3.73937767701236,3.25773918707152,1.97964147567043,0,2.6705869977048,2.41858845571801,2.64047111658257,1.77181135728464,1.53717573971964,3.87642439752332,2.90826983582004,2.13898427030833,2.21225730555071,2.10837217149998,2.06271086496374,4.08527526904546,2.52085531643834,4.39819524861365,3.21505552547388,3.90148514013002,6.59964625127661,4.77192159746151,5.78483403317739,3.05073220482823,2.96564899209348,0.441056796109924,0.8244312647074,1.13025098687134,2.0506394475573,0.835606408021955,1.31312719796049,1.1659233465194,6.11903496634682,2.05045056957423,2.27025554759545,2.22233432843654,1.69531611304222,1.36694227721025,2.28778173206523,2.37969801991397,1.39951452323658,1.52019971184866,1.90934123603023,3.16335993581135,1.82987520414164,2.37611749807963,0.836353184057875,1.31017538247707,0.944050424693745,2.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| ||
|short_description=p2@Ppp1r3f | |short_description=p2@Ppp1r3f | ||
}} | }} |
Latest revision as of 00:14, 2 October 2015
Short description: | p2@Ppp1r3f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1r3f_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000150787, ENSMUST00000170291_5end |
EntrezGene: | Ppp1r3f |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.18e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.18e-10 | 23 |
neuron | 2.22e-09 | 33 |
neuronal stem cell | 2.22e-09 | 33 |
neuroblast | 2.22e-09 | 33 |
electrically signaling cell | 2.22e-09 | 33 |
electrically responsive cell | 4.79e-07 | 39 |
electrically active cell | 4.79e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.38e-20 | 54 |
neurectoderm | 7.06e-20 | 64 |
neural plate | 7.06e-20 | 64 |
presumptive neural plate | 7.06e-20 | 64 |
central nervous system | 1.26e-19 | 73 |
neural tube | 3.61e-19 | 52 |
neural rod | 3.61e-19 | 52 |
future spinal cord | 3.61e-19 | 52 |
neural keel | 3.61e-19 | 52 |
nervous system | 8.62e-18 | 75 |
brain | 9.30e-17 | 47 |
future brain | 9.30e-17 | 47 |
ectoderm-derived structure | 1.75e-16 | 95 |
ectoderm | 1.75e-16 | 95 |
presumptive ectoderm | 1.75e-16 | 95 |
pre-chordal neural plate | 3.33e-16 | 49 |
regional part of brain | 4.08e-16 | 46 |
ecto-epithelium | 1.45e-15 | 73 |
anterior neural tube | 1.61e-14 | 40 |
regional part of forebrain | 7.05e-14 | 39 |
forebrain | 7.05e-14 | 39 |
future forebrain | 7.05e-14 | 39 |
structure with developmental contribution from neural crest | 4.75e-13 | 92 |
gray matter | 2.74e-12 | 34 |
brain grey matter | 5.26e-10 | 29 |
regional part of telencephalon | 5.26e-10 | 29 |
telencephalon | 5.26e-10 | 29 |
tube | 1.35e-07 | 114 |
anatomical conduit | 1.67e-07 | 122 |