FFCP PHASE1:Hg19::chr12:14927378..14927389,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55766 | |EntrezGene=55766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14456 | |HGNC=14456 | ||
|TSSclassifier=strong | |||
|UniProt=C9JE22 | |UniProt=C9JE22 | ||
|association_with_transcript=-15bp_to_ENST00000228929_5end | |association_with_transcript=-15bp_to_ENST00000228929_5end | ||
|cluster_id=chr12:14927378..14927389,+ | |||
|coexpression_cluster_id=C968 | |||
|description=CAGE_peak_3_at_H2AFJ_5end | |description=CAGE_peak_3_at_H2AFJ_5end | ||
|id=chr12:14927378..14927389,+ | |id=chr12:14927378..14927389,+ | ||
|ontology_enrichment_celltype=CL:0000183!3.20e-11!59;CL:0000680!8.93e-11!57;CL:0000056!8.93e-11!57;CL:0000355!8.93e-11!57;CL:0000192!1.99e-10!42;CL:0000514!1.99e-10!42;CL:0000012!5.44e-10!682;CL:0000003!6.93e-10!722;CL:0000187!7.61e-10!54;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679;CL:0000359!4.67e-09!32;CL:0000222!4.95e-09!119;CL:0000055!1.76e-08!180;CL:0000393!2.08e-08!60;CL:0000211!2.08e-08!60;CL:0002371!2.55e-08!591;CL:0000136!2.25e-07!15;CL:0000144!6.72e-07!625 | |ontology_enrichment_celltype=CL:0000183!3.20e-11!59;CL:0000680!8.93e-11!57;CL:0000056!8.93e-11!57;CL:0000355!8.93e-11!57;CL:0000192!1.99e-10!42;CL:0000514!1.99e-10!42;CL:0000012!5.44e-10!682;CL:0000003!6.93e-10!722;CL:0000187!7.61e-10!54;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679;CL:0000359!4.67e-09!32;CL:0000222!4.95e-09!119;CL:0000055!1.76e-08!180;CL:0000393!2.08e-08!60;CL:0000211!2.08e-08!60;CL:0002371!2.55e-08!591;CL:0000136!2.25e-07!15;CL:0000144!6.72e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.71e-12;13!CL:0000359;8.07e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.47e-11,15;CL:0000359,2.81e-10,32;CL:0000192,3.73e-09,43;CL:0000514,3.73e-09,43;CL:0000680,5.73e-08,58;CL:0000056,5.73e-08,58;CL:0000355,5.73e-08,58;CL:0000187,3.05e-07,55;CL:0000222,5.92e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.21e-11!110;UBERON:0001009!5.49e-11!113;UBERON:0002049!6.34e-11!79;UBERON:0007798!6.34e-11!79;UBERON:0000926!2.28e-10!448;UBERON:0004120!2.28e-10!448;UBERON:0006603!2.28e-10!448;UBERON:0000055!2.80e-10!69;UBERON:0003914!6.71e-10!118;UBERON:0001981!1.60e-09!60;UBERON:0007500!1.60e-09!60;UBERON:0004537!1.60e-09!60;UBERON:0006965!1.60e-09!60;UBERON:0001637!3.13e-09!42;UBERON:0003509!3.13e-09!42;UBERON:0004572!3.13e-09!42;UBERON:0004872!6.97e-09!84;UBERON:0004290!1.23e-08!70;UBERON:0001134!1.80e-08!61;UBERON:0002036!1.80e-08!61;UBERON:0003082!1.80e-08!61;UBERON:0002385!7.74e-08!63;UBERON:0001015!7.74e-08!63;UBERON:0000383!7.74e-08!63;UBERON:0000490!8.84e-08!138;UBERON:0000914!1.06e-07!83;UBERON:0002329!1.06e-07!83;UBERON:0003077!1.06e-07!83;UBERON:0003059!1.06e-07!83;UBERON:0007282!1.06e-07!83;UBERON:0009618!1.06e-07!83;UBERON:0007285!1.06e-07!83;UBERON:0002100!1.18e-07!216;UBERON:0005256!1.82e-07!143;UBERON:0003104!4.51e-07!238;UBERON:0009142!4.51e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.93e-07;9!UBERON:0001557;3.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.44e-10,109;UBERON:0002049,8.36e-10,78;UBERON:0007798,8.36e-10,78;UBERON:0000055,8.40e-10,68;UBERON:0001637,9.73e-10,42;UBERON:0003509,9.73e-10,42;UBERON:0004572,9.73e-10,42;UBERON:0004872,1.96e-09,83;UBERON:0001009,2.75e-09,112;UBERON:0007500,4.83e-09,59;UBERON:0001981,4.83e-09,59;UBERON:0004537,4.83e-09,59;UBERON:0006965,4.83e-09,59;UBERON:0003914,1.28e-08,117;UBERON:0007503,2.21e-07,78;UBERON:0001737,3.10e-07,9;UBERON:0001134,6.16e-07,62;UBERON:0002036,6.16e-07,62;UBERON:0003082,6.16e-07,62 | |||
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| ||
|short_description=p3@H2AFJ | |short_description=p3@H2AFJ | ||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p3@H2AFJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_H2AFJ_5end |
Coexpression cluster: | C968_Mesenchymal_testis_MCF7_mature_Adipocyte_Fibroblast_Alveolar |
Association with transcript: | -15bp_to_ENST00000228929_5end |
EntrezGene: | H2AFJ |
HGNC: | 14456 |
UniProt: | C9JE22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.47e-11 | 15 |
vascular associated smooth muscle cell | 2.81e-10 | 32 |
smooth muscle cell | 3.73e-09 | 43 |
smooth muscle myoblast | 3.73e-09 | 43 |
muscle precursor cell | 5.73e-08 | 58 |
myoblast | 5.73e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.73e-08 | 58 |
muscle cell | 3.05e-07 | 55 |
mesodermal cell | 5.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.44e-10 | 109 |
vasculature | 8.36e-10 | 78 |
vascular system | 8.36e-10 | 78 |
vessel | 8.40e-10 | 68 |
artery | 9.73e-10 | 42 |
arterial blood vessel | 9.73e-10 | 42 |
arterial system | 9.73e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 1.96e-09 | 83 |
circulatory system | 2.75e-09 | 112 |
epithelial tube open at both ends | 4.83e-09 | 59 |
blood vessel | 4.83e-09 | 59 |
blood vasculature | 4.83e-09 | 59 |
vascular cord | 4.83e-09 | 59 |
epithelial tube | 1.28e-08 | 117 |
epithelial vesicle | 2.21e-07 | 78 |
larynx | 3.10e-07 | 9 |
skeletal muscle tissue | 6.16e-07 | 62 |
striated muscle tissue | 6.16e-07 | 62 |
myotome | 6.16e-07 | 62 |