FFCP PHASE1:Mm9::chrX:70905386..70905432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93843 | |EntrezGene=93843 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TYC1,Q9QYK9 | |UniProt=Q3TYC1,Q9QYK9 | ||
|association_with_transcript=0bp_to_NM_001199352,uc009tme.2_5end | |association_with_transcript=0bp_to_NM_001199352,uc009tme.2_5end | ||
|cluster_id=chrX:70905386..70905432,- | |||
|description=CAGE_peak_1_at_Pnck_5end | |description=CAGE_peak_1_at_Pnck_5end | ||
|id=chrX:70905386..70905432,- | |id=chrX:70905386..70905432,- | ||
|ontology_enrichment_celltype=CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000221!3.26e-09!44;CL:0000133!3.26e-09!44;CL:0002319!7.20e-09!43;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000221!3.26e-09!44;CL:0000133!3.26e-09!44;CL:0002319!7.20e-09!43;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.81e-15,23;CL:0000337,6.81e-15,23;CL:0000540,2.50e-12,33;CL:0000047,2.50e-12,33;CL:0000031,2.50e-12,33;CL:0000404,2.50e-12,33;CL:0000221,5.49e-09,44;CL:0000133,5.49e-09,44;CL:0002319,1.23e-08,43;CL:0000393,7.45e-08,39;CL:0000211,7.45e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.54e-26!73;UBERON:0005743!3.54e-26!73;UBERON:0000073!1.41e-24!75;UBERON:0001016!1.41e-24!75;UBERON:0000033!3.05e-24!63;UBERON:0002346!3.15e-24!71;UBERON:0003075!3.15e-24!71;UBERON:0007284!3.15e-24!71;UBERON:0001049!1.29e-23!52;UBERON:0005068!1.29e-23!52;UBERON:0006241!1.29e-23!52;UBERON:0007135!1.29e-23!52;UBERON:0004121!1.12e-22!102;UBERON:0000924!1.12e-22!102;UBERON:0006601!1.12e-22!102;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003056!2.04e-20!49;UBERON:0003080!4.24e-19!40;UBERON:0002780!2.18e-18!39;UBERON:0001890!2.18e-18!39;UBERON:0006240!2.18e-18!39;UBERON:0002020!5.36e-18!34;UBERON:0002791!6.47e-15!29;UBERON:0003528!6.47e-15!29;UBERON:0001893!6.47e-15!29;UBERON:0007811!8.57e-12!86;UBERON:0000153!4.36e-11!94;UBERON:0000956!4.95e-10!21;UBERON:0001869!4.95e-10!21;UBERON:0000203!4.95e-10!21;UBERON:0002619!3.58e-08!17;UBERON:0004111!3.35e-07!122;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!3.54e-26!73;UBERON:0005743!3.54e-26!73;UBERON:0000073!1.41e-24!75;UBERON:0001016!1.41e-24!75;UBERON:0000033!3.05e-24!63;UBERON:0002346!3.15e-24!71;UBERON:0003075!3.15e-24!71;UBERON:0007284!3.15e-24!71;UBERON:0001049!1.29e-23!52;UBERON:0005068!1.29e-23!52;UBERON:0006241!1.29e-23!52;UBERON:0007135!1.29e-23!52;UBERON:0004121!1.12e-22!102;UBERON:0000924!1.12e-22!102;UBERON:0006601!1.12e-22!102;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003056!2.04e-20!49;UBERON:0003080!4.24e-19!40;UBERON:0002780!2.18e-18!39;UBERON:0001890!2.18e-18!39;UBERON:0006240!2.18e-18!39;UBERON:0002020!5.36e-18!34;UBERON:0002791!6.47e-15!29;UBERON:0003528!6.47e-15!29;UBERON:0001893!6.47e-15!29;UBERON:0007811!8.57e-12!86;UBERON:0000153!4.36e-11!94;UBERON:0000956!4.95e-10!21;UBERON:0001869!4.95e-10!21;UBERON:0000203!4.95e-10!21;UBERON:0002619!3.58e-08!17;UBERON:0004111!3.35e-07!122;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-26,73;UBERON:0000073,8.23e-26,54;UBERON:0002346,3.24e-25,64;UBERON:0003075,3.24e-25,64;UBERON:0007284,3.24e-25,64;UBERON:0001016,8.80e-25,75;UBERON:0001049,3.08e-24,52;UBERON:0005068,3.08e-24,52;UBERON:0006241,3.08e-24,52;UBERON:0007135,3.08e-24,52;UBERON:0004121,1.50e-21,95;UBERON:0000924,1.50e-21,95;UBERON:0006601,1.50e-21,95;UBERON:0010314,2.79e-21,92;UBERON:0003056,3.27e-21,49;UBERON:0000955,8.04e-21,47;UBERON:0006238,8.04e-21,47;UBERON:0010371,1.11e-20,73;UBERON:0002616,2.83e-20,46;UBERON:0003080,7.73e-20,40;UBERON:0002780,4.26e-19,39;UBERON:0001890,4.26e-19,39;UBERON:0006240,4.26e-19,39;UBERON:0002020,1.09e-18,34;UBERON:0003528,1.77e-15,29;UBERON:0002791,1.77e-15,29;UBERON:0001893,1.77e-15,29;UBERON:0000956,2.18e-10,21;UBERON:0001869,2.18e-10,21;UBERON:0000203,2.18e-10,21;UBERON:0002619,1.88e-08,17;UBERON:0002021,3.04e-07,10;UBERON:0000411,3.04e-07,10;UBERON:0001950,3.04e-07,10;UBERON:0004111,9.54e-07,122 | |||
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| ||
|short_description=p1@Pnck | |short_description=p1@Pnck | ||
}} | }} |
Latest revision as of 23:46, 1 October 2015
Short description: | p1@Pnck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pnck_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001199352, uc009tme.2_5end |
EntrezGene: | Pnck |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.81e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.81e-15 | 23 |
neuron | 2.50e-12 | 33 |
neuronal stem cell | 2.50e-12 | 33 |
neuroblast | 2.50e-12 | 33 |
electrically signaling cell | 2.50e-12 | 33 |
ectodermal cell | 5.49e-09 | 44 |
neurectodermal cell | 5.49e-09 | 44 |
neural cell | 1.23e-08 | 43 |
electrically responsive cell | 7.45e-08 | 39 |
electrically active cell | 7.45e-08 | 39 |