FFCP PHASE1:Hg19::chr12:12868881..12868924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12868881..12868924,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr12:12868881..12868924,- | |description=CAGE_peak_at_chr12:12868881..12868924,- | ||
|id=chr12:12868881..12868924,- | |id=chr12:12868881..12868924,- | ||
|ontology_enrichment_celltype=CL:0000084!1.38e-18!25;CL:0000827!1.38e-18!25;CL:0000838!2.84e-17!52;CL:0000791!8.53e-17!18;CL:0000789!8.53e-17!18;CL:0002420!8.53e-17!18;CL:0002419!8.53e-17!18;CL:0000790!8.53e-17!18;CL:0000542!1.19e-16!53;CL:0000051!1.19e-16!53;CL:0000625!1.50e-10!11;CL:0002087!1.13e-07!119;CL:0000624!6.09e-07!6 | |ontology_enrichment_celltype=CL:0000084!1.38e-18!25;CL:0000827!1.38e-18!25;CL:0000838!2.84e-17!52;CL:0000791!8.53e-17!18;CL:0000789!8.53e-17!18;CL:0002420!8.53e-17!18;CL:0002419!8.53e-17!18;CL:0000790!8.53e-17!18;CL:0000542!1.19e-16!53;CL:0000051!1.19e-16!53;CL:0000625!1.50e-10!11;CL:0002087!1.13e-07!119;CL:0000624!6.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.98e-44;18!CL:0000789;2.98e-44;18!CL:0002419;2.98e-44;18!CL:0000084;1.51e-38;25!CL:0000625;8.47e-25;11!CL:0000624;2.30e-18;6!CL:0000542;9.10e-15;53!CL:0000898;1.72e-10;3!CL:0000815;1.43e-07;2!CL:0000792;1.43e-07;2!CL:0002677;1.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.00e-44,18;CL:0000789,1.00e-44,18;CL:0002420,1.00e-44,18;CL:0002419,1.00e-44,18;CL:0000790,1.00e-44,18;CL:0000084,4.50e-39,25;CL:0000827,4.50e-39,25;CL:0000838,6.98e-27,52;CL:0000542,2.99e-26,53;CL:0000051,2.99e-26,53;CL:0000625,4.39e-25,11;CL:0000624,1.59e-18,6;CL:0000898,1.70e-10,3;CL:0002087,1.45e-09,115;CL:0002031,4.44e-08,120;CL:0000738,5.41e-08,136;CL:0000815,1.39e-07,2;CL:0000792,1.39e-07,2;CL:0002677,1.39e-07,2;CL:0000893,1.85e-07,2;CL:0002489,1.85e-07,2;CL:0000809,1.85e-07,2;CL:0000808,1.85e-07,2;CL:0000894,1.85e-07,2;CL:0000806,1.85e-07,2;CL:0000807,1.85e-07,2;CL:0000805,1.85e-07,2;CL:0002425,1.85e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.98e-44;18!CL:0000051;9.10e-15;53!CL:0002425;1.93e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.01e-11!15;UBERON:0000179!8.01e-11!15;UBERON:0000463!8.01e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-20;15!UBERON:0000179;1.11e-20;15!UBERON:0000463;1.11e-20;15!UBERON:0002390;1.59e-11;32!UBERON:0002193;2.51e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.33e-20,15;UBERON:0000179,1.33e-20,15;UBERON:0000463,1.33e-20,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0.157421562627358,0,1.53531759238885,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,1.57367816091066,2.35806457649499,2.67281948699362,7.18901930179916,3.58514493296949,6.62826928028627,1.94826728407911,17.7142626447426,8.24896540929544,9.74749136167933,12.9985854607207,13.1934059317445,13.1359941035477,7.72858151637278,4.97430032014527,7.24507714337631,1.77943875794473,2.94294910898684,4.18142095219907,7.3651072753418,4.59864592322305,6.52892146416997,6.07247260846807,4.77848121486145,2.60433381542567,1.90090408889675,2.71035214339991,3.32765189001488,1.24930726552346,1.65744076430812,1.64225599384209,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.491953754172454,0,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,0.985153801009636,1.2937654491571,0.77005821767849,0,0,0,0,0,0,0,0,1.10422342547226,3.50119364741774,0.542530047399471,0,0.178428988797162,0.157702415033935,0.937131319941706,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,1.07857100409308,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.459257792658427,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.580066775656914,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,2.27858874869665,1.19115887728894,1.23408681925858,1.29694662238543,1.08006287447623,0.79312517629427,0.961416640147258,0.962479855263359,0,0,0.28853842595289,0.426851060090485,0.318852545457645,0,0.383010740264733,0.423347165447766,0,0.842391534340376,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0.781552381608161,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0,2.63686198762815,1.90012867315194,0,2.21027132424918,0,0.818149460017238,1.23084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0.583209226766509,0,0,0,0,0.110579259931225,0,0,0.653630781113941,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0.627921025580099,0.166211681900156,0.225595660617181,0,0,0,0.317873157960757,0.210998064528027,0.489698424477443,0,0,0,0.353830258013357,0,1.18608451472249,2.34771483998355,1.77517314159274,0.067401132980677,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.252746318513952,0,0.207376382794494,0,0,0,0,0.284609546029793,0.554698692052555,0.173559738335131,0,0,0.17472666824203,1.0319161948297,0.483781656445426,0.292357268344742,0,0.387956065953678,1.412098027064,0,0,0.19871461170299,0,0.195551382734803,1.04206466326994,0.213452994739353,0,0.288180834308212,0.229073192331831,0,0,0.49701014226173,0,0,0,0.611989305817931,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.202210631562555,0.0984274815147488,0.169346664131569,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,2.11200673038813,0.35857467866569,0,0,0,0,0,0,0,0,0.246277562248017,0,0.79318464064088,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,1.9846640872478,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0.470531639396343,0.468334905806882,0.144921028610825,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr12:12868881..12868924,- | |short_description=p@chr12:12868881..12868924,- | ||
}} | }} |
Latest revision as of 06:38, 24 July 2015
Short description: | p@chr12:12868881..12868924, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12868881..12868924, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.00e-44 | 18 |
alpha-beta T cell | 1.00e-44 | 18 |
immature T cell | 1.00e-44 | 18 |
mature T cell | 1.00e-44 | 18 |
immature alpha-beta T cell | 1.00e-44 | 18 |
T cell | 4.50e-39 | 25 |
pro-T cell | 4.50e-39 | 25 |
lymphoid lineage restricted progenitor cell | 6.98e-27 | 52 |
lymphocyte | 2.99e-26 | 53 |
common lymphoid progenitor | 2.99e-26 | 53 |
CD8-positive, alpha-beta T cell | 4.39e-25 | 11 |
CD4-positive, alpha-beta T cell | 1.59e-18 | 6 |
naive T cell | 1.70e-10 | 3 |
nongranular leukocyte | 1.45e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.44e-08 | 120 |
leukocyte | 5.41e-08 | 136 |
regulatory T cell | 1.39e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.39e-07 | 2 |
naive regulatory T cell | 1.39e-07 | 2 |
thymocyte | 1.85e-07 | 2 |
double negative thymocyte | 1.85e-07 | 2 |
double-positive, alpha-beta thymocyte | 1.85e-07 | 2 |
DN4 thymocyte | 1.85e-07 | 2 |
DN1 thymic pro-T cell | 1.85e-07 | 2 |
DN2 thymocyte | 1.85e-07 | 2 |
DN3 thymocyte | 1.85e-07 | 2 |
immature single positive thymocyte | 1.85e-07 | 2 |
early T lineage precursor | 1.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.33e-20 | 15 |
haemolymphatic fluid | 1.33e-20 | 15 |
organism substance | 1.33e-20 | 15 |