FFCP PHASE1:Hg19::chr12:12510212..12510225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118426 | |EntrezGene=118426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17950 | |HGNC=17950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000543990_5end | |association_with_transcript=-66bp_to_ENST00000543990_5end | ||
|cluster_id=chr12:12510212..12510225,+ | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_6_at_LOH12CR1_5end | |description=CAGE_peak_6_at_LOH12CR1_5end | ||
|id=chr12:12510212..12510225,+ | |id=chr12:12510212..12510225,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.94e-47!140;CL:0000037!4.10e-39!172;CL:0000566!4.10e-39!172;CL:0000988!4.44e-38!182;CL:0002032!9.65e-36!165;CL:0000837!9.65e-36!165;CL:0002087!2.82e-35!119;CL:0002031!2.11e-34!124;CL:0000766!1.66e-26!76;CL:0002057!2.53e-24!42;CL:0000860!3.52e-23!45;CL:0000557!8.92e-23!71;CL:0000763!5.77e-21!112;CL:0000049!5.77e-21!112;CL:0002009!2.81e-20!65;CL:0000839!1.18e-19!70;CL:0002194!4.21e-19!63;CL:0000576!4.21e-19!63;CL:0000040!4.21e-19!63;CL:0000559!4.21e-19!63;CL:0000542!1.11e-13!53;CL:0000051!1.11e-13!53;CL:0000838!3.67e-13!52;CL:0000945!9.00e-09!24;CL:0000826!9.00e-09!24;CL:0000451!5.85e-08!10;CL:0000094!1.20e-07!8;CL:0002393!3.09e-07!9;CL:0002397!3.09e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.94e-47!140;CL:0000037!4.10e-39!172;CL:0000566!4.10e-39!172;CL:0000988!4.44e-38!182;CL:0002032!9.65e-36!165;CL:0000837!9.65e-36!165;CL:0002087!2.82e-35!119;CL:0002031!2.11e-34!124;CL:0000766!1.66e-26!76;CL:0002057!2.53e-24!42;CL:0000860!3.52e-23!45;CL:0000557!8.92e-23!71;CL:0000763!5.77e-21!112;CL:0000049!5.77e-21!112;CL:0002009!2.81e-20!65;CL:0000839!1.18e-19!70;CL:0002194!4.21e-19!63;CL:0000576!4.21e-19!63;CL:0000040!4.21e-19!63;CL:0000559!4.21e-19!63;CL:0000542!1.11e-13!53;CL:0000051!1.11e-13!53;CL:0000838!3.67e-13!52;CL:0000945!9.00e-09!24;CL:0000826!9.00e-09!24;CL:0000451!5.85e-08!10;CL:0000094!1.20e-07!8;CL:0002393!3.09e-07!9;CL:0002397!3.09e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.72e-19;8!CL:0000081;1.71e-16;11!CL:0000624;4.15e-16;6!CL:0000860;1.31e-12;33!CL:0002057;1.31e-12;33!CL:0002087;1.81e-12;104!CL:0000766;8.58e-12;69!CL:0000791;1.32e-10;18!CL:0000789;1.32e-10;18!CL:0002419;1.32e-10;18!CL:0000738;2.43e-10;136!CL:0000576;7.81e-10;48!CL:0002393;9.36e-10;6!CL:0002397;9.36e-10;6!CL:0000542;6.28e-09;53!CL:0000898;8.36e-09;3!CL:0000623;8.46e-09;3!CL:0000226;9.13e-09;3!CL:0000842;9.13e-09;3!CL:0000775;9.49e-09;3!CL:0000473;1.29e-08;39!CL:0000234;1.29e-08;39!CL:0000784;1.06e-07;3!CL:0000767;1.89e-07;3!CL:0000084;4.41e-07;25!CL:0000451;5.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.32e-50,136;CL:0000037,1.36e-39,168;CL:0000988,3.19e-38,177;CL:0002032,1.36e-33,161;CL:0000837,1.36e-33,161;CL:0002087,1.55e-33,115;CL:0002031,1.70e-29,120;CL:0000766,2.97e-27,72;CL:0000860,3.04e-20,42;CL:0002057,3.04e-20,42;CL:0000094,3.72e-19,8;CL:0000763,7.08e-19,108;CL:0000049,7.08e-19,108;CL:0000557,2.00e-18,67;CL:0000473,5.65e-17,48;CL:0000234,5.65e-17,48;CL:0000081,9.83e-17,11;CL:0002009,3.76e-16,61;CL:0000624,4.14e-16,6;CL:0000839,1.15e-15,66;CL:0002194,2.56e-15,59;CL:0000576,2.56e-15,59;CL:0000040,2.56e-15,59;CL:0000559,2.56e-15,59;CL:0000542,6.08e-14,53;CL:0000051,6.08e-14,53;CL:0000838,6.72e-13,52;CL:0000134,1.30e-10,354;CL:0000791,1.33e-10,18;CL:0000789,1.33e-10,18;CL:0002420,1.33e-10,18;CL:0002419,1.33e-10,18;CL:0000790,1.33e-10,18;CL:0002320,4.01e-10,361;CL:0002393,5.18e-09,9;CL:0002397,5.18e-09,9;CL:0000898,8.19e-09,3;CL:0000226,8.62e-09,3;CL:0000623,8.62e-09,3;CL:0000842,8.62e-09,3;CL:0000825,8.62e-09,3;CL:0000775,9.30e-09,3;CL:0000219,2.06e-08,386;CL:0000784,8.41e-08,3;CL:0000767,9.03e-08,3;CL:0000084,4.43e-07,25;CL:0000827,4.43e-07,25;CL:0000451,5.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-14;42!CL:0000790;1.32e-10;18!CL:0000051;6.28e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.81e-25!102;UBERON:0003061!2.81e-25!102;UBERON:0002193!8.40e-23!112;UBERON:0002371!2.06e-19!80;UBERON:0001474!2.39e-18!86;UBERON:0002405!3.47e-14!115;UBERON:0004765!3.18e-13!101;UBERON:0001434!3.18e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.98e-20,98;UBERON:0003061,2.98e-20,98;UBERON:0002193,1.66e-17,108;UBERON:0002371,8.98e-17,76;UBERON:0001474,5.21e-15,82;UBERON:0002405,1.35e-13,93;UBERON:0004765,4.94e-13,90;UBERON:0001434,5.05e-11,100;UBERON:0002384,1.86e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.492603536699674,0.629686250509434,1.96682138424452,1.91914699048606,3.2511385896376,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,2.21598163412751,4.01088894940283,4.77423915574874,0.223915474239924,0,0,0.581592955118259,1.13362783106643,0.727752183563449,0.232429036905685,0.411167888021826,0.929119112685311,0.28769239232215,0.256160706529101,0.709446689665756,1.72372840368309,1.29096936716765,4.06279459783025,1.12945403725563,0.545812300115692,0.898893937780338,1.22433556948361,1.60464513538047,3.83602275479425,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,1.70215567407342,1.86846674698672,1.00499466102697,2.08593167368081,1.95469960234605,1.21079900526674,1.10483290796269,0.316462387440884,1.26753171787165,1.70083439972035,0.419317291016752,2.92054440980887,0.901061357049038,0.803627933485401,2.56511469367124,0.99458338599545,0.91332076882317,0,0.546138611262131,1.77901850772711,0.853460445133014,0.400395987036012,1.14950487990897,0,0.954053754535364,13.6611112586268,12.3319809767897,8.41001101875504,5.28685314316103,1.68152568894461,0.526768169550154,7.08155172409799,14.9344089844683,18.0929319119568,0.334372990781356,6.51844533267181,4.73447805734733,9.74133642039557,1.6711568532776,19.1493839858644,11.5197625183483,4.06205795647523,1.0247305578054,1.8208308658383,0.657751618414705,1.93445012450094,2.31842468588042,5.48660283699624,2.94294910898684,2.09071047609954,0.906474741580529,6.13152789763074,10.3088233644789,4.30133476433155,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,9.67712367478716,16.3138519427939,8.83428863685074,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0.741568885568859,1.29818957461873,0.870648686496336,0.664789802594326,3.57735936458013,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,1.03664057770386,0.288239906833923,1.13618190083742,0,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,7.09310736726938,15.7408129647448,6.03212270514817,0,0,0,0.167516265334349,0.637938751653163,8.98808428736619,5.9832291840805,12.018049889645,0,0,0,0,0,0,0.234282829985426,0,0,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,5.99627275756373,10.5699958401122,10.8862108959513,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.822724546172388,1.29694662238543,0,0,0.106824071127473,0,0.735120647943095,1.11481905075431,0.577076851905779,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0.306806047506464,1.10776324914963,0,0,0.179021174675609,0.511572370226872,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0.167821586975843,0.569261198172555,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,1.18608451472249,0.247127877893006,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0.182454789215666,0.19566461893209,0.485560759068186,0,1.20990716048664,0.61214552326098,0.126373159256976,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.391969589657511,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,0.193978032976839,0.441280633457501,0,0,0.19871461170299,0.4431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| ||
|short_description=p6@LOH12CR1 | |short_description=p6@LOH12CR1 | ||
}} | }} |
Latest revision as of 04:16, 17 September 2015
Short description: | p6@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LOH12CR1_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -66bp_to_ENST00000543990_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.98e-20 | 98 |
blood island | 2.98e-20 | 98 |
hemolymphoid system | 1.66e-17 | 108 |
bone marrow | 8.98e-17 | 76 |
bone element | 5.21e-15 | 82 |
immune system | 1.35e-13 | 93 |
skeletal element | 4.94e-13 | 90 |
skeletal system | 5.05e-11 | 100 |
connective tissue | 1.86e-09 | 371 |