FFCP PHASE1:Hg19::chr17:40913264..40913273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10266 | |EntrezGene=10266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9844 | |HGNC=9844 | ||
|TSSclassifier=strong | |||
|UniProt=O60895 | |UniProt=O60895 | ||
|association_with_transcript=52bp_to_ENST00000253796,NM_005854,uc002ibg.2,uc002ibh.2,uc010cyt.2_5end | |association_with_transcript=52bp_to_ENST00000253796,NM_005854,uc002ibg.2,uc002ibh.2,uc010cyt.2_5end | ||
|cluster_id=chr17:40913264..40913273,+ | |||
|coexpression_cluster_id=C1435 | |||
|description=CAGE_peak_6_at_RAMP2_5end | |description=CAGE_peak_6_at_RAMP2_5end | ||
|id=chr17:40913264..40913273,+ | |id=chr17:40913264..40913273,+ | ||
|ontology_enrichment_celltype=CL:0000115!2.34e-09!35;CL:0002078!2.16e-08!44;CL:0002139!2.29e-08!24;CL:0000213!4.07e-07!57;CL:0000215!4.07e-07!57 | |ontology_enrichment_celltype=CL:0000115!2.34e-09!35;CL:0002078!2.16e-08!44;CL:0002139!2.29e-08!24;CL:0000213!4.07e-07!57;CL:0000215!4.07e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.36e-13;36!CL:0002139;1.67e-09;24!CL:0002138;3.96e-09;6!CL:0002262;3.73e-08;2!CL:1000398;3.73e-08;2!CL:0002078;2.52e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.82e-15,36;CL:0002078,3.13e-11,45;CL:0002139,1.53e-09,24;CL:0000213,2.62e-09,58;CL:0000215,2.62e-09,58;CL:0005020,6.66e-09,6;CL:0002138,6.66e-09,6;CL:0005022,6.66e-09,6;CL:0002262,3.76e-08,2;CL:1000398,3.76e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.76e-11;7!CL:0005022;3.96e-09;6!UBERON:0006965;4.86e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.65e-16!115;UBERON:0000477!2.14e-14!286;UBERON:0004111!1.02e-13!241;UBERON:0000025!1.33e-12!194;UBERON:0000468!1.23e-11!659;UBERON:0000483!3.21e-11!309;UBERON:0000119!9.43e-11!312;UBERON:0003914!2.62e-09!118;UBERON:0000480!2.95e-09!626;UBERON:0000467!4.61e-09!625;UBERON:0000055!1.57e-08!69;UBERON:0002049!3.74e-08!79;UBERON:0007798!3.74e-08!79;UBERON:0000922!4.07e-08!612;UBERON:0000481!1.19e-07!347;UBERON:0004872!6.65e-07!84;UBERON:0001981!7.10e-07!60;UBERON:0007500!7.10e-07!60;UBERON:0004537!7.10e-07!60;UBERON:0006965!7.10e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.73e-08;2!UBERON:0003497;3.73e-08;2!UBERON:0003909;3.73e-08;2!UBERON:0003835;3.73e-08;2!UBERON:0002465;5.40e-08;10!UBERON:0001473;7.79e-07;8!UBERON:0004536;7.79e-07;8!UBERON:0006558;7.79e-07;8!UBERON:0000055;8.26e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.59e-09,68;UBERON:0001281,3.76e-08,2;UBERON:0003497,3.76e-08,2;UBERON:0003909,3.76e-08,2;UBERON:0003835,3.76e-08,2;UBERON:0002465,7.29e-08,10;UBERON:0002049,8.42e-08,78;UBERON:0007798,8.42e-08,78;UBERON:0004872,4.69e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,1.26343974685366,2.35067065379855,0.245733936501509,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0.39752481473341,2.58070378531837,0.347140501607594,0.56530794192401,0,0.825354125820202,0,0,0.71153252537342,1.00416183829401,1.61131726843659,0.760272105718513,2.68468263302986,0,4.0507097394088,0.625098097988558,1.79623498100936,0.900891843866578,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0.300091096084402,0.515262646192195,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,4.42893272774789,4.20725321410337,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0.231860809950154,0,3.46479474626577,2.31492756288305,2.28304982681518,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.604297247958111,0.200506470303285,0,0,0,0.393373244878272,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,4.54933536283586,0.510281115829547,1.0795795805107,16.9649977959318,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,1.10273068709225,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0.242721043499027,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0.422250816255987,1.39473591775749,0.552567831062295,0,0.20453736500431,0.246169610922139,0,0.0898683511473268,0,0,0.591860433821602,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,1.53900517007594,0,0,0,0.977826347298073,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.707660516026713,1.83309043480088,0,0,0,0.471807930864739,1.60515529459758,0,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,1.51647791108371,0.150323419414493,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,0.387956065953678,0,2.71176888936639,0,0.19871461170299,0.50648636764703,0.195551382734803,0.0801588202515337,1.49417096317547,0.19980960958213,0.432271251462318,0,1.88754497648161,0,0.248505071130865,0,0,0,0,0,0,0.273810757783986,0,0,0,2.23425921017803,0.687481272035051,0.717873024576814,0,0,0.89268582976749,1.67958681216816,0,0,0.315132729228895,0,0.404421263125109,0.492137407573744,0,0.795229689809303,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0.709251365692784,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,1.13312091520126,0.439656701034247,0,0.129282956361551,0,0,0,2.13574825135389,2.20086027139532,2.07119527673598,1.48849806543585,0.197611631897944,0,0,0,0.2506898940227,0.919036730290385,2.29510841496863,0.157054096250234,0,0.610131324509816,0,0.573409195690071,0.110929051536852,0.620964029413834,0.276697269872462,0,1.06154382279153,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.300515217994437,0,0.813741466409323,0,0.429642228169954,0,0,0,0,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,1.85280868296583,0.219284049578707,0.706756583783524,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,1.27894371303652,0.754773679776773,0.943595651135378,0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| ||
|short_description=p6@RAMP2 | |short_description=p6@RAMP2 | ||
}} | }} |
Latest revision as of 16:01, 24 September 2015
Short description: | p6@RAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAMP2_5end |
Coexpression cluster: | C1435_Renal_lung_retina_Mesenchymal_placenta_Hepatic_uterus |
Association with transcript: | 52bp_to_ENST00000253796, NM_005854, uc002ibg.2, uc002ibh.2, uc010cyt.2_5end |
EntrezGene: | RAMP2 |
HGNC: | 9844 |
UniProt: | O60895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.82e-15 | 36 |
meso-epithelial cell | 3.13e-11 | 45 |
endothelial cell of vascular tree | 1.53e-09 | 24 |
lining cell | 2.62e-09 | 58 |
barrier cell | 2.62e-09 | 58 |
lymphangioblast | 6.66e-09 | 6 |
endothelial cell of lymphatic vessel | 6.66e-09 | 6 |
vascular lymphangioblast | 6.66e-09 | 6 |
endothelial cell of sinusoid | 3.76e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.76e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.59e-09 | 68 |
hepatic sinusoid | 3.76e-08 | 2 |
abdomen blood vessel | 3.76e-08 | 2 |
sinusoid | 3.76e-08 | 2 |
abdominal segment blood vessel | 3.76e-08 | 2 |
lymphoid system | 7.29e-08 | 10 |
vasculature | 8.42e-08 | 78 |
vascular system | 8.42e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 4.69e-07 | 83 |