FFCP PHASE1:Hg19::chr12:124875522..124875536,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124875522..124875536,+ | |||
|coexpression_cluster_id=C2196 | |||
|description=CAGE_peak_at_chr12:124875522..124875536,+ | |description=CAGE_peak_at_chr12:124875522..124875536,+ | ||
|id=chr12:124875522..124875536,+ | |id=chr12:124875522..124875536,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.16e-94!42;CL:0000860!4.44e-87!45;CL:0000766!1.25e-86!76;CL:0002009!1.28e-79!65;CL:0002194!2.18e-75!63;CL:0000576!2.18e-75!63;CL:0000040!2.18e-75!63;CL:0000559!2.18e-75!63;CL:0000557!9.20e-75!71;CL:0000839!1.84e-69!70;CL:0000738!1.34e-59!140;CL:0000763!1.20e-58!112;CL:0000049!1.20e-58!112;CL:0000037!2.44e-45!172;CL:0000566!2.44e-45!172;CL:0002087!8.88e-45!119;CL:0002031!5.44e-42!124;CL:0000988!6.58e-42!182;CL:0002032!3.17e-39!165;CL:0000837!3.17e-39!165;CL:0002393!3.26e-22!9;CL:0002397!3.26e-22!9;CL:0000134!1.64e-17!358;CL:0002320!7.78e-17!365;CL:0000094!8.69e-16!8;CL:0000219!3.75e-15!390;CL:0000048!1.46e-13!430;CL:0000034!3.10e-13!444;CL:0000723!3.99e-13!436;CL:0000081!4.12e-11!11;CL:0000840!4.41e-09!5;CL:0001029!4.41e-09!5;CL:0000451!6.33e-09!10;CL:0000767!8.04e-09!3;CL:0000842!1.70e-08!3;CL:0000875!5.16e-08!3;CL:0002396!5.16e-08!3;CL:0000063!2.11e-07!578;CL:0002371!9.39e-07!591 | |ontology_enrichment_celltype=CL:0002057!3.16e-94!42;CL:0000860!4.44e-87!45;CL:0000766!1.25e-86!76;CL:0002009!1.28e-79!65;CL:0002194!2.18e-75!63;CL:0000576!2.18e-75!63;CL:0000040!2.18e-75!63;CL:0000559!2.18e-75!63;CL:0000557!9.20e-75!71;CL:0000839!1.84e-69!70;CL:0000738!1.34e-59!140;CL:0000763!1.20e-58!112;CL:0000049!1.20e-58!112;CL:0000037!2.44e-45!172;CL:0000566!2.44e-45!172;CL:0002087!8.88e-45!119;CL:0002031!5.44e-42!124;CL:0000988!6.58e-42!182;CL:0002032!3.17e-39!165;CL:0000837!3.17e-39!165;CL:0002393!3.26e-22!9;CL:0002397!3.26e-22!9;CL:0000134!1.64e-17!358;CL:0002320!7.78e-17!365;CL:0000094!8.69e-16!8;CL:0000219!3.75e-15!390;CL:0000048!1.46e-13!430;CL:0000034!3.10e-13!444;CL:0000723!3.99e-13!436;CL:0000081!4.12e-11!11;CL:0000840!4.41e-09!5;CL:0001029!4.41e-09!5;CL:0000451!6.33e-09!10;CL:0000767!8.04e-09!3;CL:0000842!1.70e-08!3;CL:0000875!5.16e-08!3;CL:0002396!5.16e-08!3;CL:0000063!2.11e-07!578;CL:0002371!9.39e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-93;33!CL:0002057;1.35e-93;33!CL:0000576;2.87e-71;48!CL:0000473;5.24e-62;39!CL:0000234;5.24e-62;39!CL:0000766;4.20e-51;69!CL:0000094;1.76e-25;8!CL:0002393;2.33e-25;6!CL:0002397;2.33e-25;6!CL:0000763;4.04e-21;100!CL:0000081;3.03e-18;11!CL:0002087;2.12e-17;104!CL:0000738;1.30e-14;136!CL:0000767;1.33e-13;3!CL:0000226;5.62e-13;3!CL:0000842;5.62e-13;3!CL:0000875;3.06e-12;3!CL:0002396;3.06e-12;3!CL:0000771;6.62e-10;2!CL:0000988;2.11e-08;177!CL:0000219;2.21e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-134,42;CL:0002057,1.10e-134,42;CL:0000473,9.23e-117,48;CL:0000234,9.23e-117,48;CL:0000766,6.17e-107,72;CL:0002009,1.80e-93,61;CL:0002194,1.16e-91,59;CL:0000576,1.16e-91,59;CL:0000040,1.16e-91,59;CL:0000559,1.16e-91,59;CL:0000557,1.93e-84,67;CL:0000839,3.60e-81,66;CL:0000763,6.05e-72,108;CL:0000049,6.05e-72,108;CL:0000738,6.91e-64,136;CL:0002087,2.48e-51,115;CL:0000037,5.81e-50,168;CL:0000988,6.04e-47,177;CL:0002032,2.79e-45,161;CL:0000837,2.79e-45,161;CL:0002031,1.53e-43,120;CL:0002393,8.57e-36,9;CL:0002397,8.57e-36,9;CL:0000094,2.07e-25,8;CL:0000134,1.02e-19,354;CL:0002320,3.84e-19,361;CL:0000081,3.41e-18,11;CL:0000219,4.06e-17,386;CL:0000048,1.22e-14,427;CL:0000723,2.69e-14,433;CL:0000034,7.44e-14,441;CL:0000767,1.42e-13,3;CL:0000226,4.88e-13,3;CL:0000842,4.88e-13,3;CL:0000875,3.06e-12,3;CL:0002396,3.06e-12,3;CL:0000771,6.63e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-93;42!CL:0000049;1.41e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.27e-65!80;UBERON:0001474!6.04e-62!86;UBERON:0002390!2.23e-57!102;UBERON:0003061!2.23e-57!102;UBERON:0002193!6.34e-51!112;UBERON:0004765!1.22e-50!101;UBERON:0001434!1.22e-50!101;UBERON:0002405!7.84e-41!115;UBERON:0002204!9.79e-29!167;UBERON:0003081!2.62e-22!216;UBERON:0002384!1.05e-16!375;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!8.27e-65!80;UBERON:0001474!6.04e-62!86;UBERON:0002390!2.23e-57!102;UBERON:0003061!2.23e-57!102;UBERON:0002193!6.34e-51!112;UBERON:0004765!1.22e-50!101;UBERON:0001434!1.22e-50!101;UBERON:0002405!7.84e-41!115;UBERON:0002204!9.79e-29!167;UBERON:0003081!2.62e-22!216;UBERON:0002384!1.05e-16!375;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.57e-73,76;UBERON:0001474,1.43e-67,82;UBERON:0002390,4.05e-65,98;UBERON:0003061,4.05e-65,98;UBERON:0004765,7.57e-61,90;UBERON:0002405,1.28e-58,93;UBERON:0002193,2.69e-58,108;UBERON:0001434,6.14e-54,100;UBERON:0002204,7.52e-29,167;UBERON:0003081,8.27e-27,203;UBERON:0002384,2.34e-18,371;UBERON:0000926,6.17e-15,315;UBERON:0004120,6.17e-15,315;UBERON:0006603,6.17e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,3.0706351847777,8.82451902901633,0,0,0,0,0,0,8.86392653651004,6.61796676651468,4.12320654360118,0.223915474239924,0,0,2.18097358169347,2.26725566213286,1.94067248950253,1.39457422143411,2.46700732813095,1.54853185447552,1.7261543539329,2.56160706529101,2.83778675866302,1.37898272294647,1.93645405075148,5.41705946377367,4.70605848856512,1.91034305040492,1.57306439111559,1.83650335422542,1.28371610830437,5.11469700639233,0.989553900560148,1.39624560335142,3.83602275479425,0.580418477257168,1.13477044938228,2.4912889959823,2.26123798731069,2.08593167368081,3.04064382587163,1.81619850790011,1.84138817993782,0.632924774881769,5.49263744411049,7.01594189884644,5.03180749220102,5.72876018847125,2.10247649978109,1.92870704036496,3.99017841237748,1.39241674039363,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,5.99205619157746,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,7.98142543028882,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,3.0706351847777,8.82451902901633,0,0,0,0,0,0,8.86392653651004,6.61796676651468,4.12320654360118,0.223915474239924,0,0,2.18097358169347,2.26725566213286,1.94067248950253,1.39457422143411,2.46700732813095,1.54853185447552,1.7261543539329,2.56160706529101,2.83778675866302,1.37898272294647,1.93645405075148,5.41705946377367,4.70605848856512,1.91034305040492,1.57306439111559,1.83650335422542,1.28371610830437,5.11469700639233,0.989553900560148,1.39624560335142,3.83602275479425,0.580418477257168,1.13477044938228,2.4912889959823,2.26123798731069,2.08593167368081,3.04064382587163,1.81619850790011,1.84138817993782,0.632924774881769,5.49263744411049,7.01594189884644,5.03180749220102,5.72876018847125,2.10247649978109,1.92870704036496,3.99017841237748,1.39241674039363,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,5.99205619157746,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,7.98142543028882,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:124875522..124875536,+ | |short_description=p@chr12:124875522..124875536,+ | ||
}} | }} |
Latest revision as of 06:23, 24 July 2015
Short description: | p@chr12:124875522..124875536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124875522..124875536, + |
Coexpression cluster: | C2196_Basophils_Eosinophils_CD14_Peripheral_Neutrophils_immature_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.57e-73 | 76 |
bone element | 1.43e-67 | 82 |
hematopoietic system | 4.05e-65 | 98 |
blood island | 4.05e-65 | 98 |
skeletal element | 7.57e-61 | 90 |
immune system | 1.28e-58 | 93 |
hemolymphoid system | 2.69e-58 | 108 |
skeletal system | 6.14e-54 | 100 |
musculoskeletal system | 7.52e-29 | 167 |
lateral plate mesoderm | 8.27e-27 | 203 |
connective tissue | 2.34e-18 | 371 |
mesoderm | 6.17e-15 | 315 |
mesoderm-derived structure | 6.17e-15 | 315 |
presumptive mesoderm | 6.17e-15 | 315 |