FFCP PHASE1:Hg19::chr12:124457400..124457420,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80212 | |EntrezGene=80212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29563 | |HGNC=29563 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXK2 | |UniProt=F5GXK2 | ||
|association_with_transcript=-22bp_to_ENST00000545037_5end | |association_with_transcript=-22bp_to_ENST00000545037_5end | ||
|cluster_id=chr12:124457400..124457420,- | |||
|description=CAGE_peak_5_at_CCDC92_5end | |description=CAGE_peak_5_at_CCDC92_5end | ||
|id=chr12:124457400..124457420,- | |id=chr12:124457400..124457420,- | ||
|ontology_enrichment_celltype=CL:0000222!3.12e-08!119;CL:0002078!3.21e-08!44;CL:0000115!1.53e-07!35 | |ontology_enrichment_celltype=CL:0000222!3.12e-08!119;CL:0002078!3.21e-08!44;CL:0000115!1.53e-07!35 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,2.82e-08,45;CL:0000115,7.33e-08,36;CL:0000222,7.62e-07,121;CL:0000213,8.82e-07,58;CL:0000215,8.82e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!7.62e-12!194;UBERON:0001893!1.65e-11!34;UBERON:0002020!1.75e-11!34;UBERON:0003528!1.75e-11!34;UBERON:0001869!1.86e-11!32;UBERON:0004111!3.86e-11!241;UBERON:0002791!4.38e-11!33;UBERON:0001049!5.36e-11!57;UBERON:0005068!5.36e-11!57;UBERON:0006241!5.36e-11!57;UBERON:0007135!5.36e-11!57;UBERON:0000477!1.33e-10!286;UBERON:0002780!1.98e-10!41;UBERON:0001890!1.98e-10!41;UBERON:0006240!1.98e-10!41;UBERON:0002616!2.92e-10!59;UBERON:0003080!5.35e-10!42;UBERON:0002619!1.95e-09!22;UBERON:0007023!1.95e-09!115;UBERON:0001950!4.40e-09!20;UBERON:0000119!6.75e-09!312;UBERON:0000956!7.73e-09!25;UBERON:0000203!7.73e-09!25;UBERON:0000483!8.14e-09!309;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0001017!5.75e-08!82;UBERON:0000073!9.61e-08!94;UBERON:0001016!9.61e-08!94;UBERON:0005743!1.93e-07!86;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0001009!4.42e-07!113;UBERON:0002346!8.76e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.96e-10;32!UBERON:0001893;4.25e-10;34!UBERON:0002791;8.75e-10;32!UBERON:0003528;9.20e-10;34!UBERON:0002020;9.20e-10;34!UBERON:0002619;1.79e-09;22!UBERON:0001950;3.03e-09;20!UBERON:0000956;7.01e-09;25!UBERON:0000203;7.01e-09;25!UBERON:0002780;2.49e-08;41!UBERON:0001890;2.49e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.86e-12,56;UBERON:0005068,3.86e-12,56;UBERON:0006241,3.86e-12,56;UBERON:0007135,3.86e-12,56;UBERON:0000073,5.59e-12,53;UBERON:0002616,5.59e-12,53;UBERON:0001893,6.59e-12,34;UBERON:0003528,7.01e-12,34;UBERON:0002020,7.01e-12,34;UBERON:0001869,7.68e-12,32;UBERON:0000025,2.10e-11,192;UBERON:0002791,3.33e-11,32;UBERON:0002780,4.34e-11,41;UBERON:0001890,4.34e-11,41;UBERON:0003080,4.34e-11,41;UBERON:0006240,4.34e-11,41;UBERON:0007023,7.18e-10,114;UBERON:0004111,7.38e-10,240;UBERON:0002619,1.01e-09,22;UBERON:0001950,2.47e-09,20;UBERON:0001016,5.00e-09,89;UBERON:0000956,5.10e-09,25;UBERON:0000203,5.10e-09,25;UBERON:0000955,5.12e-09,68;UBERON:0006238,5.12e-09,68;UBERON:0001017,6.76e-09,81;UBERON:0003056,1.03e-07,61;UBERON:0000119,2.55e-07,309;UBERON:0000483,2.60e-07,306;UBERON:0003075,3.12e-07,82;UBERON:0007284,3.12e-07,82;UBERON:0010314,6.97e-07,132 | |||
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| ||
|short_description=p5@CCDC92 | |short_description=p5@CCDC92 | ||
}} | }} |
Latest revision as of 03:13, 17 September 2015
Short description: | p5@CCDC92 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC92_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000545037_5end |
EntrezGene: | CCDC92 |
HGNC: | 29563 |
UniProt: | F5GXK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 2.82e-08 | 45 |
endothelial cell | 7.33e-08 | 36 |
mesodermal cell | 7.62e-07 | 121 |
lining cell | 8.82e-07 | 58 |
barrier cell | 8.82e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.86e-12 | 56 |
neural rod | 3.86e-12 | 56 |
future spinal cord | 3.86e-12 | 56 |
neural keel | 3.86e-12 | 56 |
regional part of nervous system | 5.59e-12 | 53 |
regional part of brain | 5.59e-12 | 53 |
telencephalon | 6.59e-12 | 34 |
brain grey matter | 7.01e-12 | 34 |
gray matter | 7.01e-12 | 34 |
cerebral hemisphere | 7.68e-12 | 32 |
tube | 2.10e-11 | 192 |
regional part of telencephalon | 3.33e-11 | 32 |
regional part of forebrain | 4.34e-11 | 41 |
forebrain | 4.34e-11 | 41 |
anterior neural tube | 4.34e-11 | 41 |
future forebrain | 4.34e-11 | 41 |
adult organism | 7.18e-10 | 114 |
anatomical conduit | 7.38e-10 | 240 |
regional part of cerebral cortex | 1.01e-09 | 22 |
neocortex | 2.47e-09 | 20 |
nervous system | 5.00e-09 | 89 |
cerebral cortex | 5.10e-09 | 25 |
pallium | 5.10e-09 | 25 |
brain | 5.12e-09 | 68 |
future brain | 5.12e-09 | 68 |
central nervous system | 6.76e-09 | 81 |
pre-chordal neural plate | 1.03e-07 | 61 |
cell layer | 2.55e-07 | 309 |
epithelium | 2.60e-07 | 306 |
neural plate | 3.12e-07 | 82 |
presumptive neural plate | 3.12e-07 | 82 |
structure with developmental contribution from neural crest | 6.97e-07 | 132 |