FFCP PHASE1:Hg19::chr17:39775813..39775820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39775813..39775820,- | |||
|description=CAGE_peak_at_chr17:39775813..39775820,- | |description=CAGE_peak_at_chr17:39775813..39775820,- | ||
|id=chr17:39775813..39775820,- | |id=chr17:39775813..39775820,- | ||
|ontology_enrichment_celltype=CL:0002076!5.16e-16!43;CL:0000223!5.03e-11!59;CL:0002368!1.05e-10!13;CL:0000622!1.68e-10!5;CL:0000150!5.93e-10!9;CL:0000066!4.31e-09!254;CL:0000154!7.92e-09!6;CL:0002231!2.12e-08!3;CL:0002623!3.54e-08!3;CL:0000167!9.25e-07!1;CL:0000164!9.25e-07!1;CL:0000502!9.25e-07!1;CL:0000172!9.25e-07!1;CL:0000173!9.25e-07!1;CL:0002351!9.25e-07!1 | |ontology_enrichment_celltype=CL:0002076!5.16e-16!43;CL:0000223!5.03e-11!59;CL:0002368!1.05e-10!13;CL:0000622!1.68e-10!5;CL:0000150!5.93e-10!9;CL:0000066!4.31e-09!254;CL:0000154!7.92e-09!6;CL:0002231!2.12e-08!3;CL:0002623!3.54e-08!3;CL:0000167!9.25e-07!1;CL:0000164!9.25e-07!1;CL:0000502!9.25e-07!1;CL:0000172!9.25e-07!1;CL:0000173!9.25e-07!1;CL:0002351!9.25e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002328;9.45e-18;3!CL:0002368;2.63e-16;13!CL:0000197;1.44e-09;6!CL:0000098;1.44e-09;6!CL:0002167;1.44e-09;6!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.12e-17,3;CL:0002368,2.84e-16,13;CL:0000197,1.44e-09,6;CL:0000098,1.44e-09,6;CL:0002167,1.44e-09,6;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!7.82e-07!1;DOID:3149!7.82e-07!1;DOID:4430!9.25e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-09!169;UBERON:0000925!1.66e-09!169;UBERON:0006595!1.66e-09!169;UBERON:0000161!1.07e-08!35;UBERON:0001004!1.36e-08!72;UBERON:0000065!6.21e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.45e-18;3!UBERON:0002031;9.45e-18;3!UBERON:0002185;3.26e-11;5!UBERON:0000485;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.12e-17,3;UBERON:0002031,1.12e-17,3;UBERON:0002185,3.60e-11,5;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p@chr17:39775813..39775820,- | |short_description=p@chr17:39775813..39775820,- | ||
}} | }} |
Latest revision as of 16:46, 25 July 2015
Short description: | p@chr17:39775813..39775820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39775813..39775820, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.12e-17 | 3 |
respiratory epithelial cell | 2.84e-16 | 13 |
receptor cell | 1.44e-09 | 6 |
sensory epithelial cell | 1.44e-09 | 6 |
olfactory epithelial cell | 1.44e-09 | 6 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.12e-17 | 3 |
epithelium of bronchus | 1.12e-17 | 3 |
bronchus | 3.60e-11 | 5 |
simple columnar epithelium | 8.85e-07 | 9 |