FFCP PHASE1:Hg19::chr17:39254391..39254395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728224 | |EntrezGene=728224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17230 | |HGNC=17230 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYQ9 | |UniProt=Q9BYQ9 | ||
|association_with_transcript=0bp_to_ENST00000333822_5end | |association_with_transcript=0bp_to_ENST00000333822_5end | ||
|cluster_id=chr17:39254391..39254395,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP4-8_5end | |description=CAGE_peak_1_at_KRTAP4-8_5end | ||
|id=chr17:39254391..39254395,- | |id=chr17:39254391..39254395,- | ||
|ontology_enrichment_celltype=CL:0000055!4.01e-08!180;CL:0002620!4.29e-08!23;CL:0000057!1.71e-07!75 | |ontology_enrichment_celltype=CL:0000055!4.01e-08!180;CL:0002620!4.29e-08!23;CL:0000057!1.71e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002556;5.68e-12;6!CL:0002262;1.64e-09;2!CL:1000398;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,6.00e-12,6;CL:0002262,1.57e-09,2;CL:1000398,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.08e-18;1!UBERON:0008814;8.69e-10;2!UBERON:0010056;8.69e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.12e-17;1!DOID:0060084;9.37e-07;3!DOID:127;9.37e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.37e-18,1;DOID:0060084,8.62e-07,3;DOID:127,8.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.16e-07!95;UBERON:0001444!7.90e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.66e-18;1!UBERON:0002426;4.08e-18;1!UBERON:0003831;4.08e-18;1!UBERON:0003898;4.08e-18;1!UBERON:0004830;4.08e-18;1!UBERON:0003830;4.08e-18;1!UBERON:0005175;4.08e-18;1!UBERON:0001774;4.08e-18;1!UBERON:0001103;4.08e-18;1!UBERON:0001758;5.68e-12;6!UBERON:0003672;5.68e-12;6!UBERON:0003129;2.13e-10;7!UBERON:0005090;9.87e-10;2!UBERON:0001630;9.87e-10;2!UBERON:0001281;1.64e-09;2!UBERON:0003497;1.64e-09;2!UBERON:0003909;1.64e-09;2!UBERON:0003835;1.64e-09;2!UBERON:0001723;6.14e-07;3!UBERON:0001033;6.14e-07;3!UBERON:0011137;6.16e-07;11!UBERON:0010323;6.16e-07;11!UBERON:0001280;9.37e-07;3!UBERON:0004647;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.66e-18,1;UBERON:0002426,4.44e-18,1;UBERON:0003831,4.44e-18,1;UBERON:0003898,4.44e-18,1;UBERON:0004830,4.44e-18,1;UBERON:0003830,4.44e-18,1;UBERON:0005175,4.44e-18,1;UBERON:0001774,4.44e-18,1;UBERON:0001103,4.44e-18,1;UBERON:0010084,4.44e-18,1;UBERON:0001758,6.00e-12,6;UBERON:0003672,6.00e-12,6;UBERON:0003129,2.24e-10,7;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0001281,1.57e-09,2;UBERON:0003497,1.57e-09,2;UBERON:0003909,1.57e-09,2;UBERON:0003835,1.57e-09,2;UBERON:0001723,6.14e-07,3;UBERON:0001033,6.14e-07,3;UBERON:0010056,6.14e-07,3;UBERON:0010323,6.35e-07,11;UBERON:0001280,9.12e-07,3;UBERON:0004647,9.12e-07,3;UBERON:0005171,9.12e-07,3 | |||
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| ||
|short_description=p1@KRTAP4-8 | |short_description=p1@KRTAP4-8 | ||
}} | }} |
Latest revision as of 04:32, 20 September 2015
Short description: | p1@KRTAP4-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-8_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_ENST00000333822_5end |
EntrezGene: | KRTAP4-8 |
HGNC: | 17230 |
UniProt: | Q9BYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 6.00e-12 | 6 |
endothelial cell of sinusoid | 1.57e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 2.66e-18 | 1 |
chest muscle | 4.44e-18 | 1 |
respiratory system muscle | 4.44e-18 | 1 |
skeletal muscle of trunk | 4.44e-18 | 1 |
respiratory system skeletal muscle | 4.44e-18 | 1 |
thoracic segment muscle | 4.44e-18 | 1 |
chest organ | 4.44e-18 | 1 |
muscle of trunk | 4.44e-18 | 1 |
diaphragm | 4.44e-18 | 1 |
future diaphragm | 4.44e-18 | 1 |
periodontium | 6.00e-12 | 6 |
dentition | 6.00e-12 | 6 |
skull | 2.24e-10 | 7 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
hepatic sinusoid | 1.57e-09 | 2 |
abdomen blood vessel | 1.57e-09 | 2 |
sinusoid | 1.57e-09 | 2 |
abdominal segment blood vessel | 1.57e-09 | 2 |
tongue | 6.14e-07 | 3 |
gustatory system | 6.14e-07 | 3 |
future tongue | 6.14e-07 | 3 |
cranial skeletal system | 6.35e-07 | 11 |
liver parenchyma | 9.12e-07 | 3 |
liver lobule | 9.12e-07 | 3 |
hepatic duct | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.37e-18 | 1 |
cell type benign neoplasm | 8.62e-07 | 3 |
leiomyoma | 8.62e-07 | 3 |