FFCP PHASE1:Hg19::chr17:38978422..38978432,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3858 | |EntrezGene=3858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6413 | |HGNC=6413 | ||
|TSSclassifier=strong | |||
|UniProt=P13645 | |UniProt=P13645 | ||
|association_with_transcript=18bp_to_M19156_5end | |association_with_transcript=18bp_to_M19156_5end | ||
|cluster_id=chr17:38978422..38978432,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_12_at_KRT10_5end | |description=CAGE_peak_12_at_KRT10_5end | ||
|id=chr17:38978422..38978432,- | |id=chr17:38978422..38978432,- | ||
|ontology_enrichment_celltype=CL:0000622!1.66e-31!5;CL:0002623!5.07e-30!3;CL:0000154!2.58e-26!6;CL:0000150!1.21e-17!9;CL:0002150!2.82e-13!3;CL:0000861!2.82e-13!3 | |ontology_enrichment_celltype=CL:0000622!1.66e-31!5;CL:0002623!5.07e-30!3;CL:0000154!2.58e-26!6;CL:0000150!1.21e-17!9;CL:0002150!2.82e-13!3;CL:0000861!2.82e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.51e-51;5!CL:0000154;6.03e-43;6!CL:0002623;8.37e-39;3!CL:0000150;5.91e-29;9!CL:0001014;1.78e-15;2!CL:0001016;1.78e-15;2!CL:0000317;2.55e-15;2!CL:1000448;2.55e-15;2!CL:0002308;2.55e-15;2!CL:0002140;2.55e-15;2!CL:0000151;8.84e-09;36!CL:0000453;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.73e-51,5;CL:0000154,6.48e-43,6;CL:0002623,8.37e-39,3;CL:0000150,6.20e-29,9;CL:0001014,1.78e-15,2;CL:0001016,1.78e-15,2;CL:0000317,2.74e-15,2;CL:1000448,2.74e-15,2;CL:0002308,2.74e-15,2;CL:0002140,2.74e-15,2;CL:0000151,8.54e-08,36;CL:0000453,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.37e-29;1 | |||
|ontology_enrichment_disease=DOID:3151!8.22e-11!1;DOID:3149!8.22e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000078!1.02e-18!18;UBERON:0000166!5.45e-16!21;UBERON:0003408!1.13e-15!10;UBERON:0001044!2.46e-15!6;UBERON:0003293!2.46e-15!6;UBERON:0003294!2.46e-15!6;UBERON:0010047!2.46e-15!6;UBERON:0000167!2.46e-15!6;UBERON:0001042!4.37e-15!10;UBERON:0009145!4.37e-15!10;UBERON:0006562!9.73e-14!11;UBERON:0001723!1.60e-13!3;UBERON:0001033!1.60e-13!3;UBERON:0010056!1.60e-13!3;UBERON:0000165!6.82e-12!28;UBERON:0000930!6.82e-12!28;UBERON:0007029!2.79e-11!1;UBERON:0000989!3.76e-11!1;UBERON:0008811!3.76e-11!1;UBERON:0006258!3.76e-11!1;UBERON:0005876!3.76e-11!1;UBERON:0004874!3.76e-11!1;UBERON:0000014!1.21e-10!4;UBERON:0002372!1.61e-10!1;UBERON:0001961!1.61e-10!1;UBERON:0001744!1.61e-10!1;UBERON:0001735!1.61e-10!1;UBERON:0000161!1.99e-09!35;UBERON:0001557!4.87e-08!19;UBERON:0003102!6.09e-07!95;UBERON:0001444!9.49e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;9.99e-30;1!UBERON:0000989;2.37e-29;1!UBERON:0008811;2.37e-29;1!UBERON:0001044;5.35e-20;6!UBERON:0003293;5.35e-20;6!UBERON:0003294;5.35e-20;6!UBERON:0010047;5.35e-20;6!UBERON:0003408;5.35e-20;6!UBERON:0000167;5.35e-20;6!UBERON:0002419;2.55e-15;2!UBERON:0007771;2.55e-15;2!UBERON:0003297;2.55e-15;2!UBERON:0001821;2.55e-15;2!UBERON:0003487;2.55e-15;2!UBERON:0001820;2.55e-15;2!UBERON:0002365;3.14e-09;31!UBERON:0002330;3.14e-09;31!UBERON:0001041;3.72e-09;14!UBERON:0001003;1.56e-08;15!UBERON:0007376;1.56e-08;15!UBERON:0000014;1.82e-08;4!UBERON:0000161;5.50e-07;19!UBERON:0000166;5.50e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.99e-30,1;UBERON:0000989,2.37e-29,1;UBERON:0008811,2.37e-29,1;UBERON:0006258,2.37e-29,1;UBERON:0005876,2.37e-29,1;UBERON:0004874,2.37e-29,1;UBERON:0001044,5.35e-20,6;UBERON:0003293,5.35e-20,6;UBERON:0003294,5.35e-20,6;UBERON:0010047,5.35e-20,6;UBERON:0000167,5.35e-20,6;UBERON:0002419,2.74e-15,2;UBERON:0007771,2.74e-15,2;UBERON:0003297,2.74e-15,2;UBERON:0001821,2.74e-15,2;UBERON:0003487,2.74e-15,2;UBERON:0001820,2.74e-15,2;UBERON:0005089,2.74e-15,2;UBERON:0005088,2.74e-15,2;UBERON:0003408,2.00e-12,10;UBERON:0002365,6.01e-09,31;UBERON:0002330,6.01e-09,31;UBERON:0001003,1.59e-08,15;UBERON:0007376,1.59e-08,15;UBERON:0007383,1.59e-08,15;UBERON:0000014,1.82e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53366118706464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86900977278975,0,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,4.26796192734875,8.98637560358319,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53366118706464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86900977278975,0,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,4.26796192734875,8.98637560358319,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@KRT10 | |short_description=p12@KRT10 | ||
}} | }} |
Latest revision as of 03:54, 20 September 2015
Short description: | p12@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | 18bp_to_M19156_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | P13645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.73e-51 | 5 |
protein secreting cell | 6.48e-43 | 6 |
acinar cell of salivary gland | 8.37e-39 | 3 |
glandular epithelial cell | 6.20e-29 | 9 |
CD1a-positive Langerhans cell | 1.78e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.78e-15 | 2 |
sebum secreting cell | 2.74e-15 | 2 |
epithelial cell of sweat gland | 2.74e-15 | 2 |
epithelial cell of skin gland | 2.74e-15 | 2 |
acinar cell of sebaceous gland | 2.74e-15 | 2 |
secretory cell | 8.54e-08 | 36 |
Langerhans cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 9.99e-30 | 1 |
penis | 2.37e-29 | 1 |
intromittent organ | 2.37e-29 | 1 |
lateral plate mesenchyme | 2.37e-29 | 1 |
undifferentiated genital tubercle | 2.37e-29 | 1 |
somatopleure | 2.37e-29 | 1 |
saliva-secreting gland | 5.35e-20 | 6 |
gland of oral region | 5.35e-20 | 6 |
gland of foregut | 5.35e-20 | 6 |
oral gland | 5.35e-20 | 6 |
oral cavity | 5.35e-20 | 6 |
skin gland | 2.74e-15 | 2 |
epidermis gland | 2.74e-15 | 2 |
gland of integumental system | 2.74e-15 | 2 |
sebaceous gland | 2.74e-15 | 2 |
skin sebaceous gland | 2.74e-15 | 2 |
sweat gland | 2.74e-15 | 2 |
sweat gland placode | 2.74e-15 | 2 |
sebaceous gland placode | 2.74e-15 | 2 |
gland of gut | 2.00e-12 | 10 |
exocrine gland | 6.01e-09 | 31 |
exocrine system | 6.01e-09 | 31 |
skin epidermis | 1.59e-08 | 15 |
outer epithelium | 1.59e-08 | 15 |
enveloping layer of ectoderm | 1.59e-08 | 15 |
zone of skin | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.39e-07 | 5 |