FFCP PHASE1:Hg19::chr12:121712313..121712330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10645 | |EntrezGene=10645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1470 | |HGNC=1470 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000392474_5end | |association_with_transcript=3bp_to_ENST00000392474_5end | ||
|cluster_id=chr12:121712313..121712330,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_CAMKK2_5end | |description=CAGE_peak_6_at_CAMKK2_5end | ||
|id=chr12:121712313..121712330,- | |id=chr12:121712313..121712330,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;8.34e-34;1!CL:0000557;8.34e-34;1!CL:0000775;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3!UBERON:0005425;8.34e-34;1!UBERON:0003056;3.06e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004732!1.99e-13!13;UBERON:0004733!9.13e-11!12;UBERON:0002028!9.13e-11!12;UBERON:0007277!9.13e-11!12;UBERON:0003076!1.82e-08!15;UBERON:0003057!1.82e-08!15;UBERON:0002680!6.30e-07!9;UBERON:0001895!6.30e-07!9;UBERON:0010092!6.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0004732;5.29e-41;13!UBERON:0000941;8.34e-34;1!UBERON:0001785;8.34e-34;1!UBERON:0002464;8.34e-34;1!UBERON:0004904;8.34e-34;1!UBERON:0001021;8.34e-34;1!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0004733;1.41e-25;12!UBERON:0002028;1.41e-25;12!UBERON:0003714;1.17e-17;2!UBERON:0005162;1.17e-17;2!UBERON:0000122;1.17e-17;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0004732,5.03e-41,13;UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0004733,1.41e-25,12;UBERON:0002028,1.41e-25,12;UBERON:0007277,1.41e-25,12;UBERON:0003076,1.20e-20,15;UBERON:0003057,1.20e-20,15;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0001781,1.57e-09,4;UBERON:0003075,6.23e-07,82;UBERON:0007284,6.23e-07,82;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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| ||
|short_description=p6@CAMKK2 | |short_description=p6@CAMKK2 | ||
}} | }} |
Latest revision as of 21:44, 16 September 2015
Short description: | p6@CAMKK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CAMKK2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 3bp_to_ENST00000392474_5end |
EntrezGene: | CAMKK2 |
HGNC: | 1470 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
segmental subdivision of nervous system | 5.03e-41 | 13 |
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
segmental subdivision of hindbrain | 1.41e-25 | 12 |
hindbrain | 1.41e-25 | 12 |
presumptive hindbrain | 1.41e-25 | 12 |
posterior neural tube | 1.20e-20 | 15 |
chordal neural plate | 1.20e-20 | 15 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
layer of retina | 1.57e-09 | 4 |
neural plate | 6.23e-07 | 82 |
presumptive neural plate | 6.23e-07 | 82 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |