FFCP PHASE1:Hg19::chr17:38599693..38599708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3487 | |EntrezGene=3487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5473 | |HGNC=5473 | ||
|TSSclassifier=strong | |||
|UniProt=B4E351 | |UniProt=B4E351 | ||
|association_with_transcript=0bp_to_ENST00000542955_5end | |association_with_transcript=0bp_to_ENST00000542955_5end | ||
|cluster_id=chr17:38599693..38599708,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_1_at_IGFBP4_5end | |description=CAGE_peak_1_at_IGFBP4_5end | ||
|id=chr17:38599693..38599708,+ | |id=chr17:38599693..38599708,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.31e-26!180;CL:0000222!1.44e-20!119;CL:0000183!3.04e-16!59;CL:0000057!8.51e-16!75;CL:0000680!2.16e-15!57;CL:0000056!2.16e-15!57;CL:0000355!2.16e-15!57;CL:0000187!3.64e-14!54;CL:0000393!2.69e-12!60;CL:0000211!2.69e-12!60;CL:0000192!2.41e-11!42;CL:0000514!2.41e-11!42;CL:0000220!1.38e-10!246;CL:0002321!1.61e-10!248;CL:0000359!1.53e-08!32;CL:0000213!5.06e-07!57;CL:0000215!5.06e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.31e-26!180;CL:0000222!1.44e-20!119;CL:0000183!3.04e-16!59;CL:0000057!8.51e-16!75;CL:0000680!2.16e-15!57;CL:0000056!2.16e-15!57;CL:0000355!2.16e-15!57;CL:0000187!3.64e-14!54;CL:0000393!2.69e-12!60;CL:0000211!2.69e-12!60;CL:0000192!2.41e-11!42;CL:0000514!2.41e-11!42;CL:0000220!1.38e-10!246;CL:0002321!1.61e-10!248;CL:0000359!1.53e-08!32;CL:0000213!5.06e-07!57;CL:0000215!5.06e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000192;7.85e-09;43!CL:0000187;1.76e-08;55!CL:0000359;3.30e-08;32!CL:0000393;2.45e-07;61!CL:0000211;2.45e-07;61!CL:0000057;7.03e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.42e-21,121;CL:0000057,2.42e-16,76;CL:0000680,7.35e-16,58;CL:0000056,7.35e-16,58;CL:0000355,7.35e-16,58;CL:0000187,1.26e-14,55;CL:0000393,9.98e-13,61;CL:0000211,9.98e-13,61;CL:0000192,8.54e-12,43;CL:0000514,8.54e-12,43;CL:0002321,4.81e-11,250;CL:0000359,1.51e-08,32;CL:0000213,3.63e-07,58;CL:0000215,3.63e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;7.85e-09;43!CL:0000355;1.02e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.71e-24!216;UBERON:0005256!2.07e-24!143;UBERON:0003914!1.18e-19!118;UBERON:0000490!2.15e-19!138;UBERON:0000475!1.81e-17!365;UBERON:0000914!2.48e-17!83;UBERON:0002329!2.48e-17!83;UBERON:0003077!2.48e-17!83;UBERON:0003059!2.48e-17!83;UBERON:0007282!2.48e-17!83;UBERON:0009618!2.48e-17!83;UBERON:0007285!2.48e-17!83;UBERON:0003104!6.06e-17!238;UBERON:0009142!6.06e-17!238;UBERON:0004872!1.20e-16!84;UBERON:0000481!4.34e-16!347;UBERON:0002049!6.00e-16!79;UBERON:0007798!6.00e-16!79;UBERON:0002385!2.00e-15!63;UBERON:0001015!2.00e-15!63;UBERON:0000383!2.00e-15!63;UBERON:0001134!2.25e-15!61;UBERON:0002036!2.25e-15!61;UBERON:0003082!2.25e-15!61;UBERON:0004290!2.75e-15!70;UBERON:0000486!6.86e-15!82;UBERON:0000119!1.76e-13!312;UBERON:0000477!4.77e-13!286;UBERON:0000483!1.10e-12!309;UBERON:0000055!1.39e-12!69;UBERON:0001981!1.97e-12!60;UBERON:0007500!1.97e-12!60;UBERON:0004537!1.97e-12!60;UBERON:0006965!1.97e-12!60;UBERON:0001009!3.39e-11!113;UBERON:0004535!6.54e-11!110;UBERON:0004111!5.07e-10!241;UBERON:0000468!5.74e-10!659;UBERON:0009569!1.39e-09!113;UBERON:0001637!3.61e-09!42;UBERON:0003509!3.61e-09!42;UBERON:0004572!3.61e-09!42;UBERON:0004573!3.13e-08!33;UBERON:0004571!3.13e-08!33;UBERON:0000466!2.79e-07!126;UBERON:0000025!3.11e-07!194;UBERON:0003103!5.81e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-07;33!UBERON:0004571;1.42e-07;33!UBERON:0001637;8.12e-07;42!UBERON:0003509;8.12e-07;42!UBERON:0004572;8.12e-07;42!UBERON:0002385;8.23e-07;31!UBERON:0001015;8.23e-07;31!UBERON:0000383;8.23e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.69e-24,160;UBERON:0009142,7.69e-24,160;UBERON:0005256,3.70e-22,122;UBERON:0002100,5.79e-22,199;UBERON:0000490,2.87e-20,148;UBERON:0003914,3.03e-19,117;UBERON:0007503,4.32e-18,78;UBERON:0004872,3.88e-16,83;UBERON:0002385,6.92e-16,64;UBERON:0001015,6.92e-16,64;UBERON:0000383,6.92e-16,64;UBERON:0001134,7.75e-16,62;UBERON:0002036,7.75e-16,62;UBERON:0003082,7.75e-16,62;UBERON:0007524,8.78e-16,73;UBERON:0002329,9.74e-16,71;UBERON:0003059,9.74e-16,71;UBERON:0007282,9.74e-16,71;UBERON:0004290,9.74e-16,71;UBERON:0009618,9.74e-16,71;UBERON:0002049,1.94e-15,78;UBERON:0007798,1.94e-15,78;UBERON:0000486,2.54e-15,83;UBERON:0003077,2.93e-15,72;UBERON:0007285,2.93e-15,72;UBERON:0000119,1.20e-13,309;UBERON:0000483,7.63e-13,306;UBERON:0000055,4.23e-12,68;UBERON:0007500,6.25e-12,59;UBERON:0001981,6.25e-12,59;UBERON:0004537,6.25e-12,59;UBERON:0006965,6.25e-12,59;UBERON:0001009,7.85e-11,112;UBERON:0004535,1.51e-10,109;UBERON:0004111,8.50e-10,240;UBERON:0009569,3.04e-09,112;UBERON:0001637,3.55e-09,42;UBERON:0003509,3.55e-09,42;UBERON:0004572,3.55e-09,42;UBERON:0004573,3.08e-08,33;UBERON:0004571,3.08e-08,33;UBERON:0000025,9.44e-07,192 | |||
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| ||
|short_description=p1@IGFBP4 | |short_description=p1@IGFBP4 | ||
}} | }} |
Latest revision as of 01:34, 20 September 2015
Short description: | p1@IGFBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFBP4_5end |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | 0bp_to_ENST00000542955_5end |
EntrezGene: | IGFBP4 |
HGNC: | 5473 |
UniProt: | B4E351 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.42e-21 | 121 |
fibroblast | 2.42e-16 | 76 |
muscle precursor cell | 7.35e-16 | 58 |
myoblast | 7.35e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.35e-16 | 58 |
muscle cell | 1.26e-14 | 55 |
electrically responsive cell | 9.98e-13 | 61 |
electrically active cell | 9.98e-13 | 61 |
smooth muscle cell | 8.54e-12 | 43 |
smooth muscle myoblast | 8.54e-12 | 43 |
embryonic cell | 4.81e-11 | 250 |
vascular associated smooth muscle cell | 1.51e-08 | 32 |
lining cell | 3.63e-07 | 58 |
barrier cell | 3.63e-07 | 58 |