FFCP PHASE1:Hg19::chr17:38029166..38029196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38029166..38029196,+ | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_at_chr17:38029166..38029196,+ | |description=CAGE_peak_at_chr17:38029166..38029196,+ | ||
|id=chr17:38029166..38029196,+ | |id=chr17:38029166..38029196,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.53e-24!24;CL:0000826!1.53e-24!24;CL:0000542!1.39e-17!53;CL:0000051!1.39e-17!53;CL:0000838!3.14e-15!52;CL:0000236!2.43e-11!14;CL:0000080!1.74e-10!6;CL:1001319!2.80e-07!1;CL:1000600!2.80e-07!1 | |ontology_enrichment_celltype=CL:0000945!1.53e-24!24;CL:0000826!1.53e-24!24;CL:0000542!1.39e-17!53;CL:0000051!1.39e-17!53;CL:0000838!3.14e-15!52;CL:0000236!2.43e-11!14;CL:0000080!1.74e-10!6;CL:1001319!2.80e-07!1;CL:1000600!2.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.44e-17;24!CL:0000542;1.46e-09;53!CL:0000236;1.36e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.92e-17,24;CL:0000826,5.92e-17,24;CL:0000838,3.48e-12,52;CL:0000542,5.85e-12,53;CL:0000051,5.85e-12,53;CL:0000236,4.82e-08,14;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.46e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.49e-10!10;DOID:0060060!4.89e-08!1;DOID:0060061!4.89e-08!1;DOID:8691!4.89e-08!1;DOID:2355!6.37e-08!1;DOID:12603!1.48e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.92e-26;1!DOID:0060061;5.92e-26;1!DOID:8691;5.92e-26;1!DOID:2355;5.92e-26;1!DOID:0060058;5.13e-23;10!DOID:74;1.07e-13;2!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.58e-26,1;DOID:0060061,3.58e-26,1;DOID:8691,3.58e-26,1;DOID:2355,9.79e-26,1;DOID:0060058,5.13e-23,10;DOID:74,1.37e-13,2;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001255!5.38e-13!2;UBERON:0001556!5.38e-13!2;UBERON:0000178!1.10e-10!15;UBERON:0000179!1.10e-10!15;UBERON:0000463!1.10e-10!15;UBERON:0004645!2.80e-07!1;UBERON:0001256!2.80e-07!1;UBERON:0001259!2.80e-07!1;UBERON:0003343!3.08e-07!4;UBERON:0004785!3.08e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.94e-11;10!UBERON:0000178;1.44e-07;15!UBERON:0000179;1.44e-07;15!UBERON:0000463;1.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.98e-11,10;UBERON:0000358,5.98e-11,10;UBERON:0000307,5.98e-11,10;UBERON:0000091,5.98e-11,10;UBERON:0000087,5.98e-11,10;UBERON:0007010,5.98e-11,10;UBERON:0007806,5.98e-11,10;UBERON:0008780,5.98e-11,10;UBERON:0005728,5.98e-11,10;UBERON:0000178,1.31e-07,15;UBERON:0000179,1.31e-07,15;UBERON:0000463,1.31e-07,15 | |||
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|short_description=p@chr17:38029166..38029196,+ | |short_description=p@chr17:38029166..38029196,+ | ||
}} | }} |
Latest revision as of 16:15, 25 July 2015
Short description: | p@chr17:38029166..38029196, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38029166..38029196, + |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.92e-17 | 24 |
pro-B cell | 5.92e-17 | 24 |
lymphoid lineage restricted progenitor cell | 3.48e-12 | 52 |
lymphocyte | 5.85e-12 | 53 |
common lymphoid progenitor | 5.85e-12 | 53 |
B cell | 4.82e-08 | 14 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.98e-11 | 10 |
blastocyst | 5.98e-11 | 10 |
blastula | 5.98e-11 | 10 |
bilaminar disc | 5.98e-11 | 10 |
inner cell mass | 5.98e-11 | 10 |
cleaving embryo | 5.98e-11 | 10 |
connecting stalk | 5.98e-11 | 10 |
inner cell mass derived epiblast | 5.98e-11 | 10 |
extraembryonic mesoderm | 5.98e-11 | 10 |
blood | 1.31e-07 | 15 |
haemolymphatic fluid | 1.31e-07 | 15 |
organism substance | 1.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.58e-26 | 1 |
cutaneous T cell lymphoma | 3.58e-26 | 1 |
mycosis fungoides | 3.58e-26 | 1 |
anemia | 9.79e-26 | 1 |
lymphoma | 5.13e-23 | 10 |
hematopoietic system disease | 1.37e-13 | 2 |
cardiovascular system disease | 1.92e-07 | 4 |