FFCP PHASE1:Hg19::chr12:114843607..114843621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=267bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |association_with_transcript=267bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | ||
|cluster_id=chr12:114843607..114843621,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_7_at_TBX5_5end | |description=CAGE_peak_7_at_TBX5_5end | ||
|id=chr12:114843607..114843621,- | |id=chr12:114843607..114843621,- | ||
|ontology_enrichment_celltype=CL:0002620!6.40e-19!23;CL:0000057!9.81e-16!75;CL:0002334!5.61e-12!12;CL:0002494!2.06e-10!16;CL:0002521!4.89e-07!3;CL:0002582!6.75e-07!3;CL:0002580!9.84e-07!3 | |ontology_enrichment_celltype=CL:0002620!6.40e-19!23;CL:0000057!9.81e-16!75;CL:0002334!5.61e-12!12;CL:0002494!2.06e-10!16;CL:0002521!4.89e-07!3;CL:0002582!6.75e-07!3;CL:0002580!9.84e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.58e-11;1!UBERON:0004140;4.15e-11;1!UBERON:0010227;5.56e-11;1!UBERON:0005062;9.51e-11;4!UBERON:0007284;9.51e-11;4!UBERON:0009143;1.15e-10;1!UBERON:0004874;1.15e-10;1 | |||
|ontology_enrichment_disease=DOID:17!4.71e-09!5;DOID:450!4.71e-09!5;DOID:66!4.71e-09!5;DOID:423!4.71e-09!5;DOID:0080000!4.71e-09!5;DOID:11722!4.71e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:114;1.14e-20;2!DOID:178;3.58e-11;1!DOID:326;3.58e-11;1!DOID:3978;3.58e-11;1!DOID:3394;3.58e-11;1!DOID:5844;3.58e-11;1!DOID:1287;8.23e-11;4!DOID:6193;1.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.26e-20,2;DOID:178,3.76e-11,1;DOID:326,3.76e-11,1;DOID:3978,3.76e-11,1;DOID:3394,3.76e-11,1;DOID:5844,3.76e-11,1;DOID:1287,8.64e-11,4;DOID:6193,9.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.72e-21!27;UBERON:0002199!1.35e-17!45;UBERON:0002416!1.35e-17!45;UBERON:0000948!4.92e-16!24;UBERON:0005498!4.92e-16!24;UBERON:0004140!4.92e-16!24;UBERON:0009881!4.92e-16!24;UBERON:0004141!4.92e-16!24;UBERON:0003084!4.92e-16!24;UBERON:0007005!4.92e-16!24;UBERON:0004139!4.92e-16!24;UBERON:0004291!4.92e-16!24;UBERON:0002097!6.33e-12!40;UBERON:0002072!8.61e-10!5;UBERON:0003102!4.22e-08!95;UBERON:0003103!9.26e-08!69;UBERON:0000310!3.89e-07!10;UBERON:0002190!4.89e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!3.72e-21!27;UBERON:0002199!1.35e-17!45;UBERON:0002416!1.35e-17!45;UBERON:0000948!4.92e-16!24;UBERON:0005498!4.92e-16!24;UBERON:0004140!4.92e-16!24;UBERON:0009881!4.92e-16!24;UBERON:0004141!4.92e-16!24;UBERON:0003084!4.92e-16!24;UBERON:0007005!4.92e-16!24;UBERON:0004139!4.92e-16!24;UBERON:0004291!4.92e-16!24;UBERON:0002097!6.33e-12!40;UBERON:0002072!8.61e-10!5;UBERON:0003102!4.22e-08!95;UBERON:0003103!9.26e-08!69;UBERON:0000310!3.89e-07!10;UBERON:0002190!4.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.09e-37;25!UBERON:0000948;8.89e-21;22!UBERON:0003978;5.03e-14;3!UBERON:0000946;5.03e-14;3!UBERON:0004151;6.31e-14;3!UBERON:0002146;2.53e-11;1!UBERON:0005623;2.53e-11;1!UBERON:0002084;3.58e-11;1!UBERON:0002082;3.58e-11;1!UBERON:0002079;5.56e-11;1!UBERON:0002135;5.56e-11;1!UBERON:0000989;1.15e-10;1!UBERON:0008811;1.15e-10;1!UBERON:0003103;1.75e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.27e-34,27;UBERON:0000948,5.43e-19,24;UBERON:0005498,5.43e-19,24;UBERON:0004140,5.43e-19,24;UBERON:0009881,5.43e-19,24;UBERON:0004141,5.43e-19,24;UBERON:0003084,5.43e-19,24;UBERON:0007005,5.43e-19,24;UBERON:0004139,5.43e-19,24;UBERON:0004291,5.43e-19,24;UBERON:0003978,4.42e-14,3;UBERON:0009751,4.42e-14,3;UBERON:0000946,4.42e-14,3;UBERON:0002523,4.42e-14,3;UBERON:0005983,4.42e-14,3;UBERON:0002165,4.42e-14,3;UBERON:0002062,4.42e-14,3;UBERON:0007280,4.42e-14,3;UBERON:0004151,6.96e-14,3;UBERON:0003103,8.75e-13,68;UBERON:0002146,2.53e-11,1;UBERON:0005623,2.53e-11,1;UBERON:0002084,3.41e-11,1;UBERON:0002082,3.41e-11,1;UBERON:0010226,3.41e-11,1;UBERON:0002135,4.58e-11,1;UBERON:0002079,6.77e-11,1;UBERON:0000989,8.22e-11,1;UBERON:0008811,8.22e-11,1;UBERON:0006258,8.22e-11,1;UBERON:0005876,8.22e-11,1;UBERON:0004874,8.22e-11,1;UBERON:0001009,3.56e-07,112;UBERON:0007023,5.62e-07,114 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0,0,0,0,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.368199594569197,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0.280660094433074,0,1.02341449813341,0,0,0.154209693802656,0.177561725313127,0.246381468041427,1.03850885836724,0.581051892299796,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0.421258456238981,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,1.06687918137261,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,8.70809611244398,0,4.3929380109778,7.72606886645828,7.81100101046554,3.89664140423012,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0.302461847526478,0.777186002913902,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.926404341482917,0.657852148736121,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,2.46219742103469,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.863424021355654,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.795803100645473,0,0,0,0.452888530700021,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,1.9307228228694,0,0,0.122241444182866,0,0.665756774185513,0,0 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|phase1_expression=1.09007027562334,0.856402095563933,0,0,0,0,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.368199594569197,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0.280660094433074,0,1.02341449813341,0,0,0.154209693802656,0.177561725313127,0.246381468041427,1.03850885836724,0.581051892299796,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0.421258456238981,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,1.06687918137261,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,8.70809611244398,0,4.3929380109778,7.72606886645828,7.81100101046554,3.89664140423012,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0.302461847526478,0.777186002913902,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.926404341482917,0.657852148736121,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,2.46219742103469,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.863424021355654,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.795803100645473,0,0,0,0.452888530700021,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,1.9307228228694,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p7@TBX5 | |short_description=p7@TBX5 | ||
}} | }} |
Latest revision as of 14:10, 16 September 2015
Short description: | p7@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TBX5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 267bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.27e-34 | 27 |
heart | 5.43e-19 | 24 |
primitive heart tube | 5.43e-19 | 24 |
primary heart field | 5.43e-19 | 24 |
anterior lateral plate mesoderm | 5.43e-19 | 24 |
heart tube | 5.43e-19 | 24 |
heart primordium | 5.43e-19 | 24 |
cardiac mesoderm | 5.43e-19 | 24 |
cardiogenic plate | 5.43e-19 | 24 |
heart rudiment | 5.43e-19 | 24 |
valve | 4.42e-14 | 3 |
cardiac mesenchyme | 4.42e-14 | 3 |
cardial valve | 4.42e-14 | 3 |
tunica intima | 4.42e-14 | 3 |
heart layer | 4.42e-14 | 3 |
endocardium | 4.42e-14 | 3 |
endocardial cushion | 4.42e-14 | 3 |
presumptive endocardium | 4.42e-14 | 3 |
cardiac chamber | 6.96e-14 | 3 |
compound organ | 8.75e-13 | 68 |
pulmonary valve | 2.53e-11 | 1 |
semi-lunar valve | 2.53e-11 | 1 |
heart left ventricle | 3.41e-11 | 1 |
cardiac ventricle | 3.41e-11 | 1 |
future cardiac ventricle | 3.41e-11 | 1 |
mitral valve | 4.58e-11 | 1 |
left cardiac atrium | 6.77e-11 | 1 |
penis | 8.22e-11 | 1 |
intromittent organ | 8.22e-11 | 1 |
lateral plate mesenchyme | 8.22e-11 | 1 |
undifferentiated genital tubercle | 8.22e-11 | 1 |
somatopleure | 8.22e-11 | 1 |
circulatory system | 3.56e-07 | 112 |
adult organism | 5.62e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.26e-20 | 2 |
vascular disease | 3.76e-11 | 1 |
ischemia | 3.76e-11 | 1 |
extrinsic cardiomyopathy | 3.76e-11 | 1 |
myocardial ischemia | 3.76e-11 | 1 |
myocardial infarction | 3.76e-11 | 1 |
cardiovascular system disease | 8.64e-11 | 4 |
epithelioid sarcoma | 9.97e-11 | 1 |