FFCP PHASE1:Hg19::chr12:113627532..113627537,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113627532..113627537,- | |||
|description=CAGE_peak_at_chr12:113627532..113627537,- | |description=CAGE_peak_at_chr12:113627532..113627537,- | ||
|id=chr12:113627532..113627537,- | |id=chr12:113627532..113627537,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.30e-19;1!CL:0000047;1.72e-10;2!CL:0000159;1.72e-10;2!CL:0000322;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.56e-19,1;CL:0000159,1.89e-10,2;CL:0000047,4.42e-10,8;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.25e-19;1!UBERON:0003056;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!9.94e-10!239;DOID:162!1.06e-09!235;DOID:305!1.87e-09!106;DOID:0050686!2.25e-08!137;DOID:0050687!2.59e-08!143;DOID:299!6.15e-07!25 | |ontology_enrichment_disease=DOID:14566!9.94e-10!239;DOID:162!1.06e-09!235;DOID:305!1.87e-09!106;DOID:0050686!2.25e-08!137;DOID:0050687!2.59e-08!143;DOID:299!6.15e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.68e-37;2!DOID:2152;1.30e-19;1!DOID:3910;2.72e-10;2!DOID:299;3.72e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.69e-37,2;DOID:2152,1.56e-19,1;DOID:3910,3.58e-10,2;DOID:299,3.80e-07,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.30e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0004909;1.72e-10;2!UBERON:0004903;2.72e-10;2!UBERON:0003714;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.56e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
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| ||
|short_description=p@chr12:113627532..113627537,- | |short_description=p@chr12:113627532..113627537,- | ||
}} | }} |
Latest revision as of 05:11, 24 July 2015
Short description: | p@chr12:113627532..113627537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113627532..113627537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.56e-19 | 1 |
seromucus secreting cell | 1.89e-10 | 2 |
neuronal stem cell | 4.42e-10 | 8 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.56e-19 | 1 |
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
epithelium of gonad | 1.89e-10 | 2 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.69e-37 | 2 |
ovary epithelial cancer | 1.56e-19 | 1 |
lung adenocarcinoma | 3.58e-10 | 2 |
adenocarcinoma | 3.80e-07 | 25 |