FFCP PHASE1:Hg19::chr10:70856940..70856962,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:70856940..70856962,+
|short_description=p3@SRGN
|description=CAGE_peak_3_at_SRGN_5end
|association_with_transcript=79bp_to_X12765_5end
|EntrezGene=5552
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5552 | |EntrezGene=5552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9361 | |HGNC=9361 | ||
|TSSclassifier=strong | |||
|UniProt=P10124 | |UniProt=P10124 | ||
|association_with_transcript=79bp_to_X12765_5end | |||
|cluster_id=chr10:70856940..70856962,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_SRGN_5end | |||
|id=chr10:70856940..70856962,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.48e-43!112;CL:0000049!8.48e-43!112;CL:0000766!4.81e-41!76;CL:0000557!4.89e-36!71;CL:0000037!6.97e-36!172;CL:0000566!6.97e-36!172;CL:0000839!2.28e-35!70;CL:0002032!8.05e-35!165;CL:0000837!8.05e-35!165;CL:0000988!7.20e-33!182;CL:0000738!3.00e-32!140;CL:0002009!4.33e-32!65;CL:0002194!1.03e-31!63;CL:0000576!1.03e-31!63;CL:0000040!1.03e-31!63;CL:0000559!1.03e-31!63;CL:0002057!1.08e-29!42;CL:0000860!4.68e-26!45;CL:0002031!2.01e-25!124;CL:0002087!1.72e-23!119;CL:0000048!1.10e-22!430;CL:0000723!3.39e-21!436;CL:0000034!2.12e-20!444;CL:0000134!1.90e-19!358;CL:0002320!2.25e-19!365;CL:0000219!9.16e-14!390;CL:0000094!4.83e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-42;33!CL:0002057;2.40e-42;33!CL:0000473;6.35e-36;39!CL:0000234;6.35e-36;39!CL:0000576;1.44e-30;48!CL:0000766;4.30e-29;69!CL:0000763;1.33e-17;100!CL:0000738;1.17e-12;136!CL:0000094;6.88e-12;8!CL:0002087;2.00e-10;104!CL:0000988;6.02e-09;177!CL:0002393;4.03e-08;6!CL:0002397;4.03e-08;6!CL:0000081;4.21e-08;11!CL:0000097;8.36e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.49e-69,72;CL:0000763,1.25e-57,108;CL:0000049,1.25e-57,108;CL:0000557,4.77e-57,67;CL:0000839,3.78e-56,66;CL:0000473,4.29e-52,48;CL:0000234,4.29e-52,48;CL:0002194,5.71e-52,59;CL:0000576,5.71e-52,59;CL:0000040,5.71e-52,59;CL:0000559,5.71e-52,59;CL:0000860,3.79e-51,42;CL:0002057,3.79e-51,42;CL:0002009,1.07e-49,61;CL:0000738,2.27e-49,136;CL:0000037,3.99e-48,168;CL:0002032,5.65e-46,161;CL:0000837,5.65e-46,161;CL:0000988,3.15e-44,177;CL:0002031,1.05e-37,120;CL:0002087,9.65e-37,115;CL:0000134,1.72e-19,354;CL:0000048,1.44e-18,427;CL:0002320,1.57e-18,361;CL:0000723,7.44e-18,433;CL:0000034,1.47e-17,441;CL:0000219,3.46e-15,386;CL:0000094,5.28e-12,8;CL:0000081,3.51e-08,11;CL:0000097,7.51e-08,5;CL:0002028,7.51e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.94e-37;42!CL:0000049;9.80e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-40!102;UBERON:0003061!1.06e-40!102;UBERON:0002193!1.66e-39!112;UBERON:0002371!3.96e-36!80;UBERON:0001474!4.75e-32!86;UBERON:0003081!2.51e-29!216;UBERON:0004765!1.82e-27!101;UBERON:0001434!1.82e-27!101;UBERON:0002405!3.12e-27!115;UBERON:0002204!3.85e-24!167;UBERON:0002384!3.04e-19!375;UBERON:0000926!2.25e-08!448;UBERON:0004120!2.25e-08!448;UBERON:0006603!2.25e-08!448;UBERON:0001009!3.41e-08!113;UBERON:0004535!4.31e-08!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.56e-57,98;UBERON:0003061,4.56e-57,98;UBERON:0002371,7.97e-54,76;UBERON:0002193,1.34e-49,108;UBERON:0001474,2.09e-48,82;UBERON:0002405,1.65e-43,93;UBERON:0004765,2.58e-42,90;UBERON:0001434,1.93e-37,100;UBERON:0003081,2.42e-34,203;UBERON:0002204,5.30e-26,167;UBERON:0000926,2.40e-19,315;UBERON:0004120,2.40e-19,315;UBERON:0006603,2.40e-19,315;UBERON:0002384,3.22e-19,371 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.893922188854576,6.10636966870258,2.53299878168311,0,0,0,0,0,0,0.247532705920093,0.662794751455832,2.01697543935533,1.80808358407193,2.19093027116212,0,0,0,0,0,0,0.125542639594803,1.91033514369878,2.62721886239826,1.81034797021462,3.14691421479123,1.53531759238885,1.54816123316076,0,0,0,0,0.142169232487422,0.293600439334847,2.76997704265939,4.21143339687298,3.68918480216948,0,0.647787332037959,0.257575567634187,9.8870802370104,3.77875943688809,5.57943340731977,13.7133131774354,6.16751832032739,2.78735733805593,10.9323109082417,8.19714260893122,11.5876292645407,23.7874519708267,8.39130088658974,12.1883837934908,16.5653258797492,5.45812300115692,12.5845151289247,37.9544026539919,10.9115869205872,24.2948107803636,10.8850929061616,4.3882004676759,5.11469700639233,20.895065181258,13.6172453925874,6.22822248995575,14.0699252543776,5.73631210262222,5.2125322729228,21.1889825921679,6.99727508376373,18.9877432464531,2.95757400836718,2.12604299965044,1.46761051855863,2.13424399178341,1.95229960693958,2.89306056054744,1.14005097496499,0.79566670879636,0.730656615058536,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0.560508562981536,1.84368859342554,0.393419540227666,1.17903228824749,1.23360899399706,0.668745981562712,0.32592226663359,0,0,1.89397776704795,0.589211814949674,0.886135578334485,0.812411591295047,0.384273959177026,1.8208308658383,0.657751618414705,0,0.289803085735052,0,0,0,0.453237370790265,0,0.34362744548263,0.759059076058509,0,0.651083453856419,0,0.451725357233318,0,0,0,0,0.604820229674197,1.06976078313403,1.01377082717959,2.43806866313962,2.01210257911091,0.12786256184353,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0,0,0,2.59637914923747,3.30846500868608,3.58986493400936,0.238490624305342,0,1.11437250398869,0.198762407366705,0,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.626984899610432,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0.732186172644509,1.10298924103761,0,0.892997282840798,0,0.337834441449967,1.53316637465883,0.949265659568129,0.732806975721629,18.4492584410489,27.1446184903828,0,6.46063537203914,0.886413581652058,0.529636723252875,3.15520282823695,0.709336764396714,0.560677600142307,1.06748995729705,0,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,1.22595118319608,0.600952235626387,1.24775401476023,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0.738651018262192,0.702012795417713,1.18904929830983,0,0,0,0,0,0,3.4486426652716,2.99364675644969,5.1832028885193,8.35895729818376,3.1560608356595,0,0,0,0,0.205654985406647,0.600686115687835,0,0.112131084345361,0.43596006883328,0.36669142910475,0,0,0,0,0,0.514414748524284,2.83698264046557,0.532844358032199,0.857867961948885,0,0,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0.479249710983165,0,0,2.02693829334611,0.410952645100767,0,0.224170287987055,0.394061520403854,1.07813787429759,1.66845947163673,0,0,0,0,0,55.4265197720915,107.698125313449,25.2793463195982,0.24538298343828,0,0.542530047399471,0.207970861530807,1.96271887676878,0,0.117141414992713,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0,0,0,1.44737618286021,2.5885704098234,2.13455115606889,0,0,0,0.248107807818777,0,0,1.02511319404561,1.53512174720011,1.76939313257968,0,0.308419387605311,0,0,0.519254429183621,0.232420756919918,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,1.53084334748864,1.0795795805107,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0.325378394664303,0.515205058238611,0,0,0,0,3.21367859688319,0,0.616194468458578,0.460511024178389,0.827019434907183,0.537101224341368,0.435050081742686,0.255679882248303,0,0,0,0,0,0.464845549297286,1.5740617341532,0,0.616067160352178,0,0.869932992075073,0.37064843820784,2.00374841438788,0,0.316379424718726,0.571890581771475,0.255897791311334,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,1.21856744815642,3.16950440270266,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0.876901770507525,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,0,0.753150406214233,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,1.19115887728894,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0.798317485731266,0.957526850661834,0.211673582723883,0,4.7735520279288,0,7.36395510133209,0,0.169291777801603,0.321176150207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| ||
|short_description=p3@SRGN | |||
}} | }} |
Latest revision as of 00:29, 19 September 2015
Short description: | p3@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRGN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 79bp_to_X12765_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | P10124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.56e-57 | 98 |
blood island | 4.56e-57 | 98 |
bone marrow | 7.97e-54 | 76 |
hemolymphoid system | 1.34e-49 | 108 |
bone element | 2.09e-48 | 82 |
immune system | 1.65e-43 | 93 |
skeletal element | 2.58e-42 | 90 |
skeletal system | 1.93e-37 | 100 |
lateral plate mesoderm | 2.42e-34 | 203 |
musculoskeletal system | 5.30e-26 | 167 |
mesoderm | 2.40e-19 | 315 |
mesoderm-derived structure | 2.40e-19 | 315 |
presumptive mesoderm | 2.40e-19 | 315 |
connective tissue | 3.22e-19 | 371 |