FFCP PHASE1:Hg19::chr12:110293510..110293527,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:110293510..110293527,- | |||
|description=CAGE_peak_at_chr12:110293510..110293527,- | |description=CAGE_peak_at_chr12:110293510..110293527,- | ||
|id=chr12:110293510..110293527,- | |id=chr12:110293510..110293527,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000575;8.95e-15;2!CL:0000511;3.09e-08;1!CL:0002625;3.09e-08;1!CL:0000216;3.09e-08;1!CL:0000244;4.89e-08;4!CL:0000731;4.89e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,7.84e-15,2;CL:0000511,1.63e-08,1;CL:0002625,1.63e-08,1;CL:0000216,1.63e-08,1;CL:0000244,3.45e-08,4;CL:0000731,3.45e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.76e-09;1!UBERON:0010226;3.09e-08;1!UBERON:0005425;3.09e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.09e-08;1!UBERON:0002084;3.09e-08;1!UBERON:0001136;3.09e-08;1!UBERON:0000941;3.09e-08;1!UBERON:0001343;3.09e-08;1!UBERON:0001785;3.09e-08;1!UBERON:0002464;3.09e-08;1!UBERON:0004904;3.09e-08;1!UBERON:0001021;3.09e-08;1!UBERON:0002082;3.09e-08;1!UBERON:0004910;3.09e-08;1!UBERON:0004813;3.09e-08;1!UBERON:0000964;7.94e-08;4!UBERON:0010409;7.94e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.63e-08,1;UBERON:0001343,1.63e-08,1;UBERON:0004910,1.63e-08,1;UBERON:0005154,1.63e-08,1;UBERON:0005295,1.63e-08,1;UBERON:0004813,1.63e-08,1;UBERON:0005297,1.63e-08,1;UBERON:0005294,1.63e-08,1;UBERON:0010141,1.63e-08,1;UBERON:0005891,1.63e-08,1;UBERON:0007029,2.17e-08,1;UBERON:0000941,2.33e-08,1;UBERON:0001785,2.33e-08,1;UBERON:0002464,2.33e-08,1;UBERON:0004904,2.33e-08,1;UBERON:0001021,2.33e-08,1;UBERON:0003902,2.33e-08,1;UBERON:0005425,2.33e-08,1;UBERON:0002084,2.69e-08,1;UBERON:0002082,2.69e-08,1;UBERON:0010226,2.69e-08,1;UBERON:0000964,7.44e-08,4;UBERON:0010409,7.44e-08,4;UBERON:0004348,7.44e-08,4;UBERON:0005427,7.44e-08,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.929716147622738,0.411167888021826,0,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0.564727018627814,0.818718450173537,0.674170453335254,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.217188844705117,1.21079900526674,0,0,0.211255286311942,1.06302149982522,0,0.336985893439485,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,1.48313777113772,0,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0,0.286836620748814,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.491337269247072,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0.30648779579902,0.600952235626387,0.567160915800105,0,0,0.211931901159562,0,0.309157587715317,0,0.37223371266318,0,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0.439001141634502,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0.297262324577456,0,0,0.708875486211932,0.268675568108545,0.581267877027924,0,0,0.088048434013226,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0.532844358032199,0,1.08524321078289,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,0,0.224170287987055,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0.500170521059677,0.813795071099207,0.623912584592421,0.713715955188647,0.157702415033935,0.234282829985426,0.601892199455438,2.27407504055985,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.647142602455851,0.533637789017222,0.606255142892519,0,0,0.496215615637554,0,0,0.256278298511402,1.02341449813341,0,0,0.154209693802656,0.532685175939381,0.328508624055237,0,0.348631135379878,0.120859449591622,0.40101294060657,1.74953878978203,0.229628896329213,0.546273504020151,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.435050081742686,0,0.0890320356467374,1.4875642382488,0.384380134730212,0,0.708104465988849,0.464845549297286,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0,0.565621727814851,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0.282431402330337,0,1.68471475667626,2.21715076768338,0.459446800413919,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0.47003968731907,0,0.338583555603207,0.321176150207399,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0.10893846351899,0.278847488557207,0.615602068030377,0,0,0.269272933229316,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.5307453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| ||
|short_description=p@chr12:110293510..110293527,- | |short_description=p@chr12:110293510..110293527,- | ||
}} | }} |
Latest revision as of 04:48, 24 July 2015
Short description: | p@chr12:110293510..110293527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:110293510..110293527, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 7.84e-15 | 2 |
androgen binding protein secreting cell | 1.63e-08 | 1 |
seminiferous tubule epithelial cell | 1.63e-08 | 1 |
Sertoli cell | 1.63e-08 | 1 |
transitional epithelial cell | 3.45e-08 | 4 |
urothelial cell | 3.45e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.63e-08 | 1 |
seminiferous tubule of testis | 1.63e-08 | 1 |
epithelium of male gonad | 1.63e-08 | 1 |
epithelial cord | 1.63e-08 | 1 |
sex cord | 1.63e-08 | 1 |
seminiferous tubule epithelium | 1.63e-08 | 1 |
testis sex cord | 1.63e-08 | 1 |
genital ridge | 1.63e-08 | 1 |
primitive sex cord of indifferent gonad | 1.63e-08 | 1 |
coelomic epithelium | 1.63e-08 | 1 |
surface | 2.17e-08 | 1 |
cranial nerve II | 2.33e-08 | 1 |
cranial nerve | 2.33e-08 | 1 |
nerve trunk | 2.33e-08 | 1 |
nerve connecting eye with brain | 2.33e-08 | 1 |
nerve | 2.33e-08 | 1 |
retinal neural layer | 2.33e-08 | 1 |
presumptive neural retina | 2.33e-08 | 1 |
heart left ventricle | 2.69e-08 | 1 |
cardiac ventricle | 2.69e-08 | 1 |
future cardiac ventricle | 2.69e-08 | 1 |
cornea | 7.44e-08 | 4 |
eye surface | 7.44e-08 | 4 |
optic eminence | 7.44e-08 | 4 |
corneal primordium | 7.44e-08 | 4 |