FFCP PHASE1:Hg19::chr12:109219937..109219944,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54434 | |EntrezGene=54434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30579 | |HGNC=30579 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1D9 | |UniProt=F8W1D9 | ||
|association_with_transcript=117bp_to_ENST00000546697_5end | |association_with_transcript=117bp_to_ENST00000546697_5end | ||
|cluster_id=chr12:109219937..109219944,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_14_at_SSH1_5end | |description=CAGE_peak_14_at_SSH1_5end | ||
|id=chr12:109219937..109219944,- | |id=chr12:109219937..109219944,- | ||
|ontology_enrichment_celltype=CL:0000840!1.71e-07!5;CL:0001029!1.71e-07!5 | |ontology_enrichment_celltype=CL:0000840!1.71e-07!5;CL:0001029!1.71e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002593;9.86e-18;2!CL:0000148;3.71e-14;10!CL:0002567;2.74e-12;3!CL:0000147;2.08e-10;14!CL:1000306;1.50e-09;4!CL:0002547;1.50e-09;4!CL:0000097;5.73e-08;5!CL:0002595;6.78e-08;5!CL:0000710;1.42e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.27e-17,2;CL:0000148,3.25e-14,10;CL:0000541,3.25e-14,10;CL:0002567,2.31e-12,3;CL:0000147,1.90e-10,14;CL:1000306,1.57e-09,4;CL:0002547,1.57e-09,4;CL:0000097,5.73e-08,5;CL:0002028,5.73e-08,5;CL:0002595,7.49e-08,5;CL:0000710,1.33e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.48e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002118!6.13e-09!5;UBERON:0004532!6.13e-09!5 | |ontology_enrichment_uberon=UBERON:0002118!6.13e-09!5;UBERON:0004532!6.13e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.86e-18;2!UBERON:0004797;1.50e-09;4!UBERON:0000415;1.50e-09;4!UBERON:0007240;1.50e-09;4!UBERON:0005742;1.50e-09;4!UBERON:0005734;1.50e-09;4!UBERON:0004664;1.50e-09;4!UBERON:0004663;1.50e-09;4!UBERON:0003834;6.78e-08;5!UBERON:0001533;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.27e-17,2;UBERON:0000415,1.57e-09,4;UBERON:0007240,1.57e-09,4;UBERON:0005742,1.57e-09,4;UBERON:0005734,1.57e-09,4;UBERON:0004664,1.57e-09,4;UBERON:0004663,1.57e-09,4;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5 | |||
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| ||
|short_description=p14@SSH1 | |short_description=p14@SSH1 | ||
}} | }} |
Latest revision as of 05:38, 16 September 2015
Short description: | p14@SSH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SSH1_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | 117bp_to_ENST00000546697_5end |
EntrezGene: | SSH1 |
HGNC: | 30579 |
UniProt: | F8W1D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.27e-17 | 2 |
melanocyte | 3.25e-14 | 10 |
melanoblast | 3.25e-14 | 10 |
light melanocyte | 2.31e-12 | 3 |
pigment cell | 1.90e-10 | 14 |
fibroblast of tunica adventitia of artery | 1.57e-09 | 4 |
fibroblast of the aortic adventitia | 1.57e-09 | 4 |
mast cell | 5.73e-08 | 5 |
basophil mast progenitor cell | 5.73e-08 | 5 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
neurecto-epithelial cell | 1.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.27e-17 | 2 |
artery wall | 1.57e-09 | 4 |
tunica adventitia of artery | 1.57e-09 | 4 |
adventitia | 1.57e-09 | 4 |
tunica adventitia of blood vessel | 1.57e-09 | 4 |
aorta tunica adventitia | 1.57e-09 | 4 |
aorta wall | 1.57e-09 | 4 |
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |