FFCP PHASE1:Hg19::chr10:6622426..6622477,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:6622426..6622477,+
|short_description=p1@uc001ijl.2
|description=CAGE_peak_1_at_uc001ijl.2_5end
|association_with_transcript=-23bp_to_uc001ijl.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_uc001ijl.2_5end | |||
|cluster_id=chr10:6622426..6622477,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_uc001ijl.2_5end | |||
|id=chr10:6622426..6622477,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.47e-13!25;CL:0000827!6.47e-13!25;CL:0000791!1.74e-12!18;CL:0000789!1.74e-12!18;CL:0002420!1.74e-12!18;CL:0002419!1.74e-12!18;CL:0000790!1.74e-12!18;CL:0000625!2.21e-08!11;CL:0000542!7.43e-07!53;CL:0000051!7.43e-07!53;CL:0000838!8.81e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.37e-15;25!CL:0000791;9.36e-15;18!CL:0000789;9.36e-15;18!CL:0002419;9.36e-15;18!CL:0000625;8.68e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.53e-15,25;CL:0000827,1.53e-15,25;CL:0000791,1.08e-14,18;CL:0000789,1.08e-14,18;CL:0002420,1.08e-14,18;CL:0002419,1.08e-14,18;CL:0000790,1.08e-14,18;CL:0000542,5.45e-10,53;CL:0000051,5.45e-10,53;CL:0000838,6.58e-10,52;CL:0000625,9.23e-10,11;CL:0000988,9.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.36e-15;18 | |||
|ontology_enrichment_disease=DOID:1240!1.52e-12!39;DOID:2531!3.52e-12!51;DOID:0060083!3.52e-12!51;DOID:8692!3.01e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.15e-12;31!DOID:1240;3.31e-11;39!DOID:2531;3.09e-09;51!DOID:0060083;3.09e-09;51!DOID:1036;5.18e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.20e-14,39;DOID:2531,9.20e-14,51;DOID:0060083,9.20e-14,51;DOID:8692,8.30e-13,31;DOID:1036,5.25e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0005743!1.77e-12!86;UBERON:0001049!2.96e-12!57;UBERON:0005068!2.96e-12!57;UBERON:0006241!2.96e-12!57;UBERON:0007135!2.96e-12!57;UBERON:0001017!1.67e-11!82;UBERON:0000153!4.18e-11!129;UBERON:0007811!4.18e-11!129;UBERON:0001893!1.96e-10!34;UBERON:0002020!2.71e-10!34;UBERON:0003528!2.71e-10!34;UBERON:0002616!3.91e-10!59;UBERON:0002791!4.67e-10!33;UBERON:0000073!6.33e-10!94;UBERON:0001016!6.33e-10!94;UBERON:0003075!8.47e-10!86;UBERON:0007284!8.47e-10!86;UBERON:0001869!1.48e-09!32;UBERON:0002780!2.49e-09!41;UBERON:0001890!2.49e-09!41;UBERON:0006240!2.49e-09!41;UBERON:0003080!3.17e-09!42;UBERON:0000955!3.92e-09!69;UBERON:0006238!3.92e-09!69;UBERON:0000033!4.03e-09!123;UBERON:0003056!4.37e-09!61;UBERON:0002346!2.25e-08!90;UBERON:0000178!2.28e-08!15;UBERON:0000179!2.28e-08!15;UBERON:0000463!2.28e-08!15;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0002619!3.04e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.66e-10;34!UBERON:0003528;6.91e-10;34!UBERON:0002020;6.91e-10;34!UBERON:0000178;9.36e-10;15!UBERON:0000179;9.36e-10;15!UBERON:0000463;9.36e-10;15!UBERON:0001869;1.04e-09;32!UBERON:0002791;1.12e-09;32!UBERON:0002780;5.10e-08;41!UBERON:0001890;5.10e-08;41!UBERON:0000956;5.45e-08;25!UBERON:0000203;5.45e-08;25!UBERON:0002619;1.27e-07;22!UBERON:0000073;1.61e-07;53!UBERON:0002616;1.61e-07;53!UBERON:0002390;3.69e-07;32!UBERON:0001950;5.19e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.24e-16,114;UBERON:0001049,1.47e-13,56;UBERON:0005068,1.47e-13,56;UBERON:0006241,1.47e-13,56;UBERON:0007135,1.47e-13,56;UBERON:0000073,1.40e-12,53;UBERON:0002616,1.40e-12,53;UBERON:0003075,1.24e-11,82;UBERON:0007284,1.24e-11,82;UBERON:0001893,1.42e-11,34;UBERON:0001017,1.75e-11,81;UBERON:0003528,2.07e-11,34;UBERON:0002020,2.07e-11,34;UBERON:0003056,3.25e-11,61;UBERON:0002780,1.02e-10,41;UBERON:0001890,1.02e-10,41;UBERON:0003080,1.02e-10,41;UBERON:0006240,1.02e-10,41;UBERON:0002791,1.50e-10,32;UBERON:0001869,1.56e-10,32;UBERON:0002346,3.30e-10,86;UBERON:0000178,9.56e-10,15;UBERON:0000179,9.56e-10,15;UBERON:0000463,9.56e-10,15;UBERON:0001016,2.91e-09,89;UBERON:0010371,2.96e-09,104;UBERON:0000955,3.84e-09,68;UBERON:0006238,3.84e-09,68;UBERON:0000956,5.43e-08,25;UBERON:0000203,5.43e-08,25;UBERON:0002619,9.32e-08,22;UBERON:0001950,4.14e-07,20 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.09340350391728,3.05817920982241,2.11013582582763,0.123766352960047,0.662794751455832,0,0,0,0,2.46242116153576,0.816002764977012,1.56727360739044,1.43117993565528,3.01123735160345,1.12988375635323,3.2857764471619,3.61242593579761,3.30585281517453,1.96682138424452,4.60595277716655,1.70297735647684,3.67768489791571,2.10844143144775,2.9580320813343,2.86628642147116,0.710846162437108,11.450417134059,2.21598163412751,1.60435557976113,3.25516306073778,0.223915474239924,3.2389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0,0,0,0.236482229888585,1.03423704220986,0,0,0,1.09162460023138,0.674170453335254,0,1.28371610830437,0,0,0.598390972864896,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,0.217188844705117,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0.285012743741249,0,0,0,1.63841583378639,0,0,0,0,0,0,0,0,0,11.8954195721123,3.92355994087075,15.0128928321794,10.4256178160332,12.5763444079733,10.074473450976,47.9825241771246,43.3476614622675,58.2340801053722,62.3445530905316,37.879555340959,35.0581029895056,38.9899654467173,36.8293254720421,35.6093868837377,30.6940060241313,23.350182453722,25.9769016718697,30.1395209164455,39.295939237946,52.4380023055838,41.8142095219907,25.9478394777427,32.5737419561633,34.7063719937456,32.6395402705159,34.4050647470024,42.9715079545236,49.4235063113155,31.169049649099,33.1485322889944,22.4875307794223,38.3579148311307,41.0563998460523,10.0803371612366,6.95344509037119,13.3238451572175,0,0.670700859703636,0.12786256184353,0,0,0.434539556882471,0,0,1.70162670895322,0.665188192387692,1.22968699970376,3.66741411393595,4.00724817121796,2.96627554227544,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,1.46296476575767,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,1.25019619597712,0.898117490504679,0.900891843866578,1.53316637465883,0,1.46561395144326,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0.808264032418128,0.163461903113459,0.454072282934794,0,1.87457145467037,0,0,0.298897361103602,0.822041490506354,0.971237666208789,0.842704840213491,0,0.61417158655884,0,0,0,0,0,0.505008341862199,0.875829639103749,0.277064115484183,0,0,0.300476117813194,0.340296549480063,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0,0,0,0,0,0,0.484938170456436,0,0,0.169560592310488,2.31913023795956,1.90922284413584,1.72082757233402,5.97671160035017,8.0843158676106,6.9716365721711,6.53064646596834,9.33587148239825,6.20461510428911,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0,20.3073025730739,2.21379189377604,0.343135620597051,1.31700342490351,3.37205259772859,1.40740561376283,3.24059558054854,2.6064664424826,0,0,2.43453850447661,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,7.49870671894216,3.02367830757947,3.26082723657489,4.83616022595381,5.81267877027924,0.766765358330422,1.97065295158377,5.01876073875388,0.207328115540772,0.288239906833923,0,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,1.00917975910825,0.87192013766656,0.22001485746285,0.387815147273333,0,0,0.26593811658487,0,1.80045161983499,1.41849132023278,2.66422179016099,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,13.4502172792233,10.836691811106,6.68445482064504,10.2674429023799,0.508189248444927,2.60279707715243,2.31986643833309,2.34522771468088,1.27587750330633,0,0,0.828831026872071,0,0,0.813795071099207,0.623912584592421,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.737476674166813,0.347534457872331,1.17480694477644,0,10.7519373583901,6.25571182373989,8.96511485548932,1.81876542867756,0,2.11673205330776,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,3.50492403815704,0.601519410909855,1.28913384510255,0.114814448164607,0,0.262248829918848,1.80479845162965,1.23224539367064,3.13739907670742,2.92278449306521,2.00548094896464,2.27466768141793,0.510281115829547,0.647747748306418,3.08454505380579,1.62567862526312,1.50506932156456,1.27438136522519,0.831076008928724,1.11937377361089,2.63111851975121,3.13722541229881,2.05160100093111,2.95213181129735,5.20605431462885,0.412164046590889,0,0,3.44559322797703,0.650060246036521,0,0.676695028044854,0.308097234229289,0,0.551346289938122,0.214840489736547,0.435050081742686,0.93749290157711,0.267096106940212,1.65284915360978,1.72971060628596,2.55225424989168,0.809262246844399,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0.717056761020258,0.5894942460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| ||
|short_description=p1@uc001ijl.2 | |||
}} | }} |
Latest revision as of 14:49, 23 July 2015
Short description: | p1@uc001ijl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001ijl.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -23bp_to_uc001ijl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.53e-15 | 25 |
pro-T cell | 1.53e-15 | 25 |
mature alpha-beta T cell | 1.08e-14 | 18 |
alpha-beta T cell | 1.08e-14 | 18 |
immature T cell | 1.08e-14 | 18 |
mature T cell | 1.08e-14 | 18 |
immature alpha-beta T cell | 1.08e-14 | 18 |
lymphocyte | 5.45e-10 | 53 |
common lymphoid progenitor | 5.45e-10 | 53 |
lymphoid lineage restricted progenitor cell | 6.58e-10 | 52 |
CD8-positive, alpha-beta T cell | 9.23e-10 | 11 |
hematopoietic cell | 9.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.24e-16 | 114 |
neural tube | 1.47e-13 | 56 |
neural rod | 1.47e-13 | 56 |
future spinal cord | 1.47e-13 | 56 |
neural keel | 1.47e-13 | 56 |
regional part of nervous system | 1.40e-12 | 53 |
regional part of brain | 1.40e-12 | 53 |
neural plate | 1.24e-11 | 82 |
presumptive neural plate | 1.24e-11 | 82 |
telencephalon | 1.42e-11 | 34 |
central nervous system | 1.75e-11 | 81 |
brain grey matter | 2.07e-11 | 34 |
gray matter | 2.07e-11 | 34 |
pre-chordal neural plate | 3.25e-11 | 61 |
regional part of forebrain | 1.02e-10 | 41 |
forebrain | 1.02e-10 | 41 |
anterior neural tube | 1.02e-10 | 41 |
future forebrain | 1.02e-10 | 41 |
regional part of telencephalon | 1.50e-10 | 32 |
cerebral hemisphere | 1.56e-10 | 32 |
neurectoderm | 3.30e-10 | 86 |
blood | 9.56e-10 | 15 |
haemolymphatic fluid | 9.56e-10 | 15 |
organism substance | 9.56e-10 | 15 |
nervous system | 2.91e-09 | 89 |
ecto-epithelium | 2.96e-09 | 104 |
brain | 3.84e-09 | 68 |
future brain | 3.84e-09 | 68 |
cerebral cortex | 5.43e-08 | 25 |
pallium | 5.43e-08 | 25 |
regional part of cerebral cortex | 9.32e-08 | 22 |
neocortex | 4.14e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.20e-14 | 39 |
hematologic cancer | 9.20e-14 | 51 |
immune system cancer | 9.20e-14 | 51 |
myeloid leukemia | 8.30e-13 | 31 |
chronic leukemia | 5.25e-07 | 8 |