FFCP PHASE1:Hg19::chr10:6622404..6622421,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:6622404..6622421,+
|short_description=p2@LOC439949
|description=CAGE_peak_2_at_LOC439949_5end
|association_with_transcript=17bp_to_ENST00000455810,NR_0365...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=439949 | |EntrezGene=439949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000455810,NR_036502,NR_036503_5end | |||
|cluster_id=chr10:6622404..6622421,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_LOC439949_5end | |||
|id=chr10:6622404..6622421,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.48e-14!25;CL:0000827!4.48e-14!25;CL:0000791!2.87e-13!18;CL:0000789!2.87e-13!18;CL:0002420!2.87e-13!18;CL:0002419!2.87e-13!18;CL:0000790!2.87e-13!18;CL:0000542!9.06e-11!53;CL:0000051!9.06e-11!53;CL:0000838!9.46e-11!52;CL:0000625!3.82e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.43e-25;18!CL:0000789;4.43e-25;18!CL:0002419;4.43e-25;18!CL:0000084;1.50e-21;25!CL:0000625;3.47e-16;11!CL:0000624;5.82e-09;6!CL:0000898;8.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.58e-25,18;CL:0000789,5.58e-25,18;CL:0002420,5.58e-25,18;CL:0002419,5.58e-25,18;CL:0000790,5.58e-25,18;CL:0000084,2.35e-21,25;CL:0000827,2.35e-21,25;CL:0000625,2.31e-16,11;CL:0000838,8.37e-13,52;CL:0000542,1.88e-12,53;CL:0000051,1.88e-12,53;CL:0000037,2.14e-12,168;CL:0000988,3.40e-11,177;CL:0002032,4.24e-10,161;CL:0000837,4.24e-10,161;CL:0000624,7.54e-09,6;CL:0000898,1.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.43e-25;18 | |||
|ontology_enrichment_disease=DOID:2531!5.64e-14!51;DOID:0060083!5.64e-14!51;DOID:1240!8.43e-12!39;DOID:8692!3.88e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.42e-16;31!DOID:1240;2.64e-13;39!DOID:2531;1.50e-11;51!DOID:0060083;1.50e-11;51!DOID:1036;1.99e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.16e-17,39;DOID:8692,2.24e-17,31;DOID:2531,9.80e-17,51;DOID:0060083,9.80e-17,51;DOID:1036,2.13e-11,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-09,4;UBERON:0005058,3.03e-09,4;UBERON:0009113,3.03e-09,4;UBERON:0003295,3.03e-09,4;UBERON:0005562,3.03e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.821246550437305,0.502170558379211,0.840547463227464,0.410502947249729,0.236132343941038,0,0,0,0,0.30120591877825,0,0.852139206383318,0.426507697462265,2.34880351467878,0,0.200544447470142,0.651032612147555,0,0.647787332037959,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90810750907073,0,0,0,0,0,3.16060901730092,1.7703879310245,1.17903228824749,0.616804496998528,2.50779743086017,3.2592226663359,3.78758244587787,9.74133642039557,3.00808233589969,2.06224135232386,3.32300841875432,1.08321545506006,2.43373507478783,2.34106825607781,1.97325485524411,1.65810010671509,0.869409257205157,3.26230438956533,2.94294910898684,5.22677619024884,2.03956816855619,3.06576394881537,3.09264700934367,2.53019692019503,5.41561204350964,6.51083453856419,5.70271226669025,3.46322773878877,3.32765189001488,3.74792179657038,2.8413270245282,2.46338399076314,0.80642697289893,0.534880391567015,2.46201486600758,0,0,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0.614843499851882,0.72038491523742,2.18577172975525,2.22470665670658,0.649094787309367,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0.937285727335186,0,0.570471821544449,0.149448680551801,0.469737994575059,0.647491777472526,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.545492241181669,0.286804595389004,1.58565817968474,1.32529768321485,0.580969714347592,1.34759371519982,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,3.97316789473185,0.860919069801795,0.343135620597051,0.658501712451753,1.1240175325762,0.402115889646523,0.648119116109707,0.977424915930974,0,0,0.34779121492523,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.626909658919938,1.45316969256981,0,0,0.616339038092582,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,1.12085143993527,2.95546140302891,0.215627574859517,0.898401253958239,0.508189248444927,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.86091223510599,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0.552485933615378,0.114814448164607,0,0,2.25599806453706,0.385076685522074,0.784349769176855,0,0.844413031143006,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.509752546090077,1.66215201785745,0.447749509444357,0,0,0,0,1.30151357865721,0.309123034943167,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.330569830721956,0.192190067365106,0.893288987462089,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.392996164052485,0.35667105148125,0,0,0,0.379473173765715,0.699869440489966,0.384888450902048,1.34060455107157,0,0,0,0,0.443430153536676,0,0,0,2.27858874869665,1.19115887728894,0.822724546172388,0.648473311192717,0,1.58625035258854,0.640944426764839,0,0,0.185803175125719,0.721346064882224,1.42283686696828,0.797131363644112,2.59453182862662,2.48956981172077,2.75175657541048,3.89546328329467,2.24637742490767,0.684704037099577,0.94007937463814,2.50634477090067,2.20079311142084,1.1241165257259,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,1.39203086947621,0,2.43410110628385,2.33150377598474,0,0,0,1.21360521749513,0,1.13654458722565,0,0,0,0,0.281338832821026,0.445234820091624,0.824019371133798,0,0.19924798825107,0,0.755798243562828,0.20453736500431,0.123084805461069,0,0,0.537063524026827,0.511572370226872,0.0986434056369336,4.7896618469388,0,0.969332746095218,0.278304294485554,0,0,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.384751292518985,0,0,0.269272933229316,0.325942115766024,0,0,0,1.02193298195737,2.5116841023204,1.16348177330109,1.1279783030859,1.56850027454192,1.67821586975843,0.569261198172555,2.2251121057253,0.421996129056054,0,0.989471500037586,0,0,0.265372693510018,0,0,0.123563938946503,0.417687798021821,0.404406797884062,0,0.937057782901357,0,0.391329237864179,0.242780379534093,0,1.20990716048664,0.3060727616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| ||
|short_description=p2@LOC439949 | |||
}} | }} |
Latest revision as of 21:21, 18 September 2015
Short description: | p2@LOC439949 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC439949_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 17bp_to_ENST00000455810, NR_036502, NR_036503_5end |
EntrezGene: | LOC439949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.58e-25 | 18 |
alpha-beta T cell | 5.58e-25 | 18 |
immature T cell | 5.58e-25 | 18 |
mature T cell | 5.58e-25 | 18 |
immature alpha-beta T cell | 5.58e-25 | 18 |
T cell | 2.35e-21 | 25 |
pro-T cell | 2.35e-21 | 25 |
CD8-positive, alpha-beta T cell | 2.31e-16 | 11 |
lymphoid lineage restricted progenitor cell | 8.37e-13 | 52 |
lymphocyte | 1.88e-12 | 53 |
common lymphoid progenitor | 1.88e-12 | 53 |
hematopoietic stem cell | 2.14e-12 | 168 |
hematopoietic cell | 3.40e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.24e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-10 | 161 |
CD4-positive, alpha-beta T cell | 7.54e-09 | 6 |
naive T cell | 1.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.03e-09 | 4 |
hemolymphoid system gland | 3.03e-09 | 4 |
thymic region | 3.03e-09 | 4 |
pharyngeal gland | 3.03e-09 | 4 |
thymus primordium | 3.03e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.16e-17 | 39 |
myeloid leukemia | 2.24e-17 | 31 |
hematologic cancer | 9.80e-17 | 51 |
immune system cancer | 9.80e-17 | 51 |
chronic leukemia | 2.13e-11 | 8 |