FFCP PHASE1:Hg19::chr12:108154309..108154359,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11108 | |EntrezGene=11108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9348 | |HGNC=9348 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRG2 | |UniProt=F8VRG2 | ||
|association_with_transcript=345bp_to_ENST00000547188_5end | |association_with_transcript=345bp_to_ENST00000547188_5end | ||
|cluster_id=chr12:108154309..108154359,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_6_at_PRDM4_5end | |description=CAGE_peak_6_at_PRDM4_5end | ||
|id=chr12:108154309..108154359,- | |id=chr12:108154309..108154359,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.83e-16;13!CL:0000945;1.10e-08;24!CL:0002593;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.92e-15,14;CL:0000945,1.09e-08,24;CL:0000826,1.09e-08,24;CL:0000838,2.12e-08,52;CL:0000542,3.10e-08,53;CL:0000051,3.10e-08,53;CL:0002593,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.12e-07,2 | |||
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| ||
|short_description=p6@PRDM4 | |short_description=p6@PRDM4 | ||
}} | }} |
Latest revision as of 03:51, 16 September 2015
Short description: | p6@PRDM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRDM4_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 345bp_to_ENST00000547188_5end |
EntrezGene: | PRDM4 |
HGNC: | 9348 |
UniProt: | F8VRG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.92e-15 | 14 |
lymphocyte of B lineage | 1.09e-08 | 24 |
pro-B cell | 1.09e-08 | 24 |
lymphoid lineage restricted progenitor cell | 2.12e-08 | 52 |
lymphocyte | 3.10e-08 | 53 |
common lymphoid progenitor | 3.10e-08 | 53 |
smooth muscle cell of the internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.12e-07 | 2 |