FFCP PHASE1:Hg19::chr10:63809134..63809145,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:63809134..63809145,+
|short_description=p6@ARID5B
|description=CAGE_peak_6_at_ARID5B_5end
|association_with_transcript=164bp_to_ENST00000309334,NM_0012446...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84159 | |EntrezGene=84159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17362 | |HGNC=17362 | ||
|TSSclassifier=strong | |||
|UniProt=Q14865 | |UniProt=Q14865 | ||
|association_with_transcript=164bp_to_ENST00000309334,NM_001244638,uc001jlu.1_5end | |||
|cluster_id=chr10:63809134..63809145,+ | |||
|coexpression_cluster_id=C1319 | |||
|description=CAGE_peak_6_at_ARID5B_5end | |||
|id=chr10:63809134..63809145,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.06e-19!180;CL:0000057!5.43e-13!75;CL:0002620!1.81e-08!23;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57;CL:0000187!7.02e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000134;4.45e-09;55!CL:0002620;1.30e-08;23!CL:0000048;2.42e-08;58!CL:0000723;4.79e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.76e-14,76;CL:0002620,4.37e-09,23;CL:0000680,1.13e-07,58;CL:0000056,1.13e-07,58;CL:0000355,1.13e-07,58;CL:0000187,4.48e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.57e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.13e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.77e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.06e-10!83;UBERON:0002329!5.06e-10!83;UBERON:0003077!5.06e-10!83;UBERON:0003059!5.06e-10!83;UBERON:0007282!5.06e-10!83;UBERON:0009618!5.06e-10!83;UBERON:0007285!5.06e-10!83;UBERON:0004290!3.93e-09!70;UBERON:0002385!9.47e-09!63;UBERON:0001015!9.47e-09!63;UBERON:0000383!9.47e-09!63;UBERON:0001134!1.29e-08!61;UBERON:0002036!1.29e-08!61;UBERON:0003082!1.29e-08!61;UBERON:0000475!6.97e-08!365;UBERON:0000486!1.95e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.14e-10,73;UBERON:0002329,1.23e-09,71;UBERON:0003059,1.23e-09,71;UBERON:0007282,1.23e-09,71;UBERON:0004290,1.23e-09,71;UBERON:0009618,1.23e-09,71;UBERON:0003077,1.62e-09,72;UBERON:0007285,1.62e-09,72;UBERON:0002385,4.42e-09,64;UBERON:0001015,4.42e-09,64;UBERON:0000383,4.42e-09,64;UBERON:0001134,6.23e-09,62;UBERON:0002036,6.23e-09,62;UBERON:0003082,6.23e-09,62;UBERON:0003104,5.25e-08,160;UBERON:0009142,5.25e-08,160;UBERON:0007503,8.71e-08,78;UBERON:0000486,9.13e-08,83;UBERON:0005256,9.89e-07,122 | |||
|phase1_expression=3.81524596468169,2.35510576280081,3.94672331468719,4.00293193412522,1.34088328328186,3.48935409640147,0,0.631719873426831,4.17897005119742,1.22866968250754,0,0.655324116390517,0.263766978228454,3.83675694176145,3.31397375727916,6.05092631806598,4.21886169616784,2.19093027116212,0.975865597581014,1.23121058076788,1.02000345622126,0.313454721478088,2.57612388417951,1.36874425072884,4.6450776650077,0,0,0,0,0,0.309632246632152,0,0,1.47901604066715,0,0.710846162437108,0,0,0.401088894940283,0.217010870715852,2.68698569087909,5.18229865630367,4.12120908214698,0.145398238779565,0,0,0,1.23350366406548,0.929119112685311,1.1507695692886,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.962787081228281,0,0,0,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,0,1.90810750907073,0.569212969109448,2.34894875748376,3.05818582500183,0,0.560508562981536,0,3.73748563216283,4.32311839024081,6.5792479679843,2.17342444007882,2.28145586643513,1.89379122293893,3.89653456815823,2.33961959458865,7.36514768687093,7.3106185212595,5.95768500283034,2.68991771423918,1.56071217071854,0.986627427622057,0.552700035571697,1.15921234294021,0.593146252648242,0.802622484269139,1.04535523804977,2.37949619664889,1.91610246800961,4.81078423675682,7.08455137654608,0.637130828648193,0,0.950452044448374,1.05402583354441,0.383959833463255,1.24930726552346,1.4206635122641,0.821127996921047,1.20964045934839,0,0.724122019413995,0,4.02420515822182,3.32442660793179,9.75885711438329,8.02140657017423,9.12533069453189,3.1811437882044,0.973269740605272,2.07976597760949,2.21729397462564,2.0202000709419,2.42311289670768,0.728590576585084,0,0,0.870648686496336,0,0,0,0,0.79504962946682,0,1.38856200643038,0,0,1.10047216776027,0.208994966536811,0.775250277507987,1.42306505074684,1.00416183829401,2.01414658554573,0.760272105718513,2.19655851793353,1.83831540172934,0,1.16089646769304,1.12264686313085,0.900891843866578,0,0,0.183201743930407,0,0,0,10.933382937297,5.82500353657067,15.6242833359598,6.3104056564739,2.83734705758686,3.36406560085384,4.2699598291882,1.97334038733728,10.2699641681923,3.09834545760283,1.9615428373615,2.4217188423189,1.72852777344,0.70296429550139,1.87296046098192,1.71141546463335,1.64393548606981,2.46612447151906,3.23745888736263,2.80901613404497,2.65400422631361,2.45668634623536,4.44300859055791,3.56400857184616,3.21447008062124,2.73048408581408,1.43723628363248,1.34668891163253,1.62654075833553,8.86605169549385,4.38977620880838,3.0648779579902,4.20666564938471,3.85669422744072,7.71375433462106,6.19316427573846,5.72216133130817,5.40163972951924,7.00757198821385,8.50213782150576,4.83903826462134,7.76371128309825,4.96928726322113,11.8643873894734,5.98324341174946,13.9015608864178,11.3603069605317,3.62707553619505,3.89989362314122,0.57978255948989,0.818238361772504,1.43402297694502,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,4.69348596989448,5.14592750554308,0,5.57241513638375,2.16563844500876,0.236613600079688,0,0,0.220587945464788,0,0,0.404493924480493,0.392442930250692,0,0.738155454624648,0,2.4694440679884,0,0,0,1.18157981336281,0,0.860919069801795,2.40194934417936,0.219500570817251,0,0.201057944823262,0.740707561268237,0.977424915930974,2.07986957055916,0,1.97081688457631,6.45747818297019,4.76409277611544,3.70388410061289,8.18092854608773,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,1.6798212819886,0.567100388969546,1.07470227243418,0,0.766765358330422,12.3165809473986,0.264145302039678,10.1590776614978,5.04419836959365,3.40854570251226,2.15892840593375,3.4378958300245,1.17217447210047,1.71072446022705,0.925447434329912,0.901029173531752,2.28661146104463,2.35475277125258,3.48768055066624,2.27348686044945,7.36848779819333,0,1.690605505112,5.31876233169741,5.2003718455683,2.31486636835928,0,0,5.7191197463259,3.25572963234866,1.64648067356154,4.23457039581856,4.97548728239564,1.58390374586686,5.12446941001296,4.35766729300147,6.89813639156194,0,0,0,6.23024624278115,3.44585807502342,5.70547620162874,2.17171960001369,4.52047909610843,3.58121926479791,0,1.18218456121156,2.15627574859517,2.43851768931522,3.55732473911449,1.30139853857622,1.54657762555539,0.167516265334349,3.82763250991898,0,0,0.414415513436035,5.64380861908043,1.50051156317903,1.35632511849868,6.65506756898583,7.67244651827796,4.88877486605197,5.15422225967938,3.31040709700491,2.27407504055985,2.0694614258501,3.98535359121262,3.87175253937577,8.86212867574445,1.37060810223918,0.343143423810856,1.44737618286021,0.862856803274467,0.533637789017222,0.606255142892519,0,0.604780586659361,5.45837177201309,9.51464234385987,4.2099014164961,5.89440086576224,8.69902323413396,4.82561763430822,1.48418066444991,2.92998418225046,0.710246901252508,2.62806899244189,1.03850885836724,2.20799719073923,0.846016147141356,0,0,5.166650167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| ||
|short_description=p6@ARID5B | |||
}} | }} |
Latest revision as of 18:30, 18 September 2015
Short description: | p6@ARID5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARID5B_5end |
Coexpression cluster: | C1319_skeletal_mesodermal_sacrococcigeal_mature_astrocytoma_lung_adipose |
Association with transcript: | 164bp_to_ENST00000309334, NM_001244638, uc001jlu.1_5end |
EntrezGene: | ARID5B |
HGNC: | 17362 |
UniProt: | Q14865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.76e-14 | 76 |
skin fibroblast | 4.37e-09 | 23 |
muscle precursor cell | 1.13e-07 | 58 |
myoblast | 1.13e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-07 | 58 |
muscle cell | 4.48e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 8.14e-10 | 73 |
somite | 1.23e-09 | 71 |
presomitic mesoderm | 1.23e-09 | 71 |
presumptive segmental plate | 1.23e-09 | 71 |
dermomyotome | 1.23e-09 | 71 |
trunk paraxial mesoderm | 1.23e-09 | 71 |
paraxial mesoderm | 1.62e-09 | 72 |
presumptive paraxial mesoderm | 1.62e-09 | 72 |
muscle tissue | 4.42e-09 | 64 |
musculature | 4.42e-09 | 64 |
musculature of body | 4.42e-09 | 64 |
skeletal muscle tissue | 6.23e-09 | 62 |
striated muscle tissue | 6.23e-09 | 62 |
myotome | 6.23e-09 | 62 |
mesenchyme | 5.25e-08 | 160 |
entire embryonic mesenchyme | 5.25e-08 | 160 |
epithelial vesicle | 8.71e-08 | 78 |
multilaminar epithelium | 9.13e-08 | 83 |
trunk mesenchyme | 9.89e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.77e-08 | 14 |