FFCP PHASE1:Hg19::chr10:63806474..63806496,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:63806474..63806496,+
|short_description=p@chr10:63806474..63806496,+
|description=CAGE_peak_at_chr10:63806474..63806496,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:63806474..63806496,+ | |||
|coexpression_cluster_id=C1590 | |||
|description=CAGE_peak_at_chr10:63806474..63806496,+ | |||
|id=chr10:63806474..63806496,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.99e-51!140;CL:0002087!6.23e-45!119;CL:0002031!6.78e-43!124;CL:0000037!2.47e-40!172;CL:0000566!2.47e-40!172;CL:0002032!4.89e-39!165;CL:0000837!4.89e-39!165;CL:0000988!7.86e-39!182;CL:0002057!3.40e-33!42;CL:0000860!3.65e-30!45;CL:0000766!7.46e-29!76;CL:0000839!5.95e-23!70;CL:0000557!1.91e-22!71;CL:0000945!8.48e-21!24;CL:0000826!8.48e-21!24;CL:0000542!1.00e-20!53;CL:0000051!1.00e-20!53;CL:0002194!2.90e-20!63;CL:0000576!2.90e-20!63;CL:0000040!2.90e-20!63;CL:0000559!2.90e-20!63;CL:0000838!5.48e-20!52;CL:0002009!2.75e-19!65;CL:0000763!2.70e-18!112;CL:0000049!2.70e-18!112;CL:0000236!4.55e-18!14;CL:0000134!3.72e-16!358;CL:0002320!6.53e-16!365;CL:0000219!2.56e-13!390;CL:0000048!1.21e-10!430;CL:0000723!3.97e-10!436;CL:0000034!5.69e-10!444;CL:0002393!7.41e-09!9;CL:0002397!7.41e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.18e-38;13!CL:0000945;1.44e-23;24!CL:0000860;2.86e-12;33!CL:0002057;2.86e-12;33!CL:0000542;6.33e-12;53!CL:0000766;1.23e-09;69!CL:0002087;1.38e-09;104!CL:0000771;2.27e-09;2!CL:0000473;4.73e-09;39!CL:0000234;4.73e-09;39!CL:0000097;9.78e-09;5!CL:0000094;2.34e-08;8!CL:0000576;2.03e-07;48!CL:0000738;7.16e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.01e-35,14;CL:0000738,1.07e-33,136;CL:0002031,3.25e-26,120;CL:0000037,9.98e-26,168;CL:0002087,3.19e-25,115;CL:0000988,5.30e-24,177;CL:0002032,7.27e-24,161;CL:0000837,7.27e-24,161;CL:0000945,1.06e-23,24;CL:0000826,1.06e-23,24;CL:0000766,1.12e-17,72;CL:0000838,2.84e-15,52;CL:0000542,6.43e-15,53;CL:0000051,6.43e-15,53;CL:0000860,2.40e-13,42;CL:0002057,2.40e-13,42;CL:0000839,5.57e-12,66;CL:0000557,9.43e-12,67;CL:0000473,2.46e-11,48;CL:0000234,2.46e-11,48;CL:0000763,2.64e-10,108;CL:0000049,2.64e-10,108;CL:0000771,1.81e-09,2;CL:0000097,9.56e-09,5;CL:0002028,9.56e-09,5;CL:0000134,1.34e-08,354;CL:0002194,1.56e-08,59;CL:0000576,1.56e-08,59;CL:0000040,1.56e-08,59;CL:0000559,1.56e-08,59;CL:0000094,1.90e-08,8;CL:0002320,2.85e-08,361;CL:0002009,3.57e-08,61;CL:0000219,4.00e-07,386;CL:0000898,9.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.33e-12;53!CL:0002057;1.14e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.34e-21!102;UBERON:0003061!6.34e-21!102;UBERON:0002193!6.75e-21!112;UBERON:0002371!1.78e-18!80;UBERON:0001474!2.57e-16!86;UBERON:0002384!9.86e-15!375;UBERON:0002405!6.08e-14!115;UBERON:0004765!6.10e-13!101;UBERON:0001434!6.10e-13!101;UBERON:0003081!3.47e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.95e-13,98;UBERON:0003061,3.95e-13,98;UBERON:0002193,8.97e-13,108;UBERON:0002371,5.79e-10,76;UBERON:0002405,7.26e-10,93;UBERON:0001474,5.43e-09,82;UBERON:0004765,6.70e-08,90;UBERON:0002384,7.95e-08,371;UBERON:0001434,8.67e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,1.57345710739562,1.15148819429164,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,1.10799081706375,0.802177789880567,1.73608696572681,0,0.971680998056939,0,0.290796477559129,0.377875943688809,0,0.929716147622738,1.23350366406548,1.23882548358041,0.575384784644301,1.0246428261164,1.41889337933151,1.37898272294647,1.93645405075148,2.70852973188684,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,0.962787081228281,1.27867425159808,0,0.598390972864896,0,0.290209238628584,0,1.24564449799115,0,0,1.08594422352558,0.605399502633369,1.47311054395026,0.632924774881769,0.633765858935825,0.637812899895131,0.209658645508376,0.786300418025466,0.750884464207532,0.32145117339416,0.285012743741249,0.19891667719909,0,1.75996244461323,4.36910889009705,3.55803701545422,1.28019066769952,5.60554381850417,5.17277195959035,3.96626923670917,2.86216126360609,6.83055562931338,4.11066032559657,3.82273228125229,0,1.12101712596307,0,0.393419540227666,0,0,2.00623794468814,0,1.89379122293893,0,2.67385096524417,5.89211814949674,2.65840673500345,4.06205795647523,1.15282187753108,0.780356085359269,0.493313713811028,0,0,0,0,0,0.339928028092699,1.53288197440768,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,5.59785911960085,9.80015683235338,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.24060815673732,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,3.0448149595224,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,1.57345710739562,1.15148819429164,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,1.10799081706375,0.802177789880567,1.73608696572681,0,0.971680998056939,0,0.290796477559129,0.377875943688809,0,0.929716147622738,1.23350366406548,1.23882548358041,0.575384784644301,1.0246428261164,1.41889337933151,1.37898272294647,1.93645405075148,2.70852973188684,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,0.962787081228281,1.27867425159808,0,0.598390972864896,0,0.290209238628584,0,1.24564449799115,0,0,1.08594422352558,0.605399502633369,1.47311054395026,0.632924774881769,0.633765858935825,0.637812899895131,0.209658645508376,0.786300418025466,0.750884464207532,0.32145117339416,0.285012743741249,0.19891667719909,0,1.75996244461323,4.36910889009705,3.55803701545422,1.28019066769952,5.60554381850417,5.17277195959035,3.96626923670917,2.86216126360609,6.83055562931338,4.11066032559657,3.82273228125229,0,1.12101712596307,0,0.393419540227666,0,0,2.00623794468814,0,1.89379122293893,0,2.67385096524417,5.89211814949674,2.65840673500345,4.06205795647523,1.15282187753108,0.780356085359269,0.493313713811028,0,0,0,0,0,0.339928028092699,1.53288197440768,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,5.59785911960085,9.80015683235338,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.24060815673732,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,3.0448149595224,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr10:63806474..63806496,+ | |||
}} | }} |
Latest revision as of 14:36, 23 July 2015
Short description: | p@chr10:63806474..63806496, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63806474..63806496, + |
Coexpression cluster: | C1590_Mast_CD19_Basophils_CD4_Natural_Eosinophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.95e-13 | 98 |
blood island | 3.95e-13 | 98 |
hemolymphoid system | 8.97e-13 | 108 |
bone marrow | 5.79e-10 | 76 |
immune system | 7.26e-10 | 93 |
bone element | 5.43e-09 | 82 |
skeletal element | 6.70e-08 | 90 |
connective tissue | 7.95e-08 | 371 |
skeletal system | 8.67e-07 | 100 |