FFCP PHASE1:Mm9::chr9:5345414..5345435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12364 | |EntrezGene=12364 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3424 | |||
|TSSclassifier=NA | |||
|UniProt=O08736,D6RCG7,Q8BQQ5,D6RGM0 | |UniProt=O08736,D6RCG7,Q8BQQ5,D6RGM0 | ||
|association_with_transcript=-40bp_to_ENSMUST00000027009,ENSMUST00000151788,NM_009808,uc009obv.2,uc009obw.2,uc009obx.2,uc012gno.1,uc012gnp.1_5end | |association_with_transcript=-40bp_to_ENSMUST00000027009,ENSMUST00000151788,NM_009808,uc009obv.2,uc009obw.2,uc009obx.2,uc012gno.1,uc012gnp.1_5end | ||
|cluster_id=chr9:5345414..5345435,+ | |||
|description=CAGE_peak_2_at_Casp12_5end | |description=CAGE_peak_2_at_Casp12_5end | ||
|id=chr9:5345414..5345435,+ | |id=chr9:5345414..5345435,+ | ||
|ontology_enrichment_celltype=CL:0000107!8.72e-08!9 | |ontology_enrichment_celltype=CL:0000107!8.72e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.21e-20,9;CL:0002293,2.93e-08,3;CL:0002321,5.11e-08,70;CL:0000222,3.48e-07,7;CL:0000393,4.55e-07,39;CL:0000211,4.55e-07,39;CL:0000192,4.62e-07,3;CL:0000359,4.62e-07,3;CL:0002539,4.62e-07,3;CL:0000514,4.62e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.66e-08!11;UBERON:0002410!8.72e-08!9 | |ontology_enrichment_uberon=UBERON:0000010!3.66e-08!11;UBERON:0002410!8.72e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.21e-20,9;UBERON:0000010,1.40e-19,11;UBERON:0000055,2.15e-10,5;UBERON:0007500,2.15e-10,5;UBERON:0001981,2.15e-10,5;UBERON:0002049,2.15e-10,5;UBERON:0007798,2.15e-10,5;UBERON:0004537,2.15e-10,5;UBERON:0006965,2.15e-10,5;UBERON:0000947,7.50e-09,4;UBERON:0001637,7.50e-09,4;UBERON:0004573,7.50e-09,4;UBERON:0003509,7.50e-09,4;UBERON:0004571,7.50e-09,4;UBERON:0010191,7.50e-09,4;UBERON:0004572,7.50e-09,4;UBERON:0000011,5.47e-08,3;UBERON:0000013,6.38e-08,3;UBERON:0010313,1.17e-07,3;UBERON:0002342,1.17e-07,3;UBERON:0002005,1.17e-07,3;UBERON:0005428,1.17e-07,3;UBERON:0005062,1.17e-07,3;UBERON:0001135,4.62e-07,3;UBERON:0004237,4.62e-07,3;UBERON:0004695,4.62e-07,3;UBERON:0002111,4.62e-07,3;UBERON:0004178,4.62e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.92616169317078,2.20256102594018,0,0,0,1.55543919259427,0.419959264876088,0,0,0,0,0.771778308107841,1.43266719969378,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0.454357159999104,1.058001841495,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0,0.140444420131752,2.38602451609281,2.07828803682295,1.06001872353102,1.26759077799012,19.2489716121477,17.8363667794652,28.4426681261332,0,0,0,0,1.55362730188303,5.04703272820404,0.693941307064543,0.913396434936424,1.15307748628029,0.452167921657868,0.705532242814229,3.76999773989026,0,2.02439099687876,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.34224637609238,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,2.24046600470696,0.497627882440372,0.505445516867349,0.420883711772948,0,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,1.64625709126355,0,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.658239399653922,0.656669856316381,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.515469845288373,1.00841762311671,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0.913988100877831,0,0.814605311381257,0.193952487167626,0.49095073923223,0.885311519739602,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0.8858587585951,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0.551873492609465,0.481651769963376,0.468846746368813,1.14754461763673,0.757412781613119,5.67914794949262,6.63745865304285,7.75524231838076,11.4705023017225,9.58034298554295,7.92614286208731,10.1202675418724,7.89090816360542,9.48690667071656,0.321321316421807,1.41940085208269,0.712262414669021,1.62886959353576,1.97964147567043,0,0,0,0,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0.356737635204141,0,0.304464949114599,0.704015124191131,0.21183207086382,0.441056796109924,0.65954501176592,0.645857706783622,0.482503399425247,0.716234064018819,0.164140899745061,0.582961673259701,0.741701208042039,0,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.279902904647316,0.276399947608848,0,0.474503990371703,0.406638934253697,0.648032044930808,1.67270636811575,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,0.648074866458964,0,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.844780627453891,1.5256441023948,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0.403865799792591,0.15241361331,0.201652370273681,0.0974578807397524,0.384847366561318,0,1.13365191807606,0,0,0,2.12508553435409,0.563047426353546,1.09890974560359,0.643105137237198,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.384150914429216,0.516919220600519,0.476293691283074,0.231768651889711,0,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0.818462086339379,0.619747364743864,0.192906610981141,0,0,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.92616169317078,2.20256102594018,0,0,0,1.55543919259427,0.419959264876088,0,0,0,0,0.771778308107841,1.43266719969378,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0.454357159999104,1.058001841495,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0,0.140444420131752,2.38602451609281,2.07828803682295,1.06001872353102,1.26759077799012,19.2489716121477,17.8363667794652,28.4426681261332,0,0,0,0,1.55362730188303,5.04703272820404,0.693941307064543,0.913396434936424,1.15307748628029,0.452167921657868,0.705532242814229,3.76999773989026,0,2.02439099687876,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.34224637609238,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,2.24046600470696,0.497627882440372,0.505445516867349,0.420883711772948,0,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,1.64625709126355,0,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.658239399653922,0.656669856316381,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.515469845288373,1.00841762311671,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0.913988100877831,0,0.814605311381257,0.193952487167626,0.49095073923223,0.885311519739602,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0.8858587585951,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0.551873492609465,0.481651769963376,0.468846746368813,1.14754461763673,0.757412781613119,5.67914794949262,6.63745865304285,7.75524231838076,11.4705023017225,9.58034298554295,7.92614286208731,10.1202675418724,7.89090816360542,9.48690667071656,0.321321316421807,1.41940085208269,0.712262414669021,1.62886959353576,1.97964147567043,0,0,0,0,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0.356737635204141,0,0.304464949114599,0.704015124191131,0.21183207086382,0.441056796109924,0.65954501176592,0.645857706783622,0.482503399425247,0.716234064018819,0.164140899745061,0.582961673259701,0.741701208042039,0,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.279902904647316,0.276399947608848,0,0.474503990371703,0.406638934253697,0.648032044930808,1.67270636811575,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,0.648074866458964,0,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.844780627453891,1.5256441023948,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0.403865799792591,0.15241361331,0.201652370273681,0.0974578807397524,0.384847366561318,0,1.13365191807606,0,0,0,2.12508553435409,0.563047426353546,1.09890974560359,0.643105137237198,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.384150914429216,0.516919220600519,0.476293691283074,0.231768651889711,0,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0.818462086339379,0.619747364743864,0.192906610981141,0,0,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p2@Casp12 | |short_description=p2@Casp12 | ||
}} | }} |
Latest revision as of 20:22, 26 September 2015
Short description: | p2@Casp12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Casp12_5end |
Coexpression cluster: | MCL_coexpression_mm9:3424 |
Association with transcript: | -40bp_to_ENSMUST00000027009, ENSMUST00000151788, NM_009808, uc009obv.2, uc009obw.2, uc009obx.2, uc012gno.1, uc012gnp.1_5end |
EntrezGene: | Casp12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.21e-20 | 9 |
epithelial cell of thymus | 2.93e-08 | 3 |
embryonic cell | 5.11e-08 | 70 |
mesodermal cell | 3.48e-07 | 7 |
electrically responsive cell | 4.55e-07 | 39 |
electrically active cell | 4.55e-07 | 39 |
smooth muscle cell | 4.62e-07 | 3 |
vascular associated smooth muscle cell | 4.62e-07 | 3 |
aortic smooth muscle cell | 4.62e-07 | 3 |
smooth muscle myoblast | 4.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.21e-20 | 9 |
peripheral nervous system | 1.40e-19 | 11 |
vessel | 2.15e-10 | 5 |
epithelial tube open at both ends | 2.15e-10 | 5 |
blood vessel | 2.15e-10 | 5 |
vasculature | 2.15e-10 | 5 |
vascular system | 2.15e-10 | 5 |
blood vasculature | 2.15e-10 | 5 |
vascular cord | 2.15e-10 | 5 |
aorta | 7.50e-09 | 4 |
artery | 7.50e-09 | 4 |
systemic artery | 7.50e-09 | 4 |
arterial blood vessel | 7.50e-09 | 4 |
systemic arterial system | 7.50e-09 | 4 |
aortic system | 7.50e-09 | 4 |
arterial system | 7.50e-09 | 4 |
parasympathetic nervous system | 5.47e-08 | 3 |
sympathetic nervous system | 6.38e-08 | 3 |
neural crest-derived structure | 1.17e-07 | 3 |
neural crest | 1.17e-07 | 3 |
enteric nervous system | 1.17e-07 | 3 |
vagal neural crest | 1.17e-07 | 3 |
neural fold | 1.17e-07 | 3 |
smooth muscle tissue | 4.62e-07 | 3 |
blood vessel smooth muscle | 4.62e-07 | 3 |
arterial system smooth muscle | 4.62e-07 | 3 |
artery smooth muscle tissue | 4.62e-07 | 3 |
aorta smooth muscle tissue | 4.62e-07 | 3 |