FFCP PHASE1:Hg19::chr17:17723626..17723663,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6720 | |EntrezGene=6720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11289 | |HGNC=11289 | ||
|TSSclassifier=strong | |||
|UniProt=B5MD58 | |UniProt=B5MD58 | ||
|association_with_transcript=-361bp_to_ENST00000395757_5end | |association_with_transcript=-361bp_to_ENST00000395757_5end | ||
|cluster_id=chr17:17723626..17723663,- | |||
|description=CAGE_peak_4_at_SREBF1_5end | |description=CAGE_peak_4_at_SREBF1_5end | ||
|id=chr17:17723626..17723663,- | |id=chr17:17723626..17723663,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.89e-13!511;UBERON:0000468!3.89e-11!659;UBERON:0004119!3.69e-10!169;UBERON:0000925!3.69e-10!169;UBERON:0006595!3.69e-10!169;UBERON:0000923!5.20e-10!604;UBERON:0005291!5.20e-10!604;UBERON:0006598!5.20e-10!604;UBERON:0002532!5.20e-10!604;UBERON:0002050!5.54e-10!605;UBERON:0005423!5.54e-10!605;UBERON:0000922!1.88e-09!612;UBERON:0001007!2.69e-09!155;UBERON:0001555!2.69e-09!155;UBERON:0007026!2.69e-09!155;UBERON:0000480!3.91e-09!626;UBERON:0000467!4.97e-09!625;UBERON:0000475!1.23e-08!365;UBERON:0000481!1.80e-08!347;UBERON:0003102!1.50e-07!95;UBERON:0004921!4.88e-07!129;UBERON:0004185!4.88e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.27e-10,160;UBERON:0000925,7.27e-10,160;UBERON:0006595,7.27e-10,160;UBERON:0001007,6.44e-09,145;UBERON:0001555,6.44e-09,145;UBERON:0007026,6.44e-09,145;UBERON:0000923,1.62e-07,560;UBERON:0010316,1.62e-07,560;UBERON:0005291,1.62e-07,560;UBERON:0006598,1.62e-07,560;UBERON:0010317,1.62e-07,560;UBERON:0002532,1.62e-07,560;UBERON:0002050,5.53e-07,564;UBERON:0004921,6.06e-07,118 | |||
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| ||
|short_description=p4@SREBF1 | |short_description=p4@SREBF1 | ||
}} | }} |
Latest revision as of 22:15, 18 September 2015
Short description: | p4@SREBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SREBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -361bp_to_ENST00000395757_5end |
EntrezGene: | SREBF1 |
HGNC: | 11289 |
UniProt: | B5MD58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.27e-10 | 160 |
endoderm | 7.27e-10 | 160 |
presumptive endoderm | 7.27e-10 | 160 |
digestive system | 6.44e-09 | 145 |
digestive tract | 6.44e-09 | 145 |
primitive gut | 6.44e-09 | 145 |
germ layer | 1.62e-07 | 560 |
germ layer / neural crest | 1.62e-07 | 560 |
embryonic tissue | 1.62e-07 | 560 |
presumptive structure | 1.62e-07 | 560 |
germ layer / neural crest derived structure | 1.62e-07 | 560 |
epiblast (generic) | 1.62e-07 | 560 |
embryonic structure | 5.53e-07 | 564 |
subdivision of digestive tract | 6.06e-07 | 118 |