FFCP PHASE1:Hg19::chr17:15165825..15165851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5376 | |EntrezGene=5376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9118 | |HGNC=9118 | ||
|TSSclassifier=strong | |||
|UniProt=A8MU75 | |UniProt=A8MU75 | ||
|association_with_transcript=6bp_to_ENST00000395936_5end | |association_with_transcript=6bp_to_ENST00000395936_5end | ||
|cluster_id=chr17:15165825..15165851,- | |||
|description=CAGE_peak_2_at_PMP22_5end | |description=CAGE_peak_2_at_PMP22_5end | ||
|id=chr17:15165825..15165851,- | |id=chr17:15165825..15165851,- | ||
|ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000057!9.48e-12!75;CL:0000327!1.00e-07!14;CL:0000136!2.48e-07!15;CL:0002620!7.04e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000057!9.48e-12!75;CL:0000327!1.00e-07!14;CL:0000136!2.48e-07!15;CL:0002620!7.04e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000327;2.88e-07;15!CL:0002620;5.46e-07;23!CL:0000136;6.15e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.97e-12,76;CL:0000136,1.91e-07,15;CL:0000327,3.05e-07,15;CL:0002620,5.52e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.66e-19!659;UBERON:0000467!1.96e-15!625;UBERON:0000480!4.00e-15!626;UBERON:0007023!6.18e-15!115;UBERON:0000062!3.28e-13!511;UBERON:0000475!1.61e-12!365;UBERON:0005743!1.22e-11!86;UBERON:0001017!2.50e-11!82;UBERON:0000073!8.35e-11!94;UBERON:0001016!8.35e-11!94;UBERON:0000955!1.17e-10!69;UBERON:0006238!1.17e-10!69;UBERON:0001049!1.18e-10!57;UBERON:0005068!1.18e-10!57;UBERON:0006241!1.18e-10!57;UBERON:0007135!1.18e-10!57;UBERON:0002616!1.36e-10!59;UBERON:0000477!7.28e-10!286;UBERON:0003075!8.10e-10!86;UBERON:0007284!8.10e-10!86;UBERON:0002050!2.22e-09!605;UBERON:0005423!2.22e-09!605;UBERON:0000922!2.27e-09!612;UBERON:0000923!3.94e-09!604;UBERON:0005291!3.94e-09!604;UBERON:0006598!3.94e-09!604;UBERON:0002532!3.94e-09!604;UBERON:0002346!3.13e-08!90;UBERON:0000119!4.29e-08!312;UBERON:0000033!6.82e-08!123;UBERON:0003080!1.21e-07!42;UBERON:0000153!1.53e-07!129;UBERON:0007811!1.53e-07!129;UBERON:0002780!1.98e-07!41;UBERON:0001890!1.98e-07!41;UBERON:0006240!1.98e-07!41;UBERON:0000483!2.27e-07!309;UBERON:0001893!4.37e-07!34;UBERON:0000481!4.96e-07!347;UBERON:0000479!6.56e-07!787;UBERON:0002791!7.56e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.81e-15,114;UBERON:0010314,1.45e-12,132;UBERON:0001017,5.78e-11,81;UBERON:0003075,9.75e-11,82;UBERON:0007284,9.75e-11,82;UBERON:0001049,1.31e-10,56;UBERON:0005068,1.31e-10,56;UBERON:0006241,1.31e-10,56;UBERON:0007135,1.31e-10,56;UBERON:0000955,1.76e-10,68;UBERON:0006238,1.76e-10,68;UBERON:0001016,2.84e-10,89;UBERON:0000073,1.60e-09,53;UBERON:0002616,1.60e-09,53;UBERON:0002346,4.02e-09,86;UBERON:0000119,1.75e-08,309;UBERON:0000479,4.00e-08,773;UBERON:0000483,9.89e-08,306;UBERON:0000923,1.11e-07,560;UBERON:0010316,1.11e-07,560;UBERON:0005291,1.11e-07,560;UBERON:0006598,1.11e-07,560;UBERON:0010317,1.11e-07,560;UBERON:0002532,1.11e-07,560;UBERON:0002780,1.51e-07,41;UBERON:0001890,1.51e-07,41;UBERON:0003080,1.51e-07,41;UBERON:0006240,1.51e-07,41;UBERON:0002050,1.98e-07,564;UBERON:0001893,3.39e-07,34;UBERON:0010371,3.53e-07,104;UBERON:0011216,7.16e-07,223;UBERON:0003528,8.42e-07,34;UBERON:0002020,8.42e-07,34 | |||
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| ||
|short_description=p2@PMP22 | |short_description=p2@PMP22 | ||
}} | }} |
Latest revision as of 18:18, 18 September 2015
Short description: | p2@PMP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PMP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000395936_5end |
EntrezGene: | PMP22 |
HGNC: | 9118 |
UniProt: | A8MU75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.97e-12 | 76 |
fat cell | 1.91e-07 | 15 |
extracellular matrix secreting cell | 3.05e-07 | 15 |
skin fibroblast | 5.52e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.81e-15 | 114 |
structure with developmental contribution from neural crest | 1.45e-12 | 132 |
central nervous system | 5.78e-11 | 81 |
neural plate | 9.75e-11 | 82 |
presumptive neural plate | 9.75e-11 | 82 |
neural tube | 1.31e-10 | 56 |
neural rod | 1.31e-10 | 56 |
future spinal cord | 1.31e-10 | 56 |
neural keel | 1.31e-10 | 56 |
brain | 1.76e-10 | 68 |
future brain | 1.76e-10 | 68 |
nervous system | 2.84e-10 | 89 |
regional part of nervous system | 1.60e-09 | 53 |
regional part of brain | 1.60e-09 | 53 |
neurectoderm | 4.02e-09 | 86 |
cell layer | 1.75e-08 | 309 |
tissue | 4.00e-08 | 773 |
epithelium | 9.89e-08 | 306 |
germ layer | 1.11e-07 | 560 |
germ layer / neural crest | 1.11e-07 | 560 |
embryonic tissue | 1.11e-07 | 560 |
presumptive structure | 1.11e-07 | 560 |
germ layer / neural crest derived structure | 1.11e-07 | 560 |
epiblast (generic) | 1.11e-07 | 560 |
regional part of forebrain | 1.51e-07 | 41 |
forebrain | 1.51e-07 | 41 |
anterior neural tube | 1.51e-07 | 41 |
future forebrain | 1.51e-07 | 41 |
embryonic structure | 1.98e-07 | 564 |
telencephalon | 3.39e-07 | 34 |
ecto-epithelium | 3.53e-07 | 104 |
organ system subdivision | 7.16e-07 | 223 |
brain grey matter | 8.42e-07 | 34 |
gray matter | 8.42e-07 | 34 |