FFCP PHASE1:Mm9::chr9:44580992..44581032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76568 | |EntrezGene=76568 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB07,D3Z371 | |UniProt=Q9DB07,D3Z371 | ||
|association_with_transcript=0bp_to_ENSMUST00000002099,ENSMUST00000141005_5end | |association_with_transcript=0bp_to_ENSMUST00000002099,ENSMUST00000141005_5end | ||
|cluster_id=chr9:44580992..44581032,+ | |||
|description=CAGE_peak_3_at_Ift46_5end | |description=CAGE_peak_3_at_Ift46_5end | ||
|id=chr9:44580992..44581032,+ | |id=chr9:44580992..44581032,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.46e-18!43;CL:0000221!3.57e-18!44;CL:0000133!3.57e-18!44;CL:0000055!1.79e-16!50;CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000117!5.77e-15!23;CL:0000337!5.77e-15!23;CL:0000393!5.26e-14!39;CL:0000211!5.26e-14!39;CL:0002321!1.07e-09!70;CL:0000220!1.07e-09!70 | |ontology_enrichment_celltype=CL:0002319!2.46e-18!43;CL:0000221!3.57e-18!44;CL:0000133!3.57e-18!44;CL:0000055!1.79e-16!50;CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000117!5.77e-15!23;CL:0000337!5.77e-15!23;CL:0000393!5.26e-14!39;CL:0000211!5.26e-14!39;CL:0002321!1.07e-09!70;CL:0000220!1.07e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.41e-18,43;CL:0000221,3.49e-18,44;CL:0000133,3.49e-18,44;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0000117,5.67e-15,23;CL:0000337,5.67e-15,23;CL:0000393,5.17e-14,39;CL:0000211,5.17e-14,39;CL:0002321,9.68e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-31!75;UBERON:0001016!1.13e-31!75;UBERON:0001017!2.47e-31!73;UBERON:0005743!2.47e-31!73;UBERON:0004121!6.39e-25!102;UBERON:0000924!6.39e-25!102;UBERON:0006601!6.39e-25!102;UBERON:0001049!1.03e-23!52;UBERON:0005068!1.03e-23!52;UBERON:0006241!1.03e-23!52;UBERON:0007135!1.03e-23!52;UBERON:0002346!1.94e-23!71;UBERON:0003075!1.94e-23!71;UBERON:0007284!1.94e-23!71;UBERON:0000033!4.75e-23!63;UBERON:0000955!6.98e-23!50;UBERON:0006238!6.98e-23!50;UBERON:0002616!2.50e-22!49;UBERON:0003056!8.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0003080!2.93e-17!40;UBERON:0002780!1.28e-16!39;UBERON:0001890!1.28e-16!39;UBERON:0006240!1.28e-16!39;UBERON:0002791!3.11e-16!29;UBERON:0003528!3.11e-16!29;UBERON:0001893!3.11e-16!29;UBERON:0000153!6.39e-16!94;UBERON:0007811!6.01e-15!86;UBERON:0000956!1.93e-11!21;UBERON:0001869!1.93e-11!21;UBERON:0000203!1.93e-11!21;UBERON:0002619!3.59e-09!17;UBERON:0003076!4.27e-07!12;UBERON:0003057!4.27e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.13e-31!75;UBERON:0001016!1.13e-31!75;UBERON:0001017!2.47e-31!73;UBERON:0005743!2.47e-31!73;UBERON:0004121!6.39e-25!102;UBERON:0000924!6.39e-25!102;UBERON:0006601!6.39e-25!102;UBERON:0001049!1.03e-23!52;UBERON:0005068!1.03e-23!52;UBERON:0006241!1.03e-23!52;UBERON:0007135!1.03e-23!52;UBERON:0002346!1.94e-23!71;UBERON:0003075!1.94e-23!71;UBERON:0007284!1.94e-23!71;UBERON:0000033!4.75e-23!63;UBERON:0000955!6.98e-23!50;UBERON:0006238!6.98e-23!50;UBERON:0002616!2.50e-22!49;UBERON:0003056!8.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0003080!2.93e-17!40;UBERON:0002780!1.28e-16!39;UBERON:0001890!1.28e-16!39;UBERON:0006240!1.28e-16!39;UBERON:0002791!3.11e-16!29;UBERON:0003528!3.11e-16!29;UBERON:0001893!3.11e-16!29;UBERON:0000153!6.39e-16!94;UBERON:0007811!6.01e-15!86;UBERON:0000956!1.93e-11!21;UBERON:0001869!1.93e-11!21;UBERON:0000203!1.93e-11!21;UBERON:0002619!3.59e-09!17;UBERON:0003076!4.27e-07!12;UBERON:0003057!4.27e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.08e-31,75;UBERON:0001017,2.37e-31,73;UBERON:0004121,3.48e-28,95;UBERON:0000924,3.48e-28,95;UBERON:0006601,3.48e-28,95;UBERON:0002346,9.53e-28,64;UBERON:0003075,9.53e-28,64;UBERON:0007284,9.53e-28,64;UBERON:0000073,2.12e-25,54;UBERON:0001049,9.94e-24,52;UBERON:0005068,9.94e-24,52;UBERON:0006241,9.94e-24,52;UBERON:0007135,9.94e-24,52;UBERON:0010371,1.61e-23,73;UBERON:0000955,9.63e-21,47;UBERON:0006238,9.63e-21,47;UBERON:0002616,3.36e-20,46;UBERON:0003056,8.48e-20,49;UBERON:0002020,4.30e-19,34;UBERON:0003080,2.87e-17,40;UBERON:0010314,3.03e-17,92;UBERON:0002780,1.25e-16,39;UBERON:0001890,1.25e-16,39;UBERON:0006240,1.25e-16,39;UBERON:0003528,3.04e-16,29;UBERON:0002791,3.04e-16,29;UBERON:0001893,3.04e-16,29;UBERON:0000956,1.90e-11,21;UBERON:0001869,1.90e-11,21;UBERON:0000203,1.90e-11,21;UBERON:0002619,3.55e-09,17;UBERON:0003076,4.24e-07,12;UBERON:0003057,4.24e-07,12 | |||
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| ||
|short_description=p3@Ift46 | |short_description=p3@Ift46 | ||
}} | }} |
Latest revision as of 17:15, 26 September 2015
Short description: | p3@Ift46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ift46_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000002099, ENSMUST00000141005_5end |
EntrezGene: | Ift46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.41e-18 | 43 |
ectodermal cell | 3.49e-18 | 44 |
neurectodermal cell | 3.49e-18 | 44 |
neuron | 1.23e-15 | 33 |
neuronal stem cell | 1.23e-15 | 33 |
neuroblast | 1.23e-15 | 33 |
electrically signaling cell | 1.23e-15 | 33 |
CNS neuron (sensu Vertebrata) | 5.67e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.67e-15 | 23 |
electrically responsive cell | 5.17e-14 | 39 |
electrically active cell | 5.17e-14 | 39 |
embryonic cell | 9.68e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.08e-31 | 75 |
central nervous system | 2.37e-31 | 73 |
ectoderm-derived structure | 3.48e-28 | 95 |
ectoderm | 3.48e-28 | 95 |
presumptive ectoderm | 3.48e-28 | 95 |
neurectoderm | 9.53e-28 | 64 |
neural plate | 9.53e-28 | 64 |
presumptive neural plate | 9.53e-28 | 64 |
regional part of nervous system | 2.12e-25 | 54 |
neural tube | 9.94e-24 | 52 |
neural rod | 9.94e-24 | 52 |
future spinal cord | 9.94e-24 | 52 |
neural keel | 9.94e-24 | 52 |
ecto-epithelium | 1.61e-23 | 73 |
brain | 9.63e-21 | 47 |
future brain | 9.63e-21 | 47 |
regional part of brain | 3.36e-20 | 46 |
pre-chordal neural plate | 8.48e-20 | 49 |
gray matter | 4.30e-19 | 34 |
anterior neural tube | 2.87e-17 | 40 |
structure with developmental contribution from neural crest | 3.03e-17 | 92 |
regional part of forebrain | 1.25e-16 | 39 |
forebrain | 1.25e-16 | 39 |
future forebrain | 1.25e-16 | 39 |
brain grey matter | 3.04e-16 | 29 |
regional part of telencephalon | 3.04e-16 | 29 |
telencephalon | 3.04e-16 | 29 |
cerebral cortex | 1.90e-11 | 21 |
cerebral hemisphere | 1.90e-11 | 21 |
pallium | 1.90e-11 | 21 |
regional part of cerebral cortex | 3.55e-09 | 17 |
posterior neural tube | 4.24e-07 | 12 |
chordal neural plate | 4.24e-07 | 12 |