FFCP PHASE1:Hg19::chr17:1012729..1012756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=B3KW89,Q12979,Q6ZT60 | |UniProt=B3KW89,Q12979,Q6ZT60 | ||
|association_with_transcript=-405bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | |association_with_transcript=-405bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | ||
|cluster_id=chr17:1012729..1012756,- | |||
|description=CAGE_peak_8_at_ABR_5end | |description=CAGE_peak_8_at_ABR_5end | ||
|id=chr17:1012729..1012756,- | |id=chr17:1012729..1012756,- | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-07!42 | |ontology_enrichment_celltype=CL:0002057!2.66e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-07,42;CL:0002057,1.23e-07,42;CL:0000473,7.95e-07,48;CL:0000234,7.95e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.82e-14!625;UBERON:0000480!2.77e-14!626;UBERON:0000468!9.02e-14!659;UBERON:0002050!2.31e-10!605;UBERON:0005423!2.31e-10!605;UBERON:0000923!4.17e-10!604;UBERON:0005291!4.17e-10!604;UBERON:0006598!4.17e-10!604;UBERON:0002532!4.17e-10!604;UBERON:0003081!2.54e-09!216;UBERON:0000922!3.20e-09!612;UBERON:0000062!4.23e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,2.81e-09,581;UBERON:0000922,5.33e-09,592;UBERON:0000923,7.93e-09,560;UBERON:0010316,7.93e-09,560;UBERON:0005291,7.93e-09,560;UBERON:0006598,7.93e-09,560;UBERON:0010317,7.93e-09,560;UBERON:0002532,7.93e-09,560;UBERON:0002050,9.94e-09,564;UBERON:0003081,1.94e-08,203 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.83240725324762,1.0007329835313,0.446961094427288,0,0,0.631719873426831,1.04474251279935,0.982935746006035,0.697801167972428,3.27662058195258,3.69273769519835,1.36142988256051,1.32558950291166,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.738726348460727,1.02000345622126,1.88072832886853,2.0036519099174,2.18999080116615,1.38096903554283,0.0764134057479513,0,0.157421562627358,0.786728553697808,0,0.619264493264304,0,0.90361775633475,0,0,0,0.880801318004542,1.10799081706375,1.20326668482085,2.17010870715852,0.223915474239924,0,1.03030227053675,1.16318591023652,0.377875943688809,1.21292030593908,1.85943229524548,0.822335776043652,1.23882548358041,0.863077176966451,1.2808035326455,0.709446689665756,1.37898272294647,1.29096936716765,0,1.88242339542605,1.63743690034707,1.12361742222542,4.89734227793444,0.320929027076094,1.91801137739712,1.64925650093358,1.59570926097305,0.426224750532694,6.67481248845743,5.6738522469114,1.86846674698672,1.00499466102697,0.521482918420201,0.434377689410233,4.84319602106695,1.47311054395026,1.89877432464531,1.26753171787165,1.06302149982522,0.838634582033504,1.34794357375794,1.50176892841506,1.44653028027372,1.99508920618874,1.9891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,1.4203434172042,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.512365278902701,0.260118695119756,0.657751618414705,0,0,0.444859689486181,0,0,0.113309342697566,0.766440987203842,1.37450978193052,0,0.637130828648193,1.30216690771284,0,0.451725357233318,0.76791966692651,0,0.236777252044017,0.821127996921047,0.604820229674197,0.534880391567015,0.144824403882799,4.87613732627923,0.670700859703636,0.895037932904712,0.722878304769133,1.00267582127178,0.869079113764942,0,0.973269740605272,0.945348171640679,1.55210578223795,0.527008714158756,0.785874452986276,1.82147644146271,1.48313777113772,0.97364218096405,0.870648686496336,0.797747763113191,0,0,0,0.596287222100115,0,1.73570250803797,0,1.25849830862972,0,1.8809546988313,2.06733407335463,1.42306505074684,1.33888245105868,0,0.760272105718513,1.70843440283719,0.735326160691737,3.24056779152704,1.07159673940896,1.57170560838319,1.68917220724983,0,0.949265659568129,2.74802615895611,1.31780417436063,3.87780264148325,1.74437620857014,0.993943903390637,1.39293562831038,0.926864265692532,1.14734648299525,2.12801029319014,0.560677600142307,0,1.48000529050296,0.933633106199299,0.404132016209064,0.326923806226917,1.51357427644931,1.15235184896,0.937285727335186,0.936480230490962,2.85235910772225,1.94283284717341,0.822041490506354,0.161872944368132,0.561803226808994,1.63323337003915,2.7023549808589,1.13658359293342,1.18800285728205,1.23633464639278,0.910161361938026,2.15585442544872,0.841680569770331,1.00094815897571,0.277064115484183,1.31693286264251,0.919463387397059,1.50238058906597,0.340296549480063,0.179389635688862,0.85422955527427,2.33125091275518,0.900273288253207,0.618315175430633,1.28820270022815,0.930584281657949,1.35021065793013,0.974370051611986,0.504867548488229,0.828449087780694,0.80823028409406,1.06502877754984,0.906768884048762,1.18692414617341,0.57978255948989,0.545492241181669,1.43402297694502,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,2.76269842704961,1.39310378409594,0.721879481669586,0.118306800039844,0.505754070234305,0,0,0,0,0.134831308160164,0.392442930250692,0,2.21446636387394,1.40241773803446,1.2347220339942,2.94017422771084,0,0,0,0,0.245976877086227,0.343135620597051,1.97550513735526,0,1.00528972411631,1.574003567695,1.62904152655162,1.03993478527958,0,1.507095264676,0.939269553886573,0.866198686566443,0.925971025153221,0.570762456703795,0,0.858486162094873,0.492434012174795,1.17002132569619,2.37809859661965,0,0.335964256397719,0.992425680696705,0.716468181622786,0.290633938513962,2.68367875415648,0,0.352193736052904,0.207328115540772,0.576479813667846,1.00993946741104,0.126995788584338,1.14596527667483,0,3.4214489204541,1.23392991243988,0.600686115687835,0.857479297891735,1.00917975910825,0.43596006883328,0.7333828582095,0.517086863031111,3.57656445851882,0,0.26593811658487,1.04007436911366,0.771622122786426,0,1.3321108950805,1.85871391755592,1.62786481617433,0.823240336780769,0.977208552881205,1.42156779497018,0.791951872933429,3.01439377059586,0,1.29964888536674,0,0.502257091432126,0,0.958499421966331,1.14861935834114,1.42636905040718,0.289562613335158,1.84928690295345,0.716243852959582,0.336255431980582,0.985153801009636,0.431255149719035,0.513372145118994,1.01637849688985,1.30139853857622,0,1.00509759200609,0,9.73709131131337,0,2.07207756718018,1.47229790062968,0.500170521059677,0.542530047399471,1.03985430765404,0.178428988797162,0.630809660135739,0.468565659970853,2.40756879782175,0,0,1.32845119707087,1.29058417979192,0.955719759148911,0.979005787313703,1.02943027143257,0.413536052245775,0.6471426024558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| ||
|short_description=p8@ABR | |short_description=p8@ABR | ||
}} | }} |
Latest revision as of 14:08, 18 September 2015
Short description: | p8@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | -405bp_to_ENST00000291107, NM_001092, uc002fsg.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B3KW89Q12979Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-07 | 42 |
defensive cell | 7.95e-07 | 48 |
phagocyte | 7.95e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 2.81e-09 | 581 |
embryo | 5.33e-09 | 592 |
germ layer | 7.93e-09 | 560 |
germ layer / neural crest | 7.93e-09 | 560 |
embryonic tissue | 7.93e-09 | 560 |
presumptive structure | 7.93e-09 | 560 |
germ layer / neural crest derived structure | 7.93e-09 | 560 |
epiblast (generic) | 7.93e-09 | 560 |
embryonic structure | 9.94e-09 | 564 |
lateral plate mesoderm | 1.94e-08 | 203 |