FFCP PHASE1:Hg19::chr17:1007466..1007477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1007466..1007477,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr17:1007466..1007477,- | |description=CAGE_peak_at_chr17:1007466..1007477,- | ||
|id=chr17:1007466..1007477,- | |id=chr17:1007466..1007477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.06e-26;1!UBERON:0000358;8.64e-26;1!UBERON:0010226;8.64e-26;1!UBERON:0005062;1.26e-25;4!UBERON:0007284;1.26e-25;4 | |||
|ontology_enrichment_disease=DOID:114!7.15e-24!2;DOID:178!8.85e-13!1;DOID:326!8.85e-13!1;DOID:3978!8.85e-13!1;DOID:3394!8.85e-13!1;DOID:5844!8.85e-13!1;DOID:1287!1.97e-12!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.29e-50;2!DOID:178;4.06e-26;1!DOID:326;4.06e-26;1!DOID:3978;4.06e-26;1!DOID:3394;4.06e-26;1!DOID:5844;4.06e-26;1!DOID:1287;6.32e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.14e-50,2;DOID:178,3.58e-26,1;DOID:326,3.58e-26,1;DOID:3978,3.58e-26,1;DOID:3394,3.58e-26,1;DOID:5844,3.58e-26,1;DOID:1287,5.94e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.59e-26!27;UBERON:0003978!4.63e-16!3;UBERON:0009751!4.63e-16!3;UBERON:0000946!4.63e-16!3;UBERON:0002523!4.63e-16!3;UBERON:0005983!4.63e-16!3;UBERON:0002165!4.63e-16!3;UBERON:0002062!4.63e-16!3;UBERON:0007280!4.63e-16!3;UBERON:0004151!7.83e-16!3;UBERON:0003103!6.07e-15!69;UBERON:0002146!7.89e-13!1;UBERON:0005623!7.89e-13!1;UBERON:0002084!1.40e-12!1;UBERON:0002082!1.40e-12!1;UBERON:0004706!1.40e-12!1;UBERON:0002135!1.57e-12!1;UBERON:0007029!1.75e-12!1;UBERON:0002079!1.96e-12!1;UBERON:0000998!2.20e-12!1;UBERON:0006868!2.20e-12!1;UBERON:0007023!3.43e-12!115;UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0000948!1.19e-11!24;UBERON:0005498!1.19e-11!24;UBERON:0004140!1.19e-11!24;UBERON:0009881!1.19e-11!24;UBERON:0004141!1.19e-11!24;UBERON:0003084!1.19e-11!24;UBERON:0007005!1.19e-11!24;UBERON:0004139!1.19e-11!24;UBERON:0004291!1.19e-11!24;UBERON:0001009!1.41e-08!113;UBERON:0002133!6.80e-07!2;UBERON:0002081!7.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.77e-48;25!UBERON:0003978;9.10e-34;3!UBERON:0000946;9.10e-34;3!UBERON:0002146;2.78e-26;1!UBERON:0005623;2.78e-26;1!UBERON:0002084;8.64e-26;1!UBERON:0002082;8.64e-26;1!UBERON:0002135;1.26e-25;1!UBERON:0000948;2.09e-18;22!UBERON:0002133;1.55e-13;2!UBERON:0010313;6.94e-11;10!UBERON:0003103;1.41e-09;61!UBERON:0004151;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.02e-44,27;UBERON:0003978,9.10e-34,3;UBERON:0009751,9.10e-34,3;UBERON:0000946,9.10e-34,3;UBERON:0002523,9.10e-34,3;UBERON:0005983,9.10e-34,3;UBERON:0002165,9.10e-34,3;UBERON:0002062,9.10e-34,3;UBERON:0007280,9.10e-34,3;UBERON:0002146,2.78e-26,1;UBERON:0005623,2.78e-26,1;UBERON:0002084,9.79e-26,1;UBERON:0002082,9.79e-26,1;UBERON:0010226,9.79e-26,1;UBERON:0002135,1.26e-25,1;UBERON:0003103,7.05e-18,68;UBERON:0000948,6.70e-17,24;UBERON:0005498,6.70e-17,24;UBERON:0004140,6.70e-17,24;UBERON:0009881,6.70e-17,24;UBERON:0004141,6.70e-17,24;UBERON:0003084,6.70e-17,24;UBERON:0007005,6.70e-17,24;UBERON:0004139,6.70e-17,24;UBERON:0004291,6.70e-17,24;UBERON:0004797,4.07e-15,7;UBERON:0002133,1.55e-13,2;UBERON:0010313,6.94e-11,10;UBERON:0002342,6.94e-11,10;UBERON:0005062,6.94e-11,10;UBERON:0001009,7.18e-11,112;UBERON:0004151,1.67e-09,3;UBERON:0007023,6.40e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,12.6038233206426,0,6.98876501746469,18.027494021736,5.13294352116307,6.9198976661328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,12.6038233206426,0,6.98876501746469,18.027494021736,5.13294352116307,6.9198976661328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p@chr17:1007466..1007477,- | |short_description=p@chr17:1007466..1007477,- | ||
}} | }} |
Latest revision as of 13:38, 25 July 2015
Short description: | p@chr17:1007466..1007477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1007466..1007477, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.02e-44 | 27 |
valve | 9.10e-34 | 3 |
cardiac mesenchyme | 9.10e-34 | 3 |
cardial valve | 9.10e-34 | 3 |
tunica intima | 9.10e-34 | 3 |
heart layer | 9.10e-34 | 3 |
endocardium | 9.10e-34 | 3 |
endocardial cushion | 9.10e-34 | 3 |
presumptive endocardium | 9.10e-34 | 3 |
pulmonary valve | 2.78e-26 | 1 |
semi-lunar valve | 2.78e-26 | 1 |
heart left ventricle | 9.79e-26 | 1 |
cardiac ventricle | 9.79e-26 | 1 |
future cardiac ventricle | 9.79e-26 | 1 |
mitral valve | 1.26e-25 | 1 |
compound organ | 7.05e-18 | 68 |
heart | 6.70e-17 | 24 |
primitive heart tube | 6.70e-17 | 24 |
primary heart field | 6.70e-17 | 24 |
anterior lateral plate mesoderm | 6.70e-17 | 24 |
heart tube | 6.70e-17 | 24 |
heart primordium | 6.70e-17 | 24 |
cardiac mesoderm | 6.70e-17 | 24 |
cardiogenic plate | 6.70e-17 | 24 |
heart rudiment | 6.70e-17 | 24 |
blood vessel layer | 4.07e-15 | 7 |
atrioventricular valve | 1.55e-13 | 2 |
neural crest-derived structure | 6.94e-11 | 10 |
neural crest | 6.94e-11 | 10 |
neural fold | 6.94e-11 | 10 |
circulatory system | 7.18e-11 | 112 |
cardiac chamber | 1.67e-09 | 3 |
adult organism | 6.40e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.14e-50 | 2 |
vascular disease | 3.58e-26 | 1 |
ischemia | 3.58e-26 | 1 |
extrinsic cardiomyopathy | 3.58e-26 | 1 |
myocardial ischemia | 3.58e-26 | 1 |
myocardial infarction | 3.58e-26 | 1 |
cardiovascular system disease | 5.94e-26 | 4 |