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FFCP PHASE1:Mm9::chr9:36954842..36954908,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=208076
|EntrezGene=208076
|HGNC=
|HGNC=
|MCL_coexpression_id=817
|TSSclassifier=NA
|UniProt=Q8BG99,Q8BJF5
|UniProt=Q8BG99,Q8BJF5
|association_with_transcript=0bp_to_ENSMUST00000039674,ENSMUST00000080754,NM_001029838,NM_148950,uc009oue.1,uc009ouf.1,uc009oug.1,uc009ouh.1_5end
|association_with_transcript=0bp_to_ENSMUST00000039674,ENSMUST00000080754,NM_001029838,NM_148950,uc009oue.1,uc009ouf.1,uc009oug.1,uc009ouh.1_5end
|cluster_id=chr9:36954842..36954908,-
|description=CAGE_peak_1_at_Pknox2_5end
|description=CAGE_peak_1_at_Pknox2_5end
|id=chr9:36954842..36954908,-
|id=chr9:36954842..36954908,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0000033!4.30e-16!63;UBERON:0002346!5.33e-16!71;UBERON:0003075!5.33e-16!71;UBERON:0007284!5.33e-16!71;UBERON:0001017!5.49e-16!73;UBERON:0005743!5.49e-16!73;UBERON:0000073!6.24e-15!75;UBERON:0001016!6.24e-15!75;UBERON:0000955!6.86e-15!50;UBERON:0006238!6.86e-15!50;UBERON:0003056!7.54e-15!49;UBERON:0002616!2.28e-14!49;UBERON:0003080!1.16e-13!40;UBERON:0002780!2.82e-13!39;UBERON:0001890!2.82e-13!39;UBERON:0006240!2.82e-13!39;UBERON:0004121!2.62e-12!102;UBERON:0000924!2.62e-12!102;UBERON:0006601!2.62e-12!102;UBERON:0002020!4.52e-12!34;UBERON:0004111!3.45e-11!122;UBERON:0000025!1.78e-10!114;UBERON:0000468!6.25e-10!333;UBERON:0002791!1.04e-09!29;UBERON:0003528!1.04e-09!29;UBERON:0001893!1.04e-09!29;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0000956!4.52e-08!21;UBERON:0001869!4.52e-08!21;UBERON:0000203!4.52e-08!21;UBERON:0002619!6.03e-08!17;UBERON:0000922!3.55e-07!328
|ontology_enrichment_uberon=UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0000033!4.30e-16!63;UBERON:0002346!5.33e-16!71;UBERON:0003075!5.33e-16!71;UBERON:0007284!5.33e-16!71;UBERON:0001017!5.49e-16!73;UBERON:0005743!5.49e-16!73;UBERON:0000073!6.24e-15!75;UBERON:0001016!6.24e-15!75;UBERON:0000955!6.86e-15!50;UBERON:0006238!6.86e-15!50;UBERON:0003056!7.54e-15!49;UBERON:0002616!2.28e-14!49;UBERON:0003080!1.16e-13!40;UBERON:0002780!2.82e-13!39;UBERON:0001890!2.82e-13!39;UBERON:0006240!2.82e-13!39;UBERON:0004121!2.62e-12!102;UBERON:0000924!2.62e-12!102;UBERON:0006601!2.62e-12!102;UBERON:0002020!4.52e-12!34;UBERON:0004111!3.45e-11!122;UBERON:0000025!1.78e-10!114;UBERON:0000468!6.25e-10!333;UBERON:0002791!1.04e-09!29;UBERON:0003528!1.04e-09!29;UBERON:0001893!1.04e-09!29;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0000956!4.52e-08!21;UBERON:0001869!4.52e-08!21;UBERON:0000203!4.52e-08!21;UBERON:0002619!6.03e-08!17;UBERON:0000922!3.55e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-18,64;UBERON:0003075,1.04e-18,64;UBERON:0007284,1.04e-18,64;UBERON:0001049,1.38e-17,52;UBERON:0005068,1.38e-17,52;UBERON:0006241,1.38e-17,52;UBERON:0007135,1.38e-17,52;UBERON:0000073,6.29e-17,54;UBERON:0001017,4.75e-16,73;UBERON:0010371,2.17e-15,73;UBERON:0000955,3.10e-15,47;UBERON:0006238,3.10e-15,47;UBERON:0001016,5.45e-15,75;UBERON:0003056,6.60e-15,49;UBERON:0010314,8.21e-15,92;UBERON:0002616,1.05e-14,46;UBERON:0004121,6.51e-14,95;UBERON:0000924,6.51e-14,95;UBERON:0006601,6.51e-14,95;UBERON:0003080,1.03e-13,40;UBERON:0002780,2.51e-13,39;UBERON:0001890,2.51e-13,39;UBERON:0006240,2.51e-13,39;UBERON:0002020,4.07e-12,34;UBERON:0004111,4.29e-11,122;UBERON:0000025,2.21e-10,114;UBERON:0003528,9.54e-10,29;UBERON:0002791,9.54e-10,29;UBERON:0001893,9.54e-10,29;UBERON:0002021,3.28e-08,10;UBERON:0000411,3.28e-08,10;UBERON:0001950,3.28e-08,10;UBERON:0000956,4.23e-08,21;UBERON:0001869,4.23e-08,21;UBERON:0000203,4.23e-08,21;UBERON:0002619,5.65e-08,17;UBERON:0000922,4.08e-07,320
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23941889,60.2460746198294,45.604754442549,15.2201549146137,12.0377304968487,75.1119950680698,67.2074845300478,89.9445956099853,59.6330542732596,68.5082519770642,71.0070263546318,71.5523850245714,79.706852970687,68.8776461655991,75.5930055157657,21.3801936023404,24.7395421508639,21.1709671135126,16.2881500435757,15.3017608718427,13.420576116851,20.4466989577486,20.6035057238894,17.329637317958,23.2481434822694,15.2087579934144,21.6920292593988,17.0427543595186,19.2715708738657,17.8049953762401,26.6724467118521,19.3526824327909,19.6767404872979,21.0163809409686,22.963031540966,16.8005933668854,20.0547660960051,19.7902037656276,16.7148379127178,18.8218760830661,16.9229215783353,16.6464455314223,19.9932980692761,16.5681018891951,21.8845485946518,20.1679530811096,16.1547351095924,17.187703813127,18.5924209423159,16.2041553224159,21.9833308585392,13.8019648982791,15.4707158914775,16.6420848899894,13.2354851471709,21.5637087126992
|phase1_expression=17.2960754873177,0,0,0,0,0,0.233612640595526,0.258246646883153,0.985521055061667,1.17032263160997,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,0,0,0,0,21.4309091180696,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,4.60384793810598,2.3440060335714,5.23523743973798,3.52938892818609,3.41522742479223,5.34061388334269,8.18329316841252,11.6583470902442,28.816840089384,17.9950009200049,7.19483016055474,5.93152693383074,7.19390626574849,8.9591309840232,10.062679505548,0,0,0.672187598284928,15.6928255981928,28.0802771139982,11.8604581223812,26.9080892943265,17.4567023159771,17.1134478946668,10.8430250262122,10.6715375533337,0,0,0,10.1864037576258,14.2160772968975,12.6501327016343,13.9056116481641,12.6194976810829,23.7090317055157,28.7129103237098,18.618601480673,20.8943126819755,18.3843757322004,7.70811166995721,13.2794831608595,17.664751324468,24.3989632300859,24.1527379110361,22.9201883044974,9.77140496504833,17.4456409109821,19.0997809721013,35.6500588423138,39.8640706237488,45.6678642271986,1.74170244666323,3.09843396437821,17.971598299504,0.860423876981386,0,0,0,0.448026887097336,11.5164424508037,0.170430322578058,0.259786004602869,0,5.49289337129054,2.56652954828636,7.64415719119937,0,0,0.253359865475099,0,4.68153906848146,13.9826457169473,4.60170631100957,8.50078101154066,6.39377504455497,5.30415643688935,6.48107354376277,9.05433044944927,2.63899841792318,4.44950941921873,9.39895819979426,3.5384422077995,16.8237523945306,12.367125033782,10.6672555689749,1.86391761218122,42.7459963636859,25.761944938055,3.0654846625031,0,0,0,25.1648274200102,26.5350349634803,21.6125485634127,64.3149984711423,54.7231078686907,19.5320761885986,30.6635987198062,24.2377685963753,8.33526703087623,2.77995034277042,11.1534183619831,27.0650521362424,11.9549094305406,18.1862751103403,21.2493793148358,22.7922272156948,21.0106501267154,17.9907311154679,12.6764651662118,26.5148631307396,23.4491539408096,15.1317966780996,7.01426343768239,11.9560317167007,17.7608604926305,9.05441400194951,27.0686602873151,0,0,0.284163499395593,10.9776659443816,9.38104239924385,10.6236616261999,11.3637473080901,8.65762619688577,6.78775296704464,7.20855228726264,6.70683503499048,6.30532848782715,9.37991144506839,13.1333971263276,9.64718833595683,10.3801991071986,13.6121071480451,10.3338942445486,31.1229123874908,26.755199218614,0.660837565967596,2.64450566663544,26.2344548158338,23.9203772016252,12.371276286921,11.0925938542838,10.0070119730192,7.03834816616469,1.42358718463353,6.58795818896044,6.53471542880701,5.17286827306992,6.04388670069272,0.898819408654221,4.75503709724327,3.38540164532424,9.67306294860717,14.1668155636064,18.0332377076929,15.4775009162439,13.3827216145662,11.8529535614638,16.6944458008039,9.15182917473533,3.92496819603437,4.31890073726302,2.07516838961004,3.83743743147016,2.55526693647164,1.12431056192427,1.21716072833102,0.72353147925725,1.2731292589071,2.87696137450811,1.45921704097532,2.47105271869273,7.18841032636773,4.46569137202204,3.74445207737473,1.51547326768267,1.07638448113147,2.8946611281802,25.6806934331581,8.33762211790133,14.6668478797823,16.8047634917436,20.8874320976767,22.2783322397615,19.9956658344252,39.4169968672754,35.7831777121054,29.4548037232871,33.3260466494148,44.7346849173965,33.8462564457155,42.8161213401274,0,0,2.45882136509518,4.96686143348518,21.0321272884007,15.9407893765396,1.47541450839008,28.5292147740941,10.4117712407365,8.58965237452605,20.0343759891503,9.08081432219698,5.56996685205985,7.64306633129848,7.69140333182299,5.55286130031493,7.90575555893047,36.9519513885078,44.7111268406046,22.4362660620742,18.2433394476005,62.6886467295635,2.65490276679926,7.76898035695941,5.13950046840077,2.82907619633847,4.42952839321159,7.37844355065426,7.23599220871019,5.08947221268508,6.06045543254026,6.0046984007805,5.27093042874994,3.09406629744561,20.7668159509811,31.5106914554793,29.7524972700335,45.225114391666,42.7389963077879,27.2904290931168,22.7077648430927,13.700922710157,38.4861601224485,9.74427525973573,26.4634077665954,15.4993077764991,4.35953952078945,5.06628569396509,2.02932984805332,3.11867709515616,4.37221254944776,22.8073121472927,3.2465467351592,15.8917888331681,11.2968661695524,3.01389531207506,1.77702496037333,1.83022538565218,0,0,0,3.81868247206045,16.7658076598002,17.6887936400358,17.6048705539536,17.3543285692009,14.4119292072477,11.5983337890946,11.2408699786457,4.97336289769656,5.05498395837992,6.21339313086926,1.69107881605257,54.2745062139643,42.6882905379312,63.0021850234714,57.7344410945458,56.4313459139199,59.3827627547515,31.249052362548,19.8184160964594,7.00593950395418,5.76060012515731,2.21207784439725,8.31173382689673,5.23825881540619,2.46849563657811,4.833720783022,2.58285761215644,1.80293174279953,2.36303243479324,2.42319479875554,1.295515713135,0.907435666231565,1.46186821109629,0.962118416403295,1.75315353272353,31.7422537061296,0.221985953374065,0,0.335769232728157,13.1368923941889,60.2460746198294,45.604754442549,15.2201549146137,12.0377304968487,75.1119950680698,67.2074845300478,89.9445956099853,59.6330542732596,68.5082519770642,71.0070263546318,71.5523850245714,79.706852970687,68.8776461655991,75.5930055157657,21.3801936023404,24.7395421508639,21.1709671135126,16.2881500435757,15.3017608718427,13.420576116851,20.4466989577486,20.6035057238894,17.329637317958,23.2481434822694,15.2087579934144,21.6920292593988,17.0427543595186,19.2715708738657,17.8049953762401,26.6724467118521,19.3526824327909,19.6767404872979,21.0163809409686,22.963031540966,16.8005933668854,20.0547660960051,19.7902037656276,16.7148379127178,18.8218760830661,16.9229215783353,16.6464455314223,19.9932980692761,16.5681018891951,21.8845485946518,20.1679530811096,16.1547351095924,17.187703813127,18.5924209423159,16.2041553224159,21.9833308585392,13.8019648982791,15.4707158914775,16.6420848899894,13.2354851471709,21.5637087126992
|short_description=p1@Pknox2
|short_description=p1@Pknox2
}}
}}

Latest revision as of 14:35, 26 September 2015

Short description:p1@Pknox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pknox2_5end
Coexpression cluster:MCL_coexpression_mm9:817
Association with transcript: 0bp_to_ENSMUST00000039674, ENSMUST00000080754, NM_001029838, NM_148950, uc009oue.1, uc009ouf.1, uc009oug.1, uc009ouh.1_5end
EntrezGene:Pknox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pknox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.82
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C326.91
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.67
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H913.98
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F516.82
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B242.75
cerebellum, neonate N30.CNhs11135.1395-42I225.76
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F121.61
cortex, adult.CNhs10473.12-14D564.31
cortex, neonate N30.CNhs11107.1392-42F254.72
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B230.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.34
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G411.15
eyeball, embryo E12.CNhs11016.345-16C627.07
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C918.19
eyeball, embryo E17.CNhs11023.1261-18D421.25
eyeball, neonate N00.CNhs11207.633-15C622.79
eyeball, neonate N01.CNhs11140.1532-43E721.01
eyeball, neonate N02.CNhs11205.1551-44G817.99
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E226.51
forelimb, embryo E12.CNhs10600.359-14H223.45
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I627.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E910.98
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I910.62
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E36.31
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G113.13
heart, neonate N16.CNhs11209.782-15G19.65
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D313.61
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E831.12
hippocampus, neonate N00.CNhs11228.627-43G126.76
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I526.23
intestine, embryo E13.CNhs11010.381-16D523.92
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I215.48
kidney, embryo E18.CNhs11001.1288-20C713.38
kidney, neonate N00.CNhs11214.646-21G711.85
kidney, neonate N10.CNhs11206.758-6D516.69
kidney, neonate N20.CNhs11113.832-19I19.15
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B125.68
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C516.80
lung, embryo E16.CNhs10998.458-17B620.89
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C639.42
lung, neonate N06.CNhs11212.683-20E535.78
lung, neonate N07.CNhs11111.715-19A329.45
lung, neonate N10.CNhs11219.750-23E633.33
lung, neonate N20.CNhs11109.822-18A444.73
lung, neonate N25.CNhs11119.1359-25C733.85
lung, neonate N30.CNhs11133.1394-42H242.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C221.03
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I936.95
ovary, adult.CNhs10507.91-2I744.71
ovary, embryo E18.CNhs11040.505-44H722.44
ovary, neonate N00.CNhs11217.1299-22I418.24
oviduct, adult pregnant day01.CNhs10500.988-6G662.69
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E631.51
pituitary gland, embryo E13.CNhs11009.370-44C729.75
pituitary gland, embryo E14.CNhs11037.398-44A545.23
pituitary gland, embryo E15.CNhs10592.427-16B942.74
pituitary gland, embryo E16.CNhs11036.449-43F627.29
pituitary gland, embryo E17.CNhs11039.1265-44F522.71
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I738.49
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F826.46
skin, adult.CNhs10492.30-1C315.50
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H35.07
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C922.81
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C115.89
spleen, embryo E18.CNhs11011.1271-21F211.30
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G817.69
stomach, embryo E16.CNhs11022.459-17D417.60
stomach, embryo E17.CNhs11006.1035-18D517.35
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A911.24
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F554.27
testis, embryo E15.CNhs11034.443-27C542.69
testis, embryo E16.CNhs11033.470-26G563.00
testis, embryo E17.CNhs11029.486-18I557.73
testis, embryo E18.CNhs11027.503-18G556.43
testis, neonate N00.CNhs11189.1300-22B759.38
testis, neonate N07.CNhs11222.726-26I431.25
testis, neonate N10.CNhs11204.763-44D919.82
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I25.24
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B431.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E413.14
uterus, adult pregnant day19.CNhs10497.590-15F560.25
uterus, adult.CNhs10509.92-27E545.60
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A267.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A389.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A468.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A571.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A671.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A779.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A868.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A975.59
whole body, embryo E11.CNhs11014.324-5I821.38
whole body, embryo E12.CNhs10587.857-27C924.74
whole body, embryo E13.CNhs10512.372-23H221.17
whole body, embryo E14.5.CNhs10578.420-27D216.29
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.59
whole body, embryo E17.5.CNhs10513.490-9F916.20
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C616.64
whole body, neonate N06.CNhs10515.692-21D113.24
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.04e-1864
neural plate1.04e-1864
presumptive neural plate1.04e-1864
neural tube1.38e-1752
neural rod1.38e-1752
future spinal cord1.38e-1752
neural keel1.38e-1752
regional part of nervous system6.29e-1754
central nervous system4.75e-1673
ecto-epithelium2.17e-1573
brain3.10e-1547
future brain3.10e-1547
nervous system5.45e-1575
pre-chordal neural plate6.60e-1549
structure with developmental contribution from neural crest8.21e-1592
regional part of brain1.05e-1446
ectoderm-derived structure6.51e-1495
ectoderm6.51e-1495
presumptive ectoderm6.51e-1495
anterior neural tube1.03e-1340
regional part of forebrain2.51e-1339
forebrain2.51e-1339
future forebrain2.51e-1339
gray matter4.07e-1234
anatomical conduit4.29e-11122
tube2.21e-10114
brain grey matter9.54e-1029
regional part of telencephalon9.54e-1029
telencephalon9.54e-1029
occipital lobe3.28e-0810
visual cortex3.28e-0810
neocortex3.28e-0810
cerebral cortex4.23e-0821
cerebral hemisphere4.23e-0821
pallium4.23e-0821
regional part of cerebral cortex5.65e-0817
embryo4.08e-07320
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