FFCP PHASE1:Hg19::chr16:89007491..89007514,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=91bp_to_ENST00000327483_5end | |association_with_transcript=91bp_to_ENST00000327483_5end | ||
|cluster_id=chr16:89007491..89007514,- | |||
|description=CAGE_peak_11_at_CBFA2T3_5end | |description=CAGE_peak_11_at_CBFA2T3_5end | ||
|id=chr16:89007491..89007514,- | |id=chr16:89007491..89007514,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;5.74e-17;3!CL:0000094;6.42e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.75e-17,3;CL:0000094,6.42e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.48e-36;3!UBERON:0010122;4.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.39e-12;4!DOID:1612;1.39e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.03e-12,4;DOID:1612,1.03e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-49!115;UBERON:0001049!4.25e-29!57;UBERON:0005068!4.25e-29!57;UBERON:0006241!4.25e-29!57;UBERON:0007135!4.25e-29!57;UBERON:0002616!1.08e-27!59;UBERON:0000955!3.71e-26!69;UBERON:0006238!3.71e-26!69;UBERON:0002780!1.88e-24!41;UBERON:0001890!1.88e-24!41;UBERON:0006240!1.88e-24!41;UBERON:0001017!8.48e-24!82;UBERON:0003075!1.13e-23!86;UBERON:0007284!1.13e-23!86;UBERON:0003080!1.19e-23!42;UBERON:0005743!1.96e-23!86;UBERON:0002020!3.40e-23!34;UBERON:0003528!3.40e-23!34;UBERON:0001869!3.51e-23!32;UBERON:0001893!5.18e-23!34;UBERON:0001950!5.81e-23!20;UBERON:0002619!1.08e-22!22;UBERON:0002346!5.44e-22!90;UBERON:0002791!7.71e-22!33;UBERON:0000073!6.50e-20!94;UBERON:0001016!6.50e-20!94;UBERON:0000956!2.63e-19!25;UBERON:0000203!2.63e-19!25;UBERON:0003056!5.05e-16!61;UBERON:0000153!1.18e-13!129;UBERON:0007811!1.18e-13!129;UBERON:0000033!2.18e-12!123;UBERON:0004121!1.03e-10!169;UBERON:0000924!3.82e-10!173;UBERON:0006601!3.82e-10!173;UBERON:0001871!5.78e-09!7;UBERON:0004733!5.87e-09!12;UBERON:0002028!5.87e-09!12;UBERON:0007277!5.87e-09!12;UBERON:0002021!2.61e-08!5;UBERON:0001872!3.53e-08!5;UBERON:0004732!4.18e-08!13;UBERON:0000025!6.54e-07!194;UBERON:0003076!9.47e-07!15;UBERON:0003057!9.47e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.58e-18;6!UBERON:0004733;4.41e-16;12!UBERON:0002028;4.41e-16;12!UBERON:0004732;7.24e-15;13!UBERON:0007029;5.70e-13;1!UBERON:0002135;5.70e-13;1!UBERON:0002680;1.48e-12;9!UBERON:0001895;1.48e-12;9!UBERON:0001905;4.04e-07;2!UBERON:0001873;4.04e-07;2!UBERON:0002757;4.04e-07;2!UBERON:0010134;4.04e-07;2!UBERON:0002133;4.04e-07;2!UBERON:0005408;4.04e-07;2!UBERON:0001899;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.84e-18,6;UBERON:0006215,1.84e-18,6;UBERON:0004733,5.58e-16,12;UBERON:0002028,5.58e-16,12;UBERON:0007277,5.58e-16,12;UBERON:0004732,8.98e-15,13;UBERON:0007029,2.95e-13,1;UBERON:0003076,7.71e-13,15;UBERON:0003057,7.71e-13,15;UBERON:0002135,9.73e-13,1;UBERON:0002680,1.63e-12,9;UBERON:0001895,1.63e-12,9;UBERON:0010092,1.63e-12,9;UBERON:0000073,5.10e-10,53;UBERON:0002616,5.10e-10,53;UBERON:0001049,1.85e-09,56;UBERON:0005068,1.85e-09,56;UBERON:0006241,1.85e-09,56;UBERON:0007135,1.85e-09,56;UBERON:0007023,5.65e-09,114;UBERON:0003075,3.84e-08,82;UBERON:0007284,3.84e-08,82;UBERON:0010371,6.14e-08,104;UBERON:0002346,9.99e-08,86;UBERON:0000955,1.39e-07,68;UBERON:0006238,1.39e-07,68;UBERON:0001873,3.48e-07,2;UBERON:0010122,3.48e-07,2;UBERON:0002133,5.28e-07,2;UBERON:0001905,5.60e-07,2;UBERON:0002757,5.60e-07,2;UBERON:0010134,5.60e-07,2;UBERON:0005408,5.60e-07,2;UBERON:0001899,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,2.27858874869665,0,0,1.29694662238543,0,0.79312517629427,0,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,1.30213880542617,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,1.32656082487949,3.05163472634166,5.41838373663001,1.18219047581419,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0.730755590285376,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,1.14681839138014,0.332787154610557,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,1.41696576325585,0.957803154342908,0.41023272848151,0.504143392443436,0.414943514785307,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.380494861163441,0.546974809018219,0,0,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,0.203909198930495,0.460409414939944,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.571812353413251,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0,0,0,0,0.301925687133347,0,0.437119121007915,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0.839655827868079,0.558672428662721,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0.805095174364105,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,2.27858874869665,0,0,1.29694662238543,0,0.79312517629427,0,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,1.30213880542617,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,1.32656082487949,3.05163472634166,5.41838373663001,1.18219047581419,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0.730755590285376,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,1.14681839138014,0.332787154610557,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,1.41696576325585,0.957803154342908,0.41023272848151,0.504143392443436,0.414943514785307,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.380494861163441,0.546974809018219,0,0,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,0.203909198930495,0.460409414939944,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.571812353413251,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0,0,0,0,0.301925687133347,0,0.437119121007915,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0.839655827868079,0.558672428662721,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0.805095174364105,0.320568492303233 | ||
|short_description=p11@CBFA2T3 | |short_description=p11@CBFA2T3 | ||
}} | }} |
Latest revision as of 10:36, 18 September 2015
Short description: | p11@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CBFA2T3_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000327483_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.75e-17 | 3 |
granulocyte | 6.42e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.84e-18 | 6 |
rhombic lip | 1.84e-18 | 6 |
segmental subdivision of hindbrain | 5.58e-16 | 12 |
hindbrain | 5.58e-16 | 12 |
presumptive hindbrain | 5.58e-16 | 12 |
segmental subdivision of nervous system | 8.98e-15 | 13 |
surface | 2.95e-13 | 1 |
posterior neural tube | 7.71e-13 | 15 |
chordal neural plate | 7.71e-13 | 15 |
mitral valve | 9.73e-13 | 1 |
regional part of metencephalon | 1.63e-12 | 9 |
metencephalon | 1.63e-12 | 9 |
future metencephalon | 1.63e-12 | 9 |
regional part of nervous system | 5.10e-10 | 53 |
regional part of brain | 5.10e-10 | 53 |
neural tube | 1.85e-09 | 56 |
neural rod | 1.85e-09 | 56 |
future spinal cord | 1.85e-09 | 56 |
neural keel | 1.85e-09 | 56 |
adult organism | 5.65e-09 | 114 |
neural plate | 3.84e-08 | 82 |
presumptive neural plate | 3.84e-08 | 82 |
ecto-epithelium | 6.14e-08 | 104 |
neurectoderm | 9.99e-08 | 86 |
brain | 1.39e-07 | 68 |
future brain | 1.39e-07 | 68 |
caudate nucleus | 3.48e-07 | 2 |
future caudate nucleus | 3.48e-07 | 2 |
atrioventricular valve | 5.28e-07 | 2 |
pineal body | 5.60e-07 | 2 |
regional part of epithalamus | 5.60e-07 | 2 |
secretory circumventricular organ | 5.60e-07 | 2 |
circumventricular organ | 5.60e-07 | 2 |
epithalamus | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.03e-12 | 4 |
breast cancer | 1.03e-12 | 4 |