FFCP PHASE1:Hg19::chr16:88518166..88518180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:88518166..88518180,+ | |||
|description=CAGE_peak_at_chr16:88518166..88518180,+ | |description=CAGE_peak_at_chr16:88518166..88518180,+ | ||
|id=chr16:88518166..88518180,+ | |id=chr16:88518166..88518180,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.05e-09;3!CL:0000149;1.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.10e-09,3;CL:0000149,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.14e-13;2!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!5.07e-08!27;UBERON:0003918!5.07e-08!27;UBERON:0005095!5.07e-08!27;UBERON:0007687!5.07e-08!27;UBERON:0005172!1.29e-07!55;UBERON:0005173!1.29e-07!55;UBERON:0000970!5.88e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;6.72e-26;1!UBERON:0000966;7.35e-21;5!UBERON:0005388;7.35e-21;5!UBERON:0001802;7.35e-21;5!UBERON:0001781;1.05e-09;3!UBERON:0001782;1.05e-09;3!UBERON:0006947;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0005904;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.93e-26,1;UBERON:0000966,1.22e-17,6;UBERON:0005388,1.22e-17,6;UBERON:0001802,1.22e-17,6;UBERON:0001782,1.10e-09,3;UBERON:0005424,1.10e-09,3;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0001781,1.40e-07,4;UBERON:0005904,1.69e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.229240217243854,0.492603536699674,0,0,0,0,0,0,0,0.92960640696362,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.443458794925128,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0.512900250232778,2.29610251989794,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.557409525377156,0,0,0,1.1974762285969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.390776190804081,2.78406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0.671286347903371,0.189753732724185,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,1.22308667769421,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,1.15063130943567,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,0.577000469484979,0,0,0,0,0,0.25426853765475,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0.169732529954025,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,1.07963795609311,0,1.85839014859306,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.196300467230486,0.609589624911347,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.580120991762195,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr16:88518166..88518180,+ | |short_description=p@chr16:88518166..88518180,+ | ||
}} | }} |
Latest revision as of 13:18, 25 July 2015
Short description: | p@chr16:88518166..88518180, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88518166..88518180, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.10e-09 | 3 |
visual pigment cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epididymis | 5.93e-26 | 1 |
retina | 1.22e-17 | 6 |
photoreceptor array | 1.22e-17 | 6 |
posterior segment of eyeball | 1.22e-17 | 6 |
pigmented layer of retina | 1.10e-09 | 3 |
presumptive retinal pigmented epithelium | 1.10e-09 | 3 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
layer of retina | 1.40e-07 | 4 |
duct of male reproductive system | 1.69e-07 | 4 |