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FFCP PHASE1:Hg19::chr11:85430088..85430151,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=54843
|EntrezGene=54843
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=15585
|HGNC=15585
|TSSclassifier=strong
|UniProt=E9PIB5,E9PQL8
|UniProt=E9PIB5,E9PQL8
|association_with_transcript=0bp_to_ENST00000530894,ENST00000532995,ENST00000533057,ENST00000533892_5end
|association_with_transcript=0bp_to_ENST00000530894,ENST00000532995,ENST00000533057,ENST00000533892_5end
|cluster_id=chr11:85430088..85430151,-
|coexpression_cluster_id=C3209
|description=CAGE_peak_2_at_SYTL2_5end
|description=CAGE_peak_2_at_SYTL2_5end
|id=chr11:85430088..85430151,-
|id=chr11:85430088..85430151,-
|ontology_enrichment_celltype=CL:0000055!2.74e-30!180;CL:0000680!1.01e-11!57;CL:0000056!1.01e-11!57;CL:0000355!1.01e-11!57;CL:0000393!5.22e-11!60;CL:0000211!5.22e-11!60;CL:0000187!8.36e-11!54;CL:0000057!3.13e-10!75;CL:0002620!4.31e-10!23;CL:0000183!7.07e-09!59;CL:0000192!1.64e-07!42;CL:0000514!1.64e-07!42;CL:0000359!5.21e-07!32
|ontology_enrichment_celltype=CL:0000055!2.74e-30!180;CL:0000680!1.01e-11!57;CL:0000056!1.01e-11!57;CL:0000355!1.01e-11!57;CL:0000393!5.22e-11!60;CL:0000211!5.22e-11!60;CL:0000187!8.36e-11!54;CL:0000057!3.13e-10!75;CL:0002620!4.31e-10!23;CL:0000183!7.07e-09!59;CL:0000192!1.64e-07!42;CL:0000514!1.64e-07!42;CL:0000359!5.21e-07!32
|ontology_enrichment_celltype_v019=CL:0002620;7.68e-10;23
|ontology_enrichment_celltype_v019_2=CL:0002620,9.92e-10,23;CL:0000680,3.53e-09,58;CL:0000056,3.53e-09,58;CL:0000355,3.53e-09,58;CL:0000393,2.02e-08,61;CL:0000211,2.02e-08,61;CL:0000187,3.27e-08,55;CL:0000057,2.13e-07,76
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:120!2.53e-07!27;DOID:193!3.74e-07!29
|ontology_enrichment_disease=DOID:120!2.53e-07!27;DOID:193!3.74e-07!29
|ontology_enrichment_disease_v019=DOID:120;4.90e-08;27!DOID:193;5.22e-07;29
|ontology_enrichment_disease_v019_2=DOID:120,3.98e-08,27;DOID:193,4.34e-07,29
|ontology_enrichment_uberon=UBERON:0000475!6.97e-25!365;UBERON:0005743!6.48e-18!86;UBERON:0000483!1.99e-17!309;UBERON:0001017!2.22e-17!82;UBERON:0000119!6.62e-17!312;UBERON:0000073!1.28e-16!94;UBERON:0001016!1.28e-16!94;UBERON:0001049!7.19e-16!57;UBERON:0005068!7.19e-16!57;UBERON:0006241!7.19e-16!57;UBERON:0007135!7.19e-16!57;UBERON:0003075!1.31e-14!86;UBERON:0007284!1.31e-14!86;UBERON:0002616!5.14e-14!59;UBERON:0000955!5.57e-14!69;UBERON:0006238!5.57e-14!69;UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0000481!2.44e-13!347;UBERON:0004290!2.57e-13!70;UBERON:0002346!8.24e-13!90;UBERON:0002385!1.24e-12!63;UBERON:0001015!1.24e-12!63;UBERON:0000383!1.24e-12!63;UBERON:0001134!1.93e-12!61;UBERON:0002036!1.93e-12!61;UBERON:0003082!1.93e-12!61;UBERON:0000025!2.72e-11!194;UBERON:0002020!2.87e-11!34;UBERON:0003528!2.87e-11!34;UBERON:0001893!3.10e-11!34;UBERON:0001869!9.15e-11!32;UBERON:0002791!9.61e-11!33;UBERON:0000486!1.04e-10!82;UBERON:0005256!1.13e-10!143;UBERON:0002780!1.16e-10!41;UBERON:0001890!1.16e-10!41;UBERON:0006240!1.16e-10!41;UBERON:0004121!1.48e-10!169;UBERON:0007023!3.74e-10!115;UBERON:0000033!3.88e-10!123;UBERON:0003080!4.54e-10!42;UBERON:0004111!7.62e-10!241;UBERON:0000477!8.20e-10!286;UBERON:0000153!1.36e-09!129;UBERON:0007811!1.36e-09!129;UBERON:0000468!1.36e-09!659;UBERON:0000924!1.43e-09!173;UBERON:0006601!1.43e-09!173;UBERON:0000467!2.15e-09!625;UBERON:0000480!3.09e-09!626;UBERON:0000956!8.93e-09!25;UBERON:0000203!8.93e-09!25;UBERON:0003056!1.47e-08!61;UBERON:0002100!5.27e-08!216;UBERON:0003076!1.68e-07!15;UBERON:0003057!1.68e-07!15;UBERON:0002097!3.29e-07!40;UBERON:0002619!4.05e-07!22;UBERON:0002199!4.14e-07!45;UBERON:0002416!4.14e-07!45
|ontology_enrichment_uberon_v019=UBERON:0001893;4.34e-11;34!UBERON:0002385;5.47e-11;31!UBERON:0001015;5.47e-11;31!UBERON:0000383;5.47e-11;31!UBERON:0001869;5.77e-11;32!UBERON:0003528;8.77e-11;34!UBERON:0002020;8.77e-11;34!UBERON:0002791;1.66e-10;32!UBERON:0000956;4.03e-10;25!UBERON:0000203;4.03e-10;25!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0002780;1.12e-08;41!UBERON:0001890;1.12e-08;41!UBERON:0002619;3.74e-08;22!UBERON:0001017;4.53e-08;75!UBERON:0001950;1.25e-07;20!UBERON:0001134;2.00e-07;16!UBERON:0002036;2.00e-07;16!UBERON:0004733;5.87e-07;12!UBERON:0002028;5.87e-07;12!UBERON:0001016;7.63e-07;83!UBERON:0000955;7.84e-07;68
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|short_description=p2@SYTL2
|short_description=p2@SYTL2
}}
}}

Latest revision as of 21:15, 24 September 2015

Short description:p2@SYTL2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_SYTL2_5end
Coexpression cluster:C3209_renal_anaplastic_Fibroblast_mesenchymal_clear_mucinous_glioblastoma
Association with transcript: 0bp_to_ENST00000530894, ENST00000532995, ENST00000533057, ENST00000533892_5end
EntrezGene:SYTL2
HGNC: 15585
UniProt: E9PIB5E9PQL8
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data