FFCP PHASE1:Hg19::chr10:5334568..5334596,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:5334568..5334596,+
|short_description=p@chr10:5334568..5334596,+
|description=CAGE_peak_at_chr10:5334568..5334596,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:5334568..5334596,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:5334568..5334596,+ | |||
|id=chr10:5334568..5334596,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.78e-32!172;CL:0000566!1.78e-32!172;CL:0002087!9.77e-30!119;CL:0000988!2.82e-29!182;CL:0002032!7.17e-29!165;CL:0000837!7.17e-29!165;CL:0000738!1.62e-28!140;CL:0002031!5.93e-23!124;CL:0000791!2.43e-21!18;CL:0000789!2.43e-21!18;CL:0002420!2.43e-21!18;CL:0002419!2.43e-21!18;CL:0000790!2.43e-21!18;CL:0000084!3.36e-19!25;CL:0000827!3.36e-19!25;CL:0002057!2.50e-18!42;CL:0000763!3.26e-17!112;CL:0000049!3.26e-17!112;CL:0000860!1.69e-16!45;CL:0002194!6.20e-16!63;CL:0000576!6.20e-16!63;CL:0000040!6.20e-16!63;CL:0000559!6.20e-16!63;CL:0002009!4.00e-15!65;CL:0000766!2.29e-14!76;CL:0000839!2.58e-13!70;CL:0000557!5.51e-13!71;CL:0000625!3.19e-12!11;CL:0000542!4.18e-11!53;CL:0000051!4.18e-11!53;CL:0000838!1.47e-10!52;CL:0000624!1.05e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.85e-37;18!CL:0000789;2.85e-37;18!CL:0002419;2.85e-37;18!CL:0000084;2.52e-29;25!CL:0000624;1.73e-19;6!CL:0000625;8.72e-18;11!CL:0000226;1.95e-10;3!CL:0000842;1.95e-10;3!CL:0000898;3.69e-10;3!CL:0000623;6.61e-10;3!CL:0002087;7.38e-10;104!CL:0000542;3.17e-09;53!CL:0000815;1.66e-07;2!CL:0000792;1.66e-07;2!CL:0002677;1.66e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.75e-38,18;CL:0000789,9.75e-38,18;CL:0002420,9.75e-38,18;CL:0002419,9.75e-38,18;CL:0000790,9.75e-38,18;CL:0000084,1.48e-29,25;CL:0000827,1.48e-29,25;CL:0002087,1.52e-22,115;CL:0000624,9.45e-20,6;CL:0000738,4.24e-19,136;CL:0000625,4.80e-18,11;CL:0000838,1.30e-17,52;CL:0000542,3.46e-17,53;CL:0000051,3.46e-17,53;CL:0002031,8.62e-17,120;CL:0000037,7.57e-14,168;CL:0000988,1.02e-12,177;CL:0002032,1.43e-11,161;CL:0000837,1.43e-11,161;CL:0000226,1.26e-10,3;CL:0000842,1.26e-10,3;CL:0000898,1.75e-10,3;CL:0000623,5.50e-10,3;CL:0000825,5.50e-10,3;CL:0000815,1.16e-07,2;CL:0000792,1.16e-07,2;CL:0002677,1.16e-07,2;CL:0000893,4.49e-07,2;CL:0002489,4.49e-07,2;CL:0000809,4.49e-07,2;CL:0000808,4.49e-07,2;CL:0000894,4.49e-07,2;CL:0000806,4.49e-07,2;CL:0000807,4.49e-07,2;CL:0000805,4.49e-07,2;CL:0002425,4.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.85e-37;18!CL:0000051;3.17e-09;53!CL:0002425;5.75e-07;2 | |||
|ontology_enrichment_disease=DOID:1240!2.34e-08!39;DOID:2531!1.40e-07!51;DOID:0060083!1.40e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-21!102;UBERON:0003061!3.57e-21!102;UBERON:0002193!5.58e-20!112;UBERON:0002371!2.00e-10!80;UBERON:0002405!2.62e-10!115;UBERON:0000178!2.85e-10!15;UBERON:0000179!2.85e-10!15;UBERON:0000463!2.85e-10!15;UBERON:0001474!4.78e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.58e-16;15!UBERON:0000179;8.58e-16;15!UBERON:0000463;8.58e-16;15!UBERON:0002390;7.76e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.93e-16,15;UBERON:0000179,5.93e-16,15;UBERON:0000463,5.93e-16,15;UBERON:0002193,3.87e-11,108;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.57345710739562,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,1.60435557976113,0.651032612147555,0.223915474239924,1.29557466407592,0,0.726991193897824,0.377875943688809,0.727752183563449,0.697287110717054,0.411167888021826,0.929119112685311,1.43846196161075,1.5369642391746,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,1.12361742222542,1.53041946185451,1.28371610830437,1.27867425159808,1.31940520074686,1.59570926097305,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,1.08594422352558,0,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.72103448273199,5.10913991573914,3.08402248499264,8.02495177875255,5.86660079940463,7.101717086021,3.89653456815823,5.12488101671798,1.76763544484902,1.99380505125259,2.16643091012012,7.68547918354051,5.59255194507476,8.05745732558013,6.35605040907451,8.40428948631652,5.6348894001583,5.88589821797369,2.09071047609954,3.85251765171725,1.91610246800961,4.12352934579156,3.03623630423403,2.54852331459277,2.60433381542567,2.85135613334512,1.80690142893327,4.8634912238679,2.49861453104692,6.39298580518846,1.64225599384209,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,1.18218456121156,1.94064817373566,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,3.23571301227925,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0,0,0,0,0,0.507447609232169,2.29391162142713,2.27858874869665,1.66762242820452,2.05681136543097,3.24236655596359,1.62009431171434,0.79312517629427,0,2.88743956579008,0.245040215981032,0.185803175125719,0,0,0.318852545457645,0.399158742865633,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0,0,0,0.642352300414798,0.605399121573143,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0.976940477010201,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.627921025580099,0.332423363800313,0,0,0,0.37950746544837,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,1.58971689362392,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0.508039992394707,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,1.40963004463334,0.213574825135389,0,0,1.48849806543585,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0,0.0771741581079447,0,0.940634592723046,0,0.471353094203252,0,0,0,0,0.187967835959707,0.257831551894309,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.682821857254437,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.57345710739562,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,1.60435557976113,0.651032612147555,0.223915474239924,1.29557466407592,0,0.726991193897824,0.377875943688809,0.727752183563449,0.697287110717054,0.411167888021826,0.929119112685311,1.43846196161075,1.5369642391746,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,1.12361742222542,1.53041946185451,1.28371610830437,1.27867425159808,1.31940520074686,1.59570926097305,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,1.08594422352558,0,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.72103448273199,5.10913991573914,3.08402248499264,8.02495177875255,5.86660079940463,7.101717086021,3.89653456815823,5.12488101671798,1.76763544484902,1.99380505125259,2.16643091012012,7.68547918354051,5.59255194507476,8.05745732558013,6.35605040907451,8.40428948631652,5.6348894001583,5.88589821797369,2.09071047609954,3.85251765171725,1.91610246800961,4.12352934579156,3.03623630423403,2.54852331459277,2.60433381542567,2.85135613334512,1.80690142893327,4.8634912238679,2.49861453104692,6.39298580518846,1.64225599384209,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,1.18218456121156,1.94064817373566,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,3.23571301227925,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0,0,0,0,0,0.507447609232169,2.29391162142713,2.27858874869665,1.66762242820452,2.05681136543097,3.24236655596359,1.62009431171434,0.79312517629427,0,2.88743956579008,0.245040215981032,0.185803175125719,0,0,0.318852545457645,0.399158742865633,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0,0,0,0.642352300414798,0.605399121573143,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0.976940477010201,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.627921025580099,0.332423363800313,0,0,0,0.37950746544837,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,1.58971689362392,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0.508039992394707,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,1.40963004463334,0.213574825135389,0,0,1.48849806543585,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0,0.0771741581079447,0,0.940634592723046,0,0.471353094203252,0,0,0,0,0.187967835959707,0.257831551894309,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.682821857254437,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr10:5334568..5334596,+ | |||
}} | }} |
Latest revision as of 14:08, 23 July 2015
Short description: | p@chr10:5334568..5334596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5334568..5334596, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 5.93e-16 | 15 |
haemolymphatic fluid | 5.93e-16 | 15 |
organism substance | 5.93e-16 | 15 |
hemolymphoid system | 3.87e-11 | 108 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |