FFCP PHASE1:Hg19::chr11:819562..819579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57104 | |EntrezGene=57104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30802 | |HGNC=30802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK308435_5end | |association_with_transcript=0bp_to_AK308435_5end | ||
|cluster_id=chr11:819562..819579,+ | |||
|coexpression_cluster_id=C659 | |||
|description=CAGE_peak_1_at_PNPLA2_5end | |description=CAGE_peak_1_at_PNPLA2_5end | ||
|id=chr11:819562..819579,+ | |id=chr11:819562..819579,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.60e-16!42;CL:0000860!1.59e-14!45;CL:0000766!4.38e-08!76;CL:0000136!2.50e-07!15 | |ontology_enrichment_celltype=CL:0002057!8.60e-16!42;CL:0000860!1.59e-14!45;CL:0000766!4.38e-08!76;CL:0000136!2.50e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.91e-15;33!CL:0002057;4.91e-15;33!CL:0000136;5.96e-09;13!CL:0000473;5.30e-08;39!CL:0000234;5.30e-08;39!CL:0000576;1.83e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.60e-16,42;CL:0002057,8.60e-16,42;CL:0000473,1.76e-10,48;CL:0000234,1.76e-10,48;CL:0000766,1.13e-08,72;CL:0000136,2.50e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;9.76e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.17e-18!216;UBERON:0001009!7.06e-13!113;UBERON:0004535!1.35e-11!110;UBERON:0000055!3.41e-10!69;UBERON:0000926!4.39e-10!448;UBERON:0004120!4.39e-10!448;UBERON:0006603!4.39e-10!448;UBERON:0003914!5.62e-10!118;UBERON:0002049!3.06e-09!79;UBERON:0007798!3.06e-09!79;UBERON:0001981!5.49e-09!60;UBERON:0007500!5.49e-09!60;UBERON:0004537!5.49e-09!60;UBERON:0006965!5.49e-09!60;UBERON:0002193!1.32e-08!112;UBERON:0004872!5.71e-08!84;UBERON:0002390!4.97e-07!102;UBERON:0003061!4.97e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.14e-17,203;UBERON:0001009,5.20e-13,112;UBERON:0000926,3.01e-12,315;UBERON:0004120,3.01e-12,315;UBERON:0006603,3.01e-12,315;UBERON:0004535,1.02e-11,109;UBERON:0000055,2.32e-10,68;UBERON:0003914,7.51e-10,117;UBERON:0002049,2.25e-09,78;UBERON:0007798,2.25e-09,78;UBERON:0007500,3.73e-09,59;UBERON:0001981,3.73e-09,59;UBERON:0004537,3.73e-09,59;UBERON:0006965,3.73e-09,59;UBERON:0002193,4.70e-09,108;UBERON:0004872,4.44e-08,83;UBERON:0002204,1.02e-07,167;UBERON:0002390,1.96e-07,98;UBERON:0003061,1.96e-07,98 | |||
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| ||
|short_description=p1@PNPLA2 | |short_description=p1@PNPLA2 | ||
}} | }} |
Latest revision as of 17:33, 24 September 2015
Short description: | p1@PNPLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNPLA2_5end |
Coexpression cluster: | C659_Adipocyte_mature_Mesenchymal_breast_heart_adipose_left |
Association with transcript: | 0bp_to_AK308435_5end |
EntrezGene: | PNPLA2 |
HGNC: | 30802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.60e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.60e-16 | 42 |
defensive cell | 1.76e-10 | 48 |
phagocyte | 1.76e-10 | 48 |
myeloid leukocyte | 1.13e-08 | 72 |
fat cell | 2.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.14e-17 | 203 |
circulatory system | 5.20e-13 | 112 |
mesoderm | 3.01e-12 | 315 |
mesoderm-derived structure | 3.01e-12 | 315 |
presumptive mesoderm | 3.01e-12 | 315 |
cardiovascular system | 1.02e-11 | 109 |
vessel | 2.32e-10 | 68 |
epithelial tube | 7.51e-10 | 117 |
vasculature | 2.25e-09 | 78 |
vascular system | 2.25e-09 | 78 |
epithelial tube open at both ends | 3.73e-09 | 59 |
blood vessel | 3.73e-09 | 59 |
blood vasculature | 3.73e-09 | 59 |
vascular cord | 3.73e-09 | 59 |
hemolymphoid system | 4.70e-09 | 108 |
splanchnic layer of lateral plate mesoderm | 4.44e-08 | 83 |
musculoskeletal system | 1.02e-07 | 167 |
hematopoietic system | 1.96e-07 | 98 |
blood island | 1.96e-07 | 98 |