FFCP PHASE1:Hg19::chr10:51565156..51565167,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:51565156..51565167,+
|short_description=p5@NCOA4
|description=CAGE_peak_5_at_NCOA4_5end
|association_with_transcript=-37bp_to_ENST00000498586_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8031 | |EntrezGene=8031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7671 | |HGNC=7671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENST00000498586_5end | |||
|cluster_id=chr10:51565156..51565167,+ | |||
|description=CAGE_peak_5_at_NCOA4_5end | |||
|id=chr10:51565156..51565167,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.26e-07,108;CL:0000049,6.26e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-30!115;UBERON:0001049!1.01e-15!57;UBERON:0005068!1.01e-15!57;UBERON:0006241!1.01e-15!57;UBERON:0007135!1.01e-15!57;UBERON:0002780!3.81e-14!41;UBERON:0001890!3.81e-14!41;UBERON:0006240!3.81e-14!41;UBERON:0003080!5.79e-14!42;UBERON:0002616!7.01e-14!59;UBERON:0001893!1.82e-11!34;UBERON:0002020!2.11e-11!34;UBERON:0003528!2.11e-11!34;UBERON:0002791!5.48e-11!33;UBERON:0000955!1.10e-10!69;UBERON:0006238!1.10e-10!69;UBERON:0001869!2.43e-10!32;UBERON:0001017!1.53e-09!82;UBERON:0002619!5.90e-09!22;UBERON:0005743!1.05e-08!86;UBERON:0001950!3.11e-08!20;UBERON:0000956!1.43e-07!25;UBERON:0000203!1.43e-07!25;UBERON:0003075!5.87e-07!86;UBERON:0007284!5.87e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.18e-11;41!UBERON:0001890;5.18e-11;41!UBERON:0000073;1.43e-10;53!UBERON:0002616;1.43e-10;53!UBERON:0001893;3.36e-10;34!UBERON:0003528;3.50e-10;34!UBERON:0002020;3.50e-10;34!UBERON:0002791;8.06e-10;32!UBERON:0001869;1.01e-09;32!UBERON:0002619;3.42e-09;22!UBERON:0001950;2.18e-08;20!UBERON:0007023;2.79e-08;114!UBERON:0000956;6.37e-08;25!UBERON:0000203;6.37e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.78e-30,114;UBERON:0000073,1.12e-15,53;UBERON:0002616,1.12e-15,53;UBERON:0001049,1.21e-15,56;UBERON:0005068,1.21e-15,56;UBERON:0006241,1.21e-15,56;UBERON:0007135,1.21e-15,56;UBERON:0002780,3.52e-14,41;UBERON:0001890,3.52e-14,41;UBERON:0003080,3.52e-14,41;UBERON:0006240,3.52e-14,41;UBERON:0001893,1.80e-11,34;UBERON:0003528,2.09e-11,34;UBERON:0002020,2.09e-11,34;UBERON:0000955,7.06e-11,68;UBERON:0006238,7.06e-11,68;UBERON:0002791,1.98e-10,32;UBERON:0001869,2.47e-10,32;UBERON:0001017,1.69e-09,81;UBERON:0002619,4.73e-09,22;UBERON:0001950,2.55e-08,20;UBERON:0010314,1.46e-07,132;UBERON:0000956,1.55e-07,25;UBERON:0000203,1.55e-07,25;UBERON:0003075,2.38e-07,82;UBERON:0007284,2.38e-07,82;UBERON:0000479,3.15e-07,773;UBERON:0003081,8.15e-07,203;UBERON:0002390,8.91e-07,98;UBERON:0003061,8.91e-07,98 | |||
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| ||
|short_description=p5@NCOA4 | |||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p5@NCOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NCOA4_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000498586_5end |
EntrezGene: | NCOA4 |
HGNC: | 7671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.26e-07 | 108 |
common myeloid progenitor | 6.26e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.78e-30 | 114 |
regional part of nervous system | 1.12e-15 | 53 |
regional part of brain | 1.12e-15 | 53 |
neural tube | 1.21e-15 | 56 |
neural rod | 1.21e-15 | 56 |
future spinal cord | 1.21e-15 | 56 |
neural keel | 1.21e-15 | 56 |
regional part of forebrain | 3.52e-14 | 41 |
forebrain | 3.52e-14 | 41 |
anterior neural tube | 3.52e-14 | 41 |
future forebrain | 3.52e-14 | 41 |
telencephalon | 1.80e-11 | 34 |
brain grey matter | 2.09e-11 | 34 |
gray matter | 2.09e-11 | 34 |
brain | 7.06e-11 | 68 |
future brain | 7.06e-11 | 68 |
regional part of telencephalon | 1.98e-10 | 32 |
cerebral hemisphere | 2.47e-10 | 32 |
central nervous system | 1.69e-09 | 81 |
regional part of cerebral cortex | 4.73e-09 | 22 |
neocortex | 2.55e-08 | 20 |
structure with developmental contribution from neural crest | 1.46e-07 | 132 |
cerebral cortex | 1.55e-07 | 25 |
pallium | 1.55e-07 | 25 |
neural plate | 2.38e-07 | 82 |
presumptive neural plate | 2.38e-07 | 82 |
tissue | 3.15e-07 | 773 |
lateral plate mesoderm | 8.15e-07 | 203 |
hematopoietic system | 8.91e-07 | 98 |
blood island | 8.91e-07 | 98 |