FFCP PHASE1:Hg19::chr10:50887683..50887735,+: Difference between revisions
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|id=chr10:50887683..50887735,+
|short_description=p1@C10orf53
|description=CAGE_peak_1_at_C10orf53_5end
|association_with_transcript=0bp_to_ENST00000374111,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282966 | |EntrezGene=282966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27421 | |HGNC=27421 | ||
|UniProt=Q8N6V4, | |TSSclassifier=strong | ||
|UniProt=Q8N6V4,B9ZVK6 | |||
|association_with_transcript=0bp_to_ENST00000374111,ENST00000374112,ENST00000374113,ENST00000535836,NM_001042427,NM_182554,uc001jib.2,uc001jic.1,uc001jid.1_5end | |||
|cluster_id=chr10:50887683..50887735,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_C10orf53_5end | |||
|id=chr10:50887683..50887735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-18!57;UBERON:0005068!3.00e-18!57;UBERON:0006241!3.00e-18!57;UBERON:0007135!3.00e-18!57;UBERON:0007023!1.11e-16!115;UBERON:0005743!1.69e-15!86;UBERON:0002616!2.61e-15!59;UBERON:0001896!9.06e-15!3;UBERON:0005290!9.06e-15!3;UBERON:0010096!9.06e-15!3;UBERON:0001017!1.05e-14!82;UBERON:0000955!3.96e-14!69;UBERON:0006238!3.96e-14!69;UBERON:0000073!1.23e-13!94;UBERON:0001016!1.23e-13!94;UBERON:0001893!5.16e-13!34;UBERON:0002780!1.19e-12!41;UBERON:0001890!1.19e-12!41;UBERON:0006240!1.19e-12!41;UBERON:0003075!2.35e-12!86;UBERON:0007284!2.35e-12!86;UBERON:0003080!2.67e-12!42;UBERON:0002346!1.23e-11!90;UBERON:0001869!1.55e-11!32;UBERON:0002791!3.88e-11!33;UBERON:0000033!1.55e-09!123;UBERON:0002298!2.52e-09!8;UBERON:0003056!3.15e-09!61;UBERON:0000153!6.71e-09!129;UBERON:0007811!6.71e-09!129;UBERON:0002020!9.17e-09!34;UBERON:0003528!9.17e-09!34;UBERON:0000956!1.54e-07!25;UBERON:0000203!1.54e-07!25;UBERON:0004121!1.88e-07!169;UBERON:0003076!2.06e-07!15;UBERON:0003057!2.06e-07!15;UBERON:0000924!3.55e-07!173;UBERON:0006601!3.55e-07!173;UBERON:0001950!3.99e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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| ||
|short_description=p1@C10orf53 | |||
}} | }} |
Latest revision as of 10:13, 18 September 2015
Short description: | p1@C10orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C10orf53_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000374111, ENST00000374112, ENST00000374113, ENST00000535836, NM_001042427, NM_182554, uc001jib.2, uc001jic.1, uc001jid.1_5end |
EntrezGene: | C10orf53 |
HGNC: | 27421 |
UniProt: | Q8N6V4B9ZVK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |