FFCP PHASE1:Hg19::chr11:77899842..77899854,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57558 | |EntrezGene=57558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20061 | |HGNC=20061 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK78,B3KPE1,Q9P2H5 | |UniProt=E9PK78,B3KPE1,Q9P2H5 | ||
|association_with_transcript=-3bp_to_ENST00000530267,NM_020798,uc001ozc.2,uc001oze.2,uc010rsp.1_5end | |association_with_transcript=-3bp_to_ENST00000530267,NM_020798,uc001ozc.2,uc001oze.2,uc010rsp.1_5end | ||
|cluster_id=chr11:77899842..77899854,+ | |||
|description=CAGE_peak_3_at_USP35_5end | |description=CAGE_peak_3_at_USP35_5end | ||
|id=chr11:77899842..77899854,+ | |id=chr11:77899842..77899854,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;7.36e-18;1!CL:0000557;7.36e-18;1!CL:0002363;1.33e-09;2!CL:0002615;8.14e-07;3!CL:0002567;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.71e-09,2;CL:0000008,1.71e-09,2;CL:0002567,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.33e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.33e-09;2!UBERON:0003566;1.33e-09;2!UBERON:0005058;1.33e-09;2!UBERON:0001777;1.33e-09;2!UBERON:0009113;1.33e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.71e-09,2;UBERON:0001777,1.71e-09,2 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633765858935825,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0,0,0.786839080455332,0.786021525498329,0.411202997999018,1.00311897234407,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0.664601683750863,0.270803863765016,0.768547918354051,0.260118695119756,0.657751618414705,0.829050053357545,0,0.593146252648242,0.535081656179426,2.09071047609954,0.793165398882963,0.766440987203842,1.37450978193052,0.759059076058509,0.95569624297229,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0.515281080091258,0,0,0,0.504867548488229,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0,0,0,0,0.352193736052904,0.414656231081544,0,0.12624243342638,0,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0.254094624222463,0,0.773288812777695,1.17261385734044,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0.426851060090485,0,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0.113942055847001,0,0.179515288819544,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0.476809736941136,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.789168805698781,1.20990716048664,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0.240476460754601,0.426905989478705,0,0.288180834308212,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0.670869375198532,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.500763722825999,0,0,0.0620964029413835,0.276697269872462,0,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0.678930119816101,0.212574920101683,0.247871528518004,0,0.318004350653419,0.394308725006267,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0.756215088665154,0.760729777106397,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0,0,0.405225507710368,0.781078098613847,0,0.507326481551255,0,0,0,0,0,0.535701835878287,0,0,0.455324382702595,0.177404740325278,0.230467975111559,0.171488009437418,0.135939465953663,0.526182188502793,0,0,0,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.193373663920732,0.0999411559249289,0,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.516711278688049,1.55186785739645,0,0.190941474834495,0,0.217716747896961,0,0.336760265072938,0.215166616178029,0.332660356546013,0.162806537221949,0.213454691755431,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633765858935825,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0,0,0.786839080455332,0.786021525498329,0.411202997999018,1.00311897234407,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0.664601683750863,0.270803863765016,0.768547918354051,0.260118695119756,0.657751618414705,0.829050053357545,0,0.593146252648242,0.535081656179426,2.09071047609954,0.793165398882963,0.766440987203842,1.37450978193052,0.759059076058509,0.95569624297229,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0.515281080091258,0,0,0,0.504867548488229,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0,0,0,0,0.352193736052904,0.414656231081544,0,0.12624243342638,0,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0.254094624222463,0,0.773288812777695,1.17261385734044,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0.426851060090485,0,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0.113942055847001,0,0.179515288819544,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0.476809736941136,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.789168805698781,1.20990716048664,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0.240476460754601,0.426905989478705,0,0.288180834308212,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0.670869375198532,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.500763722825999,0,0,0.0620964029413835,0.276697269872462,0,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0.678930119816101,0.212574920101683,0.247871528518004,0,0.318004350653419,0.394308725006267,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0.756215088665154,0.760729777106397,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0,0,0.405225507710368,0.781078098613847,0,0.507326481551255,0,0,0,0,0,0.535701835878287,0,0,0.455324382702595,0.177404740325278,0.230467975111559,0.171488009437418,0.135939465953663,0.526182188502793,0,0,0,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.193373663920732,0.0999411559249289,0,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.516711278688049,1.55186785739645,0,0.190941474834495,0,0.217716747896961,0,0.336760265072938,0.215166616178029,0.332660356546013,0.162806537221949,0.213454691755431,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p3@USP35 | |short_description=p3@USP35 | ||
}} | }} |
Latest revision as of 15:00, 24 September 2015
Short description: | p3@USP35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP35_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000530267, NM_020798, uc001ozc.2, uc001oze.2, uc010rsp.1_5end |
EntrezGene: | USP35 |
HGNC: | 20061 |
UniProt: | E9PK78B3KPE1Q9P2H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.71e-09 | 2 |
migratory cranial neural crest cell | 1.71e-09 | 2 |
light melanocyte | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.71e-09 | 2 |
substantia propria of cornea | 1.71e-09 | 2 |