FFCP PHASE1:Hg19::chr11:76494080..76494119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526585,ENST00000527778,ENST00000528075_5end | |association_with_transcript=0bp_to_ENST00000526585,ENST00000527778,ENST00000528075_5end | ||
|cluster_id=chr11:76494080..76494119,- | |||
|description=CAGE_peak_1_at_ENST00000526585_5end,CAGE_peak_1_at_ENST00000527778_5end,CAGE_peak_1_at_ENST00000528075_5end | |description=CAGE_peak_1_at_ENST00000526585_5end,CAGE_peak_1_at_ENST00000527778_5end,CAGE_peak_1_at_ENST00000528075_5end | ||
|id=chr11:76494080..76494119,- | |id=chr11:76494080..76494119,- | ||
|ontology_enrichment_celltype=CL:0000066!1.50e-16!254;CL:0000223!2.39e-07!59;CL:0002076!4.40e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.50e-16!254;CL:0000223!2.39e-07!59;CL:0002076!4.40e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.50e-14,253;CL:0000223,7.08e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.44e-13!106;DOID:0050687!1.16e-12!143;DOID:162!8.04e-08!235;DOID:14566!9.26e-08!239 | |ontology_enrichment_disease=DOID:305!8.44e-13!106;DOID:0050687!1.16e-12!143;DOID:162!8.04e-08!235;DOID:14566!9.26e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.57e-11,106;DOID:0050687,6.45e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.41e-13!169;UBERON:0000925!6.41e-13!169;UBERON:0006595!6.41e-13!169;UBERON:0001007!1.17e-11!155;UBERON:0001555!1.17e-11!155;UBERON:0007026!1.17e-11!155;UBERON:0003104!3.54e-10!238;UBERON:0009142!3.54e-10!238;UBERON:0000481!6.93e-10!347;UBERON:0004921!1.46e-08!129;UBERON:0004185!1.46e-08!129;UBERON:0005911!2.92e-08!82;UBERON:0000475!4.38e-08!365;UBERON:0002100!1.12e-07!216;UBERON:0000077!1.41e-07!130;UBERON:0001008!3.55e-07!45;UBERON:0006554!4.09e-07!44 | |ontology_enrichment_uberon=UBERON:0004119!6.41e-13!169;UBERON:0000925!6.41e-13!169;UBERON:0006595!6.41e-13!169;UBERON:0001007!1.17e-11!155;UBERON:0001555!1.17e-11!155;UBERON:0007026!1.17e-11!155;UBERON:0003104!3.54e-10!238;UBERON:0009142!3.54e-10!238;UBERON:0000481!6.93e-10!347;UBERON:0004921!1.46e-08!129;UBERON:0004185!1.46e-08!129;UBERON:0005911!2.92e-08!82;UBERON:0000475!4.38e-08!365;UBERON:0002100!1.12e-07!216;UBERON:0000077!1.41e-07!130;UBERON:0001008!3.55e-07!45;UBERON:0006554!4.09e-07!44 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.59e-09,82;UBERON:0004119,4.11e-09,160;UBERON:0000925,4.11e-09,160;UBERON:0006595,4.11e-09,160;UBERON:0001007,7.82e-09,145;UBERON:0001555,7.82e-09,145;UBERON:0007026,7.82e-09,145;UBERON:0004921,1.74e-07,118;UBERON:0005157,7.87e-07,47 | |||
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|phase1_expression=0.726713517082227,1.92690471501885,1.26858963686374,0,2.68176656656373,0.872338524100369,0,0.631719873426831,2.61185628199839,0.982935746006035,0,0.655324116390517,0.263766978228454,1.11389717664042,0.331397375727916,0.672325146451775,1.20538905604795,0,0,0.738726348460727,0.204000691244253,0,1.43117993565528,2.73748850145768,0.502170558379211,0.0764134057479513,0,0,0,0,0,2.75826367343678,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.724232594804119,0,0,3.49778823507051,3.99112915432615,2.10803485663503,0.392937226493138,2.18577172975525,1.85392221392215,0.324547393654683,0.870648686496336,0.797747763113191,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0,0,1.06729878806013,1.33888245105868,0.805658634218294,0,0,0,0,0.625098097988558,0.898117490504679,1.12611480483322,0,0,0.183201743930407,0,0,1.74437620857014,0.496971951695318,0.25326102332916,2.38336525463794,2.0078563452417,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,1.51357427644931,0,0.70296429550139,0.312160076830321,0,0.298897361103602,0.23486899728753,0.485618833104395,0.280901613404497,0.816616685019573,0.368502951935304,1.23990937410919,0,0.989067717114227,0,0,0.336672227908132,1.00094815897571,0,0.877955241761676,0.30648779579902,0.45071417671979,0.340296549480063,0.89694817844431,0.427114777637135,0.423863802319124,0.900273288253207,1.03052529238439,0.515281080091258,0.558350568994769,1.0126579934476,0.779496041289589,0.757301322732344,0.460249493211497,3.23292113637624,0.355009592516614,0.10075209822764,0.847802961552438,1.93260853163297,2.45471508531751,0.860413786167011,1.58565817968474,0.795178609928912,2.90484857173796,1.24393266018445,1.51392510525377,2.18986415445498,0,1.28648187638577,2.76269842704961,0.464367928031979,1.44375896333917,1.65629520055781,0.674338760312407,0.723033089650446,1.43382164552112,1.08939722046203,0.949082476444386,0.808987848960987,0.98110732562673,2.30848294167834,0,0,0,1.47008711385542,2.53510069643662,0,1.18157981336281,0,7.99424850530238,0.171567810298526,1.42675371031213,0,0.402115889646523,0.740707561268237,0.651616610620649,0,0,0.579652024875384,0.821860859650752,0.288732895522148,0,0.761016608938393,0.790204397959275,0,0.246217006087397,1.17002132569619,0.297262324577456,0,0.839910640994298,1.41775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0.528290604079356,0.207328115540772,1.44119953416961,0.88369703398466,1.0159663086747,2.67391897890794,2.34434894420094,1.71072446022705,0.205654985406647,0.901029173531752,0.285826432630578,1.00917975910825,0.43596006883328,0.51336800074665,0.517086863031111,3.57656445851882,0,0.531876233169741,0,0.771622122786426,0,0.532844358032199,0.714889968290738,3.25572963234866,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.335032530668698,0,0,0,0,0.49076596687656,2.50085260529839,0,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0.368738337083406,0.60818530127658,1.37060810223918,0.686286847621712,0,0,0,0,0,0.604780586659361,0.992431231275107,0.61384789315225,0,0.640695746278505,1.02341449813341,0.321707842287215,0,1.54209693802656,0.532685175939381,0.410635780069046,1.03850885836724,0.464841513839837,3.14234568938218,1.40354529212299,1.01289087829486,0.68888668898764,0.910455840033585,1.96686622439136,0.902399225814824,0.539107359730903,1.56869953835371,1.46139224653261,0.316654886678627,2.27466768141793,0.850468526382578,0.863663664408557,1.54227252690289,1.08378575017541,0.501689773854853,0.254876273045038,0,0.671624264166535,0.219259876645935,0,1.79515087581472,1.96808787419823,0.976135183992909,1.44257416306811,0.640986253728404,1.07262349896764,0,1.30012049207304,0,0.386682873168488,1.07834031980251,0.921022048356777,0,1.93356440762893,0.435050081742686,0.340906509664404,0.623224249527161,1.32227932288782,1.34533047155574,9.06050258711547,0.6069466851333,0.464845549297286,3.77774816196768,0,0.924100740528266,1.06461206063404,1.73986598415015,0.37064843820784,0.286249773483982,2.232950216158,0.316379424718726,0.38126038784765,0.255897791311334,0,0.636406495851874,0.78494864019923,1.97859703341646,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,2.11300293513511,1.36499911407986,3.11091950298168,0,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.405820753925408,0.6196469961995,0.845086807596724,0.286822704408103,0.294747123039363,0,0.709522128141196,0.211107635297664,0.329294892959902,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| ||
|short_description=p1@ENST00000526585,p1@ENST00000527778,p1@ENST00000528075 | |short_description=p1@ENST00000526585,p1@ENST00000527778,p1@ENST00000528075 | ||
}} | }} |
Latest revision as of 02:40, 24 July 2015
Short description: | p1@ENST00000526585, p1@ENST00000527778, p1@ENST00000528075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000526585_5end, CAGE_peak_1_at_ENST00000527778_5end, CAGE_peak_1_at_ENST00000528075_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526585, ENST00000527778, ENST00000528075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.50e-14 | 253 |
endodermal cell | 7.08e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.59e-09 | 82 |
endoderm-derived structure | 4.11e-09 | 160 |
endoderm | 4.11e-09 | 160 |
presumptive endoderm | 4.11e-09 | 160 |
digestive system | 7.82e-09 | 145 |
digestive tract | 7.82e-09 | 145 |
primitive gut | 7.82e-09 | 145 |
subdivision of digestive tract | 1.74e-07 | 118 |
epithelial fold | 7.87e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.57e-11 | 106 |
cell type cancer | 6.45e-09 | 143 |