FFCP PHASE1:Hg19::chr11:75063238..75063247,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=408 | |EntrezGene=408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=711 | |HGNC=711 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z1Q3,P49407 | |UniProt=B7Z1Q3,P49407 | ||
|association_with_transcript=-363bp_to_NM_004041,NM_020251_5end | |association_with_transcript=-363bp_to_NM_004041,NM_020251_5end | ||
|cluster_id=chr11:75063238..75063247,- | |||
|description=CAGE_peak_16_at_ARRB1_5end | |description=CAGE_peak_16_at_ARRB1_5end | ||
|id=chr11:75063238..75063247,- | |id=chr11:75063238..75063247,- | ||
|ontology_enrichment_celltype=CL:0002322!3.12e-14!5;CL:0000039!7.82e-10!7;CL:0000586!7.82e-10!7 | |ontology_enrichment_celltype=CL:0002322!3.12e-14!5;CL:0000039!7.82e-10!7;CL:0000586!7.82e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.81e-41;7!CL:0000586;3.81e-41;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.20e-41,7;CL:0000586,5.20e-41,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.22e-44;10!UBERON:0005564;1.22e-44;10 | |||
|ontology_enrichment_disease=DOID:8692!5.96e-12!31;DOID:3095!3.83e-10!22;DOID:2994!3.83e-10!22;DOID:1240!7.56e-09!39;DOID:2531!4.73e-07!51;DOID:0060083!4.73e-07!51 | |ontology_enrichment_disease=DOID:8692!5.96e-12!31;DOID:3095!3.83e-10!22;DOID:2994!3.83e-10!22;DOID:1240!7.56e-09!39;DOID:2531!4.73e-07!51;DOID:0060083!4.73e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.92e-20;22!DOID:2994;1.92e-20;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.31e-20,22;DOID:2994,2.31e-20,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.54e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.46e-36;8!UBERON:0003135;2.18e-26;11!UBERON:0000991;2.09e-21;21!UBERON:0003101;2.06e-13;22!UBERON:0000079;2.06e-13;22!UBERON:0002323;4.46e-08;45!UBERON:0000922;1.69e-07;49!UBERON:0003133;4.03e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.85e-36,8;UBERON:0003135,2.66e-26,11;UBERON:0000991,2.53e-21,21;UBERON:0009196,2.53e-21,21;UBERON:0009117,2.53e-21,21;UBERON:0005564,2.53e-21,21;UBERON:0004176,2.31e-20,22;UBERON:0003101,2.27e-13,22;UBERON:0000079,2.27e-13,22;UBERON:0002323,8.37e-10,46;UBERON:0003133,2.13e-09,48;UBERON:0004458,3.31e-09,49;UBERON:0003886,2.34e-08,54;UBERON:0005156,1.19e-07,59;UBERON:0000990,1.19e-07,59;UBERON:0002553,2.12e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,0.795178609928912,0.580969714347592,0.725627385107593,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99579371432817,0.957526850661834,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0.338583555603207,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,1.89318974933188,0.66614393599564,2.81974010175699,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0.424059214301822,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,3.85807556316046,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,1.38783067318587,0.327796715891087,0.126698501011437,1.32585478664576,2.13773924212448,1.74600309116205,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,0.795178609928912,0.580969714347592,0.725627385107593,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99579371432817,0.957526850661834,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0.338583555603207,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,1.89318974933188,0.66614393599564,2.81974010175699,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0.424059214301822,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,3.85807556316046,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,1.38783067318587,0.327796715891087,0.126698501011437,1.32585478664576,2.13773924212448,1.74600309116205,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p16@ARRB1 | |short_description=p16@ARRB1 | ||
}} | }} |
Latest revision as of 05:59, 20 September 2015
Short description: | p16@ARRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ARRB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -363bp_to_NM_004041, NM_020251_5end |
EntrezGene: | ARRB1 |
HGNC: | 711 |
UniProt: | B7Z1Q3P49407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.20e-41 | 7 |
germ cell | 5.20e-41 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.85e-36 | 8 |
male reproductive organ | 2.66e-26 | 11 |
gonad | 2.53e-21 | 21 |
indifferent external genitalia | 2.53e-21 | 21 |
indifferent gonad | 2.53e-21 | 21 |
gonad primordium | 2.53e-21 | 21 |
external genitalia | 2.31e-20 | 22 |
male organism | 2.27e-13 | 22 |
male reproductive system | 2.27e-13 | 22 |
body cavity | 8.37e-10 | 46 |
reproductive organ | 2.13e-09 | 48 |
body cavity or lining | 3.31e-09 | 49 |
body cavity precursor | 2.34e-08 | 54 |
reproductive structure | 1.19e-07 | 59 |
reproductive system | 1.19e-07 | 59 |
anatomical cavity | 2.12e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.31e-20 | 22 |
germ cell cancer | 2.31e-20 | 22 |