FFCP PHASE1:Mm9::chr9:114843047..114843117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=333433 | |EntrezGene=333433 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3ULJ0,B2RSR7 | |UniProt=Q3ULJ0,B2RSR7 | ||
|association_with_transcript=0bp_to_ENSMUST00000146623,NM_175380,uc009ryj.2,uc009ryk.2_5end | |association_with_transcript=0bp_to_ENSMUST00000146623,NM_175380,uc009ryj.2,uc009ryk.2_5end | ||
|cluster_id=chr9:114843047..114843117,- | |||
|description=CAGE_peak_2_at_Gpd1l_5end | |description=CAGE_peak_2_at_Gpd1l_5end | ||
|id=chr9:114843047..114843117,- | |id=chr9:114843047..114843117,- | ||
|ontology_enrichment_celltype=CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0002319!1.16e-09!43;CL:0000055!1.30e-08!50;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33;CL:0000393!7.45e-07!39;CL:0000211!7.45e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0002319!1.16e-09!43;CL:0000055!1.30e-08!50;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33;CL:0000393!7.45e-07!39;CL:0000211!7.45e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-12,23;CL:0000337,1.27e-12,23;CL:0000221,6.16e-10,44;CL:0000133,6.16e-10,44;CL:0002319,1.16e-09,43;CL:0000540,1.77e-07,33;CL:0000047,1.77e-07,33;CL:0000031,1.77e-07,33;CL:0000404,1.77e-07,33;CL:0000393,7.44e-07,39;CL:0000211,7.44e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.96e-27!73;UBERON:0005743!6.96e-27!73;UBERON:0001049!7.02e-27!52;UBERON:0005068!7.02e-27!52;UBERON:0006241!7.02e-27!52;UBERON:0007135!7.02e-27!52;UBERON:0000955!1.27e-25!50;UBERON:0006238!1.27e-25!50;UBERON:0000073!1.65e-25!75;UBERON:0001016!1.65e-25!75;UBERON:0002616!5.42e-25!49;UBERON:0000033!8.46e-24!63;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0002346!1.78e-21!71;UBERON:0003075!1.78e-21!71;UBERON:0007284!1.78e-21!71;UBERON:0002020!2.06e-20!34;UBERON:0003080!9.94e-20!40;UBERON:0002780!3.83e-19!39;UBERON:0001890!3.83e-19!39;UBERON:0006240!3.83e-19!39;UBERON:0003056!3.02e-18!49;UBERON:0002791!2.56e-17!29;UBERON:0003528!2.56e-17!29;UBERON:0001893!2.56e-17!29;UBERON:0007811!5.64e-15!86;UBERON:0004111!2.77e-13!122;UBERON:0000956!3.79e-13!21;UBERON:0001869!3.79e-13!21;UBERON:0000203!3.79e-13!21;UBERON:0000025!5.67e-13!114;UBERON:0000153!7.18e-12!94;UBERON:0002619!3.53e-11!17;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0003076!1.20e-07!12;UBERON:0003057!1.20e-07!12;UBERON:0000477!3.42e-07!154 | |ontology_enrichment_uberon=UBERON:0001017!6.96e-27!73;UBERON:0005743!6.96e-27!73;UBERON:0001049!7.02e-27!52;UBERON:0005068!7.02e-27!52;UBERON:0006241!7.02e-27!52;UBERON:0007135!7.02e-27!52;UBERON:0000955!1.27e-25!50;UBERON:0006238!1.27e-25!50;UBERON:0000073!1.65e-25!75;UBERON:0001016!1.65e-25!75;UBERON:0002616!5.42e-25!49;UBERON:0000033!8.46e-24!63;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0002346!1.78e-21!71;UBERON:0003075!1.78e-21!71;UBERON:0007284!1.78e-21!71;UBERON:0002020!2.06e-20!34;UBERON:0003080!9.94e-20!40;UBERON:0002780!3.83e-19!39;UBERON:0001890!3.83e-19!39;UBERON:0006240!3.83e-19!39;UBERON:0003056!3.02e-18!49;UBERON:0002791!2.56e-17!29;UBERON:0003528!2.56e-17!29;UBERON:0001893!2.56e-17!29;UBERON:0007811!5.64e-15!86;UBERON:0004111!2.77e-13!122;UBERON:0000956!3.79e-13!21;UBERON:0001869!3.79e-13!21;UBERON:0000203!3.79e-13!21;UBERON:0000025!5.67e-13!114;UBERON:0000153!7.18e-12!94;UBERON:0002619!3.53e-11!17;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0003076!1.20e-07!12;UBERON:0003057!1.20e-07!12;UBERON:0000477!3.42e-07!154 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-28,54;UBERON:0001017,6.92e-27,73;UBERON:0001049,6.98e-27,52;UBERON:0005068,6.98e-27,52;UBERON:0006241,6.98e-27,52;UBERON:0007135,6.98e-27,52;UBERON:0001016,1.64e-25,75;UBERON:0000955,1.16e-23,47;UBERON:0006238,1.16e-23,47;UBERON:0002616,4.82e-23,46;UBERON:0002346,7.84e-23,64;UBERON:0003075,7.84e-23,64;UBERON:0007284,7.84e-23,64;UBERON:0010314,1.67e-22,92;UBERON:0004121,2.41e-22,95;UBERON:0000924,2.41e-22,95;UBERON:0006601,2.41e-22,95;UBERON:0010371,2.32e-21,73;UBERON:0002020,2.06e-20,34;UBERON:0003080,9.90e-20,40;UBERON:0002780,3.81e-19,39;UBERON:0001890,3.81e-19,39;UBERON:0006240,3.81e-19,39;UBERON:0003056,3.01e-18,49;UBERON:0003528,2.55e-17,29;UBERON:0002791,2.55e-17,29;UBERON:0001893,2.55e-17,29;UBERON:0004111,2.75e-13,122;UBERON:0000956,3.78e-13,21;UBERON:0001869,3.78e-13,21;UBERON:0000203,3.78e-13,21;UBERON:0000025,5.64e-13,114;UBERON:0002619,3.53e-11,17;UBERON:0002021,6.51e-08,10;UBERON:0000411,6.51e-08,10;UBERON:0001950,6.51e-08,10;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12 | |||
|phase1_expression=9.12848428497326,1.39590163055744,0.909998478779072,2.41971369045464,1.00179145989269,3.02182689441402,2.80335168714631,2.32421982194837,0.985521055061667,2.34064526321993,0.856089841127525,1.67521533890206,2.9104124088305,3.05971408466491,0.666219523631325,1.82227740650843,1.39912375625629,5.99378114180652,6.30726394586398,5.94145512517242,10.6304112688837,1.78723712161594,1.56719873483361,0.799962113967033,1.14704640533585,1.14846392823004,2.15380998079537,1.72376986148711,1.90023419456374,1.51218077855958,1.99557459589774,0.635030673459631,0.61506478758457,0,3.75507105676657,1.32987716286794,1.63335485009895,4.18531630736908,3.1253413780952,3.66466620781659,3.52938892818609,2.73218193983378,5.34061388334269,4.78407908307194,4.56196190487815,4.9557623083654,13.3006528539167,28.9973457985994,17.5748946187577,19.4429899074283,15.2585199571645,14.3752564364972,5.87239121202077,3.62681071005672,3.02484419228218,4.11615097657515,6.87680255853016,9.7977697532714,16.589949790487,21.1596391708813,19.0149421051854,6.09920157724438,4.4464739805557,5.84934816232909,1.97773272513395,7.8152812644071,10.7856039786626,13.4476406862544,17.0050964185903,17.1457541681247,15.3537221786509,28.5650984403804,26.283356373242,13.7189695120749,14.7602025368084,15.6267193723704,30.8324466798288,24.1329068981005,26.5739302533301,21.101806036831,22.8719109006024,22.3992749339407,17.0301629390842,15.1945904708554,17.4190002465564,29.4628585473668,26.7658759902314,25.5367240780662,3.71058347332602,2.87171928405785,8.98579914975201,3.44169550792555,1.3599426674155,0,1.29955283489534,1.34408066129201,4.21333260395256,3.57903677413921,4.1565760736459,3.88673531961374,9.85903938436764,6.41632387071589,7.64415719119937,0,1.29894624606728,0.760079596425296,1.51657333504435,2.62622923353838,2.07150306917737,5.49235914539852,3.64319186208885,4.26251669636998,7.14908041493781,6.93324146542064,6.23220147819235,6.03199638382442,2.22475470960936,6.65157041831594,2.65383165584962,8.7354098971601,4.85851340612866,4.363877278217,1.86391761218122,23.7152445579353,20.1068838540917,4.85368404896324,2.27648736561249,0,1.90605340609597,24.5656648623909,37.0575488283087,27.6439574648302,45.1943232499919,50.6316605514054,29.0903262383384,30.6635987198062,7.43427356107309,3.4833951770826,6.57079171927554,4.20883711772948,3.25301107406759,4.82794419310293,5.40186389416048,4.52114453507145,8.91278138882395,9.22418786050918,10.6819965998091,11.3829483125167,0.646703978798527,1.89106080167819,4.04687585577082,3.28793598641362,5.00485048606076,3.48252166522167,5.14455341019859,3.58261680273288,0.702213187313235,1.28673953557358,3.40996199274711,2.69263504296152,2.11073453982987,5.04173772090842,4.49814997611899,7.28027657465394,5.86215028972037,5.11574678450897,8.31647544338819,7.70651259623319,10.3672705445493,13.2975645904067,14.7545233373457,12.4269989311532,10.0993053033883,11.6759584321523,41.2168299185689,27.0639130557518,1.98251269790279,1.85115396664481,2.13288250535234,4.64473343720877,5.15469845288373,3.83198696784351,1.55664630691409,2.85338439168839,2.37264530772256,7.24675400785648,6.53471542880701,3.97912944082302,7.60359939764569,6.29173586057955,4.97117514711797,4.18196673834171,2.65535061334314,3.31320686568214,1.1270773567308,5.09128319613286,6.40043207653165,7.15385362881249,8.53693251177473,9.44704947069454,4.39596437955849,4.44229790118482,0.889357881261447,1.33476084572875,2.16214894624523,2.47348323623339,1.42002084971952,1.4470629585145,2.5462585178142,1.43848068725405,1.78348749452539,1.64736847912849,1.43768206527355,4.09355042435354,4.36852742360385,2.02063102357689,1.61457672169721,2.41221760681684,9.97667226899665,3.60033682363921,5.37784422258685,3.39490171550376,5.39787571063555,6.70025029767263,6.66522194480839,10.9274842800367,12.1379060961767,12.6234873099802,12.118562417969,11.1427054006702,11.569893785015,10.8486793936134,1.50791283939272,2.71952841909355,2.45882136509518,6.34654516500885,18.6238684385839,22.8562788854796,4.42624352517024,4.03953483526997,3.15508219416257,2.73307121007647,2.80050417052639,3.58453196928828,4.67877215573028,5.37845408498782,2.02405350837447,6.42962887404886,2.37172666767914,25.3843839973228,7.2389443456217,9.25941139069727,8.1443479676788,9.23832688646199,5.30980553359851,2.6705869977048,3.32555912661226,2.45186603682668,5.31543407185391,3.99665692327106,6.20227903603731,7.27067458955011,6.41695281092498,4.74055136903724,4.21674434299995,2.06271086496374,7.48967132658334,6.30213829109586,5.6917820864412,8.57348140126369,7.27094957933322,11.4156043265325,10.5311373185357,12.7875278628132,3.75474732901937,2.1183207086382,5.95426674748397,7.4198813823666,6.78150592122803,5.91066664295927,3.9392873521035,3.11867709515616,3.20628920292836,18.542530201051,2.05045056957423,7.42992724667601,3.51869602002452,2.82552685507037,2.7338845544205,1.83022538565218,3.73952545986482,3.91864066506242,4.00779924032829,2.86401185404534,3.16335993581135,5.69294507955176,5.07625101862466,4.181765920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| ||
|short_description=p2@Gpd1l | |short_description=p2@Gpd1l | ||
}} | }} |
Latest revision as of 07:10, 26 September 2015
Short description: | p2@Gpd1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpd1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000146623, NM_175380, uc009ryj.2, uc009ryk.2_5end |
EntrezGene: | Gpd1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.27e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-12 | 23 |
ectodermal cell | 6.16e-10 | 44 |
neurectodermal cell | 6.16e-10 | 44 |
neural cell | 1.16e-09 | 43 |
neuron | 1.77e-07 | 33 |
neuronal stem cell | 1.77e-07 | 33 |
neuroblast | 1.77e-07 | 33 |
electrically signaling cell | 1.77e-07 | 33 |
electrically responsive cell | 7.44e-07 | 39 |
electrically active cell | 7.44e-07 | 39 |