FFCP PHASE1:Hg19::chr11:73358690..73358736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58473 | |EntrezGene=58473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19079 | |HGNC=19079 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3M1,F5H1B8,F5H0R6,F5GXN2,F5H4T3,F5H190,F5H114 | |UniProt=F5H3M1,F5H1B8,F5H0R6,F5GXN2,F5H4T3,F5H190,F5H114 | ||
|association_with_transcript=0bp_to_ENST00000535582,ENST00000538227,ENST00000539157,ENST00000539549,ENST00000541760,ENST00000542185,ENST00000544532,ENST00000545798,ENST00000546251_5end | |association_with_transcript=0bp_to_ENST00000535582,ENST00000538227,ENST00000539157,ENST00000539549,ENST00000541760,ENST00000542185,ENST00000544532,ENST00000545798,ENST00000546251_5end | ||
|cluster_id=chr11:73358690..73358736,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PLEKHB1_5end | |description=CAGE_peak_1_at_PLEKHB1_5end | ||
|id=chr11:73358690..73358736,+ | |id=chr11:73358690..73358736,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.39e-10!53;CL:0000051!5.39e-10!53;CL:0000838!9.45e-10!52;CL:0000791!4.17e-09!18;CL:0000789!4.17e-09!18;CL:0002420!4.17e-09!18;CL:0002419!4.17e-09!18;CL:0000790!4.17e-09!18;CL:0000084!1.11e-07!25;CL:0000827!1.11e-07!25 | |ontology_enrichment_celltype=CL:0000542!5.39e-10!53;CL:0000051!5.39e-10!53;CL:0000838!9.45e-10!52;CL:0000791!4.17e-09!18;CL:0000789!4.17e-09!18;CL:0002420!4.17e-09!18;CL:0002419!4.17e-09!18;CL:0000790!4.17e-09!18;CL:0000084!1.11e-07!25;CL:0000827!1.11e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.07e-10;18!CL:0000789;2.07e-10;18!CL:0002419;2.07e-10;18!CL:0000084;7.14e-09;25!CL:0000625;2.89e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.71e-11,53;CL:0000051,3.71e-11,53;CL:0000838,7.15e-11,52;CL:0000791,1.96e-10,18;CL:0000789,1.96e-10,18;CL:0002420,1.96e-10,18;CL:0002419,1.96e-10,18;CL:0000790,1.96e-10,18;CL:0000084,7.10e-09,25;CL:0000827,7.10e-09,25;CL:0000625,2.80e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.07e-10;18!UBERON:0006601;2.38e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-49!115;UBERON:0005743!8.63e-37!86;UBERON:0001017!1.90e-34!82;UBERON:0000073!2.63e-34!94;UBERON:0001016!2.63e-34!94;UBERON:0001049!1.28e-32!57;UBERON:0005068!1.28e-32!57;UBERON:0006241!1.28e-32!57;UBERON:0007135!1.28e-32!57;UBERON:0000955!4.86e-29!69;UBERON:0006238!4.86e-29!69;UBERON:0002616!6.86e-29!59;UBERON:0003075!5.51e-28!86;UBERON:0007284!5.51e-28!86;UBERON:0002346!8.10e-27!90;UBERON:0003080!3.47e-25!42;UBERON:0002780!4.63e-25!41;UBERON:0001890!4.63e-25!41;UBERON:0006240!4.63e-25!41;UBERON:0003056!1.79e-21!61;UBERON:0002020!1.22e-20!34;UBERON:0003528!1.22e-20!34;UBERON:0001893!1.29e-20!34;UBERON:0002791!5.49e-20!33;UBERON:0001869!3.36e-19!32;UBERON:0000153!4.99e-18!129;UBERON:0007811!4.99e-18!129;UBERON:0000033!1.68e-16!123;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0002619!4.62e-14!22;UBERON:0004121!1.97e-13!169;UBERON:0000924!3.73e-13!173;UBERON:0006601!3.73e-13!173;UBERON:0001950!8.90e-13!20;UBERON:0000025!6.39e-11!194;UBERON:0004111!4.86e-09!241;UBERON:0003076!1.58e-08!15;UBERON:0003057!1.58e-08!15;UBERON:0002308!1.86e-07!9;UBERON:0000125!1.86e-07!9;UBERON:0002420!2.36e-07!9;UBERON:0007245!2.36e-07!9;UBERON:0010009!2.36e-07!9;UBERON:0010011!2.36e-07!9;UBERON:0000454!2.36e-07!9;UBERON:0004732!2.73e-07!13;UBERON:0000477!2.92e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.51e-21;41!UBERON:0001890;4.51e-21;41!UBERON:0001893;1.13e-20;34!UBERON:0003528;1.56e-20;34!UBERON:0002020;1.56e-20;34!UBERON:0000073;2.69e-20;53!UBERON:0002616;2.69e-20;53!UBERON:0002791;2.78e-20;32!UBERON:0001869;3.25e-20;32!UBERON:0000956;5.34e-17;25!UBERON:0000203;5.34e-17;25!UBERON:0002619;2.96e-16;22!UBERON:0001950;9.62e-15;20!UBERON:0001017;1.07e-14;75!UBERON:0000955;2.25e-14;68!UBERON:0007023;2.48e-14;114!UBERON:0001016;8.70e-13;83!UBERON:0000125;1.69e-08;9!UBERON:0002308;1.69e-08;9!UBERON:0002420;2.24e-08;9!UBERON:0007245;2.24e-08;9!UBERON:0010009;2.24e-08;9!UBERON:0010011;2.24e-08;9!UBERON:0000454;2.24e-08;9!UBERON:0004732;7.15e-08;13!UBERON:0004733;4.33e-07;12!UBERON:0002028;4.33e-07;12!UBERON:0009663;6.52e-07;7 | |||
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| ||
|short_description=p1@PLEKHB1 | |short_description=p1@PLEKHB1 | ||
}} | }} |
Latest revision as of 03:20, 20 September 2015
Short description: | p1@PLEKHB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHB1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000535582, ENST00000538227, ENST00000539157, ENST00000539549, ENST00000541760, ENST00000542185, ENST00000544532, ENST00000545798, ENST00000546251_5end |
EntrezGene: | PLEKHB1 |
HGNC: | 19079 |
UniProt: | F5H3M1F5H1B8F5H0R6F5GXN2F5H4T3F5H190F5H114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.71e-11 | 53 |
common lymphoid progenitor | 3.71e-11 | 53 |
lymphoid lineage restricted progenitor cell | 7.15e-11 | 52 |
mature alpha-beta T cell | 1.96e-10 | 18 |
alpha-beta T cell | 1.96e-10 | 18 |
immature T cell | 1.96e-10 | 18 |
mature T cell | 1.96e-10 | 18 |
immature alpha-beta T cell | 1.96e-10 | 18 |
T cell | 7.10e-09 | 25 |
pro-T cell | 7.10e-09 | 25 |
CD8-positive, alpha-beta T cell | 2.80e-07 | 11 |