FFCP PHASE1:Hg19::chr16:69599861..69599885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10725 | |EntrezGene=10725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7774 | |HGNC=7774 | ||
|TSSclassifier=strong | |||
|UniProt=A2RRB4,O94916,E9PHR7,Q96QH3,Q7LA65 | |UniProt=A2RRB4,O94916,E9PHR7,Q96QH3,Q7LA65 | ||
|association_with_transcript=0bp_to_NM_001113178,NM_006599,NM_138713,NM_138714,NM_173214,NM_173215_5end | |association_with_transcript=0bp_to_NM_001113178,NM_006599,NM_138713,NM_138714,NM_173214,NM_173215_5end | ||
|cluster_id=chr16:69599861..69599885,+ | |||
|description=CAGE_peak_1_at_NFAT5_5end | |description=CAGE_peak_1_at_NFAT5_5end | ||
|id=chr16:69599861..69599885,+ | |id=chr16:69599861..69599885,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-15!42;CL:0000860!1.93e-13!45;CL:0000766!7.61e-12!76;CL:0000557!7.12e-10!71;CL:0000738!7.98e-09!140;CL:0000839!1.41e-08!70;CL:0002009!3.57e-08!65;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.53e-15!42;CL:0000860!1.93e-13!45;CL:0000766!7.61e-12!76;CL:0000557!7.12e-10!71;CL:0000738!7.98e-09!140;CL:0000839!1.41e-08!70;CL:0002009!3.57e-08!65;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.40e-15;33!CL:0002057;5.40e-15;33!CL:0000473;2.77e-09;39!CL:0000234;2.77e-09;39!CL:0000576;5.18e-08;48!CL:0000766;9.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-15,42;CL:0002057,1.53e-15,42;CL:0000766,2.64e-13,72;CL:0000473,7.82e-12,48;CL:0000234,7.82e-12,48;CL:0000557,3.29e-11,67;CL:0000839,8.70e-10,66;CL:0000738,1.33e-09,136;CL:0002009,2.10e-09,61;CL:0002194,8.08e-09,59;CL:0000576,8.08e-09,59;CL:0000040,8.08e-09,59;CL:0000559,8.08e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.92e-38!115;UBERON:0001049!1.87e-19!57;UBERON:0005068!1.87e-19!57;UBERON:0006241!1.87e-19!57;UBERON:0007135!1.87e-19!57;UBERON:0002616!3.23e-18!59;UBERON:0003080!5.05e-18!42;UBERON:0002780!1.80e-17!41;UBERON:0001890!1.80e-17!41;UBERON:0006240!1.80e-17!41;UBERON:0000955!1.04e-16!69;UBERON:0006238!1.04e-16!69;UBERON:0001893!2.80e-14!34;UBERON:0001017!3.32e-14!82;UBERON:0002020!3.94e-14!34;UBERON:0003528!3.94e-14!34;UBERON:0002791!8.85e-14!33;UBERON:0001869!2.12e-13!32;UBERON:0005743!9.41e-13!86;UBERON:0003075!6.14e-12!86;UBERON:0007284!6.14e-12!86;UBERON:0000073!7.32e-12!94;UBERON:0001016!7.32e-12!94;UBERON:0002346!1.18e-11!90;UBERON:0002619!1.36e-11!22;UBERON:0000153!5.25e-11!129;UBERON:0007811!5.25e-11!129;UBERON:0001950!7.59e-11!20;UBERON:0002390!3.49e-10!102;UBERON:0003061!3.49e-10!102;UBERON:0000956!3.75e-10!25;UBERON:0000203!3.75e-10!25;UBERON:0000033!4.56e-10!123;UBERON:0002193!2.04e-09!112;UBERON:0003056!6.44e-09!61;UBERON:0000062!1.62e-08!511;UBERON:0004121!5.19e-07!169;UBERON:0000924!5.55e-07!173;UBERON:0006601!5.55e-07!173;UBERON:0002371!9.31e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.11e-13;41!UBERON:0001890;8.11e-13;41!UBERON:0001893;3.06e-12;34!UBERON:0002791;4.47e-12;32!UBERON:0003528;4.69e-12;34!UBERON:0002020;4.69e-12;34!UBERON:0001869;4.86e-12;32!UBERON:0002619;1.52e-11;22!UBERON:0000073;6.32e-11;53!UBERON:0002616;6.32e-11;53!UBERON:0001950;8.42e-11;20!UBERON:0007023;8.53e-11;114!UBERON:0000956;4.15e-10;25!UBERON:0000203;4.15e-10;25!UBERON:0001017;4.82e-08;75!UBERON:0000955;1.47e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.20e-37,114;UBERON:0001049,6.47e-19,56;UBERON:0005068,6.47e-19,56;UBERON:0006241,6.47e-19,56;UBERON:0007135,6.47e-19,56;UBERON:0000073,5.44e-18,53;UBERON:0002616,5.44e-18,53;UBERON:0002780,1.80e-17,41;UBERON:0001890,1.80e-17,41;UBERON:0003080,1.80e-17,41;UBERON:0006240,1.80e-17,41;UBERON:0000955,3.26e-16,68;UBERON:0006238,3.26e-16,68;UBERON:0001893,2.80e-14,34;UBERON:0003528,3.94e-14,34;UBERON:0002020,3.94e-14,34;UBERON:0001017,9.37e-14,81;UBERON:0001869,2.12e-13,32;UBERON:0002791,2.20e-13,32;UBERON:0001016,1.01e-12,89;UBERON:0002619,1.36e-11,22;UBERON:0002390,3.04e-11,98;UBERON:0003061,3.04e-11,98;UBERON:0001950,7.59e-11,20;UBERON:0003075,1.32e-10,82;UBERON:0007284,1.32e-10,82;UBERON:0002193,2.34e-10,108;UBERON:0002346,2.40e-10,86;UBERON:0000956,3.75e-10,25;UBERON:0000203,3.75e-10,25;UBERON:0003056,1.36e-08,61;UBERON:0002405,9.02e-08,93;UBERON:0002371,1.12e-07,76;UBERON:0001474,1.46e-07,82 | |||
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| ||
|short_description=p1@NFAT5 | |short_description=p1@NFAT5 | ||
}} | }} |
Latest revision as of 15:09, 17 September 2015
Short description: | p1@NFAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFAT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001113178, NM_006599, NM_138713, NM_138714, NM_173214, NM_173215_5end |
EntrezGene: | NFAT5 |
HGNC: | 7774 |
UniProt: | A2RRB4O94916E9PHR7Q96QH3Q7LA65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-15 | 42 |
myeloid leukocyte | 2.64e-13 | 72 |
defensive cell | 7.82e-12 | 48 |
phagocyte | 7.82e-12 | 48 |
granulocyte monocyte progenitor cell | 3.29e-11 | 67 |
myeloid lineage restricted progenitor cell | 8.70e-10 | 66 |
leukocyte | 1.33e-09 | 136 |
macrophage dendritic cell progenitor | 2.10e-09 | 61 |
monopoietic cell | 8.08e-09 | 59 |
monocyte | 8.08e-09 | 59 |
monoblast | 8.08e-09 | 59 |
promonocyte | 8.08e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.20e-37 | 114 |
neural tube | 6.47e-19 | 56 |
neural rod | 6.47e-19 | 56 |
future spinal cord | 6.47e-19 | 56 |
neural keel | 6.47e-19 | 56 |
regional part of nervous system | 5.44e-18 | 53 |
regional part of brain | 5.44e-18 | 53 |
regional part of forebrain | 1.80e-17 | 41 |
forebrain | 1.80e-17 | 41 |
anterior neural tube | 1.80e-17 | 41 |
future forebrain | 1.80e-17 | 41 |
brain | 3.26e-16 | 68 |
future brain | 3.26e-16 | 68 |
telencephalon | 2.80e-14 | 34 |
brain grey matter | 3.94e-14 | 34 |
gray matter | 3.94e-14 | 34 |
central nervous system | 9.37e-14 | 81 |
cerebral hemisphere | 2.12e-13 | 32 |
regional part of telencephalon | 2.20e-13 | 32 |
nervous system | 1.01e-12 | 89 |
regional part of cerebral cortex | 1.36e-11 | 22 |
hematopoietic system | 3.04e-11 | 98 |
blood island | 3.04e-11 | 98 |
neocortex | 7.59e-11 | 20 |
neural plate | 1.32e-10 | 82 |
presumptive neural plate | 1.32e-10 | 82 |
hemolymphoid system | 2.34e-10 | 108 |
neurectoderm | 2.40e-10 | 86 |
cerebral cortex | 3.75e-10 | 25 |
pallium | 3.75e-10 | 25 |
pre-chordal neural plate | 1.36e-08 | 61 |
immune system | 9.02e-08 | 93 |
bone marrow | 1.12e-07 | 76 |
bone element | 1.46e-07 | 82 |