FFCP PHASE1:Hg19::chr11:69457902..69457918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69457902..69457918,+ | |||
|coexpression_cluster_id=C1350 | |||
|description=CAGE_peak_at_chr11:69457902..69457918,+ | |description=CAGE_peak_at_chr11:69457902..69457918,+ | ||
|id=chr11:69457902..69457918,+ | |id=chr11:69457902..69457918,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.15e-27!180;CL:0002321!3.71e-21!248;CL:0000220!3.97e-21!246;CL:0000222!2.92e-19!119;CL:0000192!3.53e-18!42;CL:0000514!3.53e-18!42;CL:0000359!1.76e-17!32;CL:0000680!2.01e-16!57;CL:0000056!2.01e-16!57;CL:0000355!2.01e-16!57;CL:0000183!1.18e-15!59;CL:0000187!7.21e-15!54;CL:0000393!2.86e-13!60;CL:0000211!2.86e-13!60;CL:0000548!4.11e-13!679;CL:0000004!4.11e-13!679;CL:0000255!4.11e-13!679;CL:0000012!1.71e-12!682;CL:0000057!2.91e-12!75;CL:0000144!1.23e-10!625;CL:0002371!1.72e-08!591;CL:0002539!6.86e-08!10;CL:0000066!2.65e-07!254;CL:0000003!9.43e-07!722 | |ontology_enrichment_celltype=CL:0000055!1.15e-27!180;CL:0002321!3.71e-21!248;CL:0000220!3.97e-21!246;CL:0000222!2.92e-19!119;CL:0000192!3.53e-18!42;CL:0000514!3.53e-18!42;CL:0000359!1.76e-17!32;CL:0000680!2.01e-16!57;CL:0000056!2.01e-16!57;CL:0000355!2.01e-16!57;CL:0000183!1.18e-15!59;CL:0000187!7.21e-15!54;CL:0000393!2.86e-13!60;CL:0000211!2.86e-13!60;CL:0000548!4.11e-13!679;CL:0000004!4.11e-13!679;CL:0000255!4.11e-13!679;CL:0000012!1.71e-12!682;CL:0000057!2.91e-12!75;CL:0000144!1.23e-10!625;CL:0002371!1.72e-08!591;CL:0002539!6.86e-08!10;CL:0000066!2.65e-07!254;CL:0000003!9.43e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-24;32!CL:0000192;1.65e-17;43!CL:0002539;3.64e-12;10!CL:0000187;2.97e-09;55!CL:0002334;2.06e-07;12!CL:1000497;2.62e-07;17!CL:0002518;2.62e-07;17!CL:0002595;3.43e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.30e-25,32;CL:0000192,3.13e-23,43;CL:0000514,3.13e-23,43;CL:0000222,5.92e-21,121;CL:0000680,5.64e-20,58;CL:0000056,5.64e-20,58;CL:0000355,5.64e-20,58;CL:0000187,1.29e-17,55;CL:0000393,1.28e-15,61;CL:0000211,1.28e-15,61;CL:0002321,8.74e-13,250;CL:0002539,4.28e-12,10;CL:0000048,2.82e-08,427;CL:0002334,6.66e-08,12;CL:0000723,9.33e-08,433;CL:0000057,1.90e-07,76;CL:0002595,2.84e-07,5;CL:1000497,4.20e-07,17;CL:0002518,4.20e-07,17;CL:0000034,4.24e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.65e-17;43!CL:0000355;1.97e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!6.49e-07!14 | |ontology_enrichment_disease=DOID:2394!6.49e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.72e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.73e-20!69;UBERON:0005256!1.23e-19!143;UBERON:0002049!6.49e-19!79;UBERON:0007798!6.49e-19!79;UBERON:0002100!2.35e-18!216;UBERON:0001637!4.23e-18!42;UBERON:0003509!4.23e-18!42;UBERON:0004572!4.23e-18!42;UBERON:0001981!8.53e-18!60;UBERON:0007500!8.53e-18!60;UBERON:0004537!8.53e-18!60;UBERON:0006965!8.53e-18!60;UBERON:0004290!5.62e-17!70;UBERON:0003914!1.19e-16!118;UBERON:0000914!2.06e-16!83;UBERON:0002329!2.06e-16!83;UBERON:0003077!2.06e-16!83;UBERON:0003059!2.06e-16!83;UBERON:0007282!2.06e-16!83;UBERON:0009618!2.06e-16!83;UBERON:0007285!2.06e-16!83;UBERON:0004573!2.02e-15!33;UBERON:0004571!2.02e-15!33;UBERON:0004872!8.61e-14!84;UBERON:0001134!8.84e-14!61;UBERON:0002036!8.84e-14!61;UBERON:0003082!8.84e-14!61;UBERON:0000490!1.37e-13!138;UBERON:0000486!3.97e-13!82;UBERON:0002385!5.68e-13!63;UBERON:0001015!5.68e-13!63;UBERON:0000383!5.68e-13!63;UBERON:0000475!3.74e-12!365;UBERON:0003104!1.15e-11!238;UBERON:0009142!1.15e-11!238;UBERON:0004535!2.56e-11!110;UBERON:0001009!2.89e-10!113;UBERON:0003102!1.87e-08!95;UBERON:0000468!2.56e-08!659;UBERON:0000947!2.73e-08!21;UBERON:0010191!2.73e-08!21;UBERON:0004237!6.86e-08!10;UBERON:0004695!6.86e-08!10;UBERON:0002111!6.86e-08!10;UBERON:0004178!6.86e-08!10;UBERON:0000483!7.97e-08!309;UBERON:0000119!8.33e-08!312;UBERON:0004111!1.29e-07!241;UBERON:0000481!3.18e-07!347;UBERON:0000477!5.03e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-16;33!UBERON:0004571;1.37e-16;33!UBERON:0001637;2.63e-15;42!UBERON:0003509;2.63e-15;42!UBERON:0004572;2.63e-15;42!UBERON:0004237;3.64e-12;10!UBERON:0004695;3.64e-12;10!UBERON:0002111;3.64e-12;10!UBERON:0004178;3.64e-12;10!UBERON:0007500;8.14e-12;56!UBERON:0001981;8.14e-12;56!UBERON:0004537;8.14e-12;56!UBERON:0003914;3.65e-11;74!UBERON:0000055;1.09e-10;65!UBERON:0002049;6.69e-09;75!UBERON:0007798;6.69e-09;75!UBERON:0000947;7.00e-09;21!UBERON:0010191;7.00e-09;21!UBERON:0003513;8.05e-09;7!UBERON:0003834;3.43e-07;5!UBERON:0001533;3.43e-07;5!UBERON:0001135;4.46e-07;15 | |||
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| ||
|short_description=p@chr11:69457902..69457918,+ | |short_description=p@chr11:69457902..69457918,+ | ||
}} | }} |
Latest revision as of 01:57, 24 July 2015
Short description: | p@chr11:69457902..69457918, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69457902..69457918, + |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.30e-25 | 32 |
smooth muscle cell | 3.13e-23 | 43 |
smooth muscle myoblast | 3.13e-23 | 43 |
mesodermal cell | 5.92e-21 | 121 |
muscle precursor cell | 5.64e-20 | 58 |
myoblast | 5.64e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-20 | 58 |
muscle cell | 1.29e-17 | 55 |
electrically responsive cell | 1.28e-15 | 61 |
electrically active cell | 1.28e-15 | 61 |
embryonic cell | 8.74e-13 | 250 |
aortic smooth muscle cell | 4.28e-12 | 10 |
multi fate stem cell | 2.82e-08 | 427 |
preadipocyte | 6.66e-08 | 12 |
somatic stem cell | 9.33e-08 | 433 |
fibroblast | 1.90e-07 | 76 |
smooth muscle cell of the subclavian artery | 2.84e-07 | 5 |
kidney cell | 4.20e-07 | 17 |
kidney epithelial cell | 4.20e-07 | 17 |
stem cell | 4.24e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.80e-07 | 14 |