FFCP PHASE1:Hg19::chr10:3821390..3821446,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:3821390..3821446,-
|short_description=p@chr10:3821390..3821446,-
|description=CAGE_peak_at_chr10:3821390..3821446,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3821390..3821446,- | |||
|coexpression_cluster_id=C721 | |||
|description=CAGE_peak_at_chr10:3821390..3821446,- | |||
|id=chr10:3821390..3821446,- | |||
|ontology_enrichment_celltype=CL:0002057!1.38e-20!42;CL:0000860!6.24e-18!45;CL:0000766!6.58e-17!76;CL:0002009!6.24e-16!65;CL:0000557!1.15e-15!71;CL:0002194!4.57e-15!63;CL:0000576!4.57e-15!63;CL:0000040!4.57e-15!63;CL:0000559!4.57e-15!63;CL:0000839!1.21e-14!70;CL:0000738!9.52e-12!140;CL:0002087!1.82e-09!119;CL:0002031!2.40e-09!124;CL:0000763!2.65e-07!112;CL:0000049!2.65e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.87e-26;33!CL:0002057;4.87e-26;33!CL:0000473;1.58e-22;39!CL:0000234;1.58e-22;39!CL:0000576;1.60e-17;48!CL:0000766;1.95e-16;69!CL:0000738;1.64e-08;136!CL:0002087;1.86e-08;104!CL:0000763;3.18e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.60e-32,48;CL:0000234,9.60e-32,48;CL:0000766,1.27e-31,72;CL:0000860,1.08e-30,42;CL:0002057,1.08e-30,42;CL:0000738,4.05e-30,136;CL:0000557,3.53e-29,67;CL:0002009,7.20e-28,61;CL:0000839,1.10e-26,66;CL:0002194,5.69e-26,59;CL:0000576,5.69e-26,59;CL:0000040,5.69e-26,59;CL:0000559,5.69e-26,59;CL:0002031,2.11e-23,120;CL:0002087,8.91e-23,115;CL:0000037,1.22e-20,168;CL:0000763,1.37e-20,108;CL:0000049,1.37e-20,108;CL:0002032,1.68e-19,161;CL:0000837,1.68e-19,161;CL:0000988,1.26e-18,177;CL:0000134,1.63e-07,354;CL:0002320,5.24e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.48e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.16e-13!80;UBERON:0001474!6.27e-12!86;UBERON:0004765!1.62e-11!101;UBERON:0001434!1.62e-11!101;UBERON:0002390!3.05e-11!102;UBERON:0003061!3.05e-11!102;UBERON:0002193!3.25e-11!112;UBERON:0002405!1.26e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.82e-24,76;UBERON:0001474,1.22e-22,82;UBERON:0002390,1.73e-22,98;UBERON:0003061,1.73e-22,98;UBERON:0004765,1.64e-20,90;UBERON:0001434,4.09e-19,100;UBERON:0002193,4.65e-19,108;UBERON:0002405,2.26e-17,93;UBERON:0003081,4.88e-11,203;UBERON:0002204,2.44e-09,167;UBERON:0002384,4.50e-07,371 | |||
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| ||
|short_description=p@chr10:3821390..3821446,- | |||
}} | }} |
Latest revision as of 13:30, 23 July 2015
Short description: | p@chr10:3821390..3821446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3821390..3821446, - |
Coexpression cluster: | C721_CD4_CD14_Neutrophils_Natural_CD8_CD19_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.60e-32 | 48 |
phagocyte | 9.60e-32 | 48 |
myeloid leukocyte | 1.27e-31 | 72 |
classical monocyte | 1.08e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-30 | 42 |
leukocyte | 4.05e-30 | 136 |
granulocyte monocyte progenitor cell | 3.53e-29 | 67 |
macrophage dendritic cell progenitor | 7.20e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.10e-26 | 66 |
monopoietic cell | 5.69e-26 | 59 |
monocyte | 5.69e-26 | 59 |
monoblast | 5.69e-26 | 59 |
promonocyte | 5.69e-26 | 59 |
hematopoietic lineage restricted progenitor cell | 2.11e-23 | 120 |
nongranular leukocyte | 8.91e-23 | 115 |
hematopoietic stem cell | 1.22e-20 | 168 |
myeloid cell | 1.37e-20 | 108 |
common myeloid progenitor | 1.37e-20 | 108 |
hematopoietic oligopotent progenitor cell | 1.68e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-19 | 161 |
hematopoietic cell | 1.26e-18 | 177 |
mesenchymal cell | 1.63e-07 | 354 |
connective tissue cell | 5.24e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.82e-24 | 76 |
bone element | 1.22e-22 | 82 |
hematopoietic system | 1.73e-22 | 98 |
blood island | 1.73e-22 | 98 |
skeletal element | 1.64e-20 | 90 |
skeletal system | 4.09e-19 | 100 |
hemolymphoid system | 4.65e-19 | 108 |
immune system | 2.26e-17 | 93 |
lateral plate mesoderm | 4.88e-11 | 203 |
musculoskeletal system | 2.44e-09 | 167 |
connective tissue | 4.50e-07 | 371 |