FFCP PHASE1:Mm9::chr9:103014205..103014222,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270192 | |EntrezGene=270192 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P61294,Q0PD53,Q0PD54 | |UniProt=P61294,Q0PD53,Q0PD54 | ||
|association_with_transcript=-181bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | |association_with_transcript=-181bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | ||
|cluster_id=chr9:103014205..103014222,+ | |||
|description=CAGE_peak_4_at_Rab6b_5end | |description=CAGE_peak_4_at_Rab6b_5end | ||
|id=chr9:103014205..103014222,+ | |id=chr9:103014205..103014222,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.69e-11!33;CL:0000047!1.69e-11!33;CL:0000031!1.69e-11!33;CL:0000404!1.69e-11!33;CL:0000117!4.12e-11!23;CL:0000337!4.12e-11!23;CL:0000393!2.46e-08!39;CL:0000211!2.46e-08!39;CL:0000221!1.04e-07!44;CL:0000133!1.04e-07!44;CL:0002319!1.36e-07!43 | |ontology_enrichment_celltype=CL:0000540!1.69e-11!33;CL:0000047!1.69e-11!33;CL:0000031!1.69e-11!33;CL:0000404!1.69e-11!33;CL:0000117!4.12e-11!23;CL:0000337!4.12e-11!23;CL:0000393!2.46e-08!39;CL:0000211!2.46e-08!39;CL:0000221!1.04e-07!44;CL:0000133!1.04e-07!44;CL:0002319!1.36e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0000540,3.14e-11,33;CL:0000047,3.14e-11,33;CL:0000031,3.14e-11,33;CL:0000404,3.14e-11,33;CL:0000393,3.47e-08,39;CL:0000211,3.47e-08,39;CL:0002319,2.30e-07,43;CL:0000221,5.15e-07,44;CL:0000133,5.15e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.25e-22!102;UBERON:0000924!1.25e-22!102;UBERON:0006601!1.25e-22!102;UBERON:0000073!2.01e-21!75;UBERON:0001016!2.01e-21!75;UBERON:0002346!2.22e-21!71;UBERON:0003075!2.22e-21!71;UBERON:0007284!2.22e-21!71;UBERON:0001017!6.15e-21!73;UBERON:0005743!6.15e-21!73;UBERON:0000033!1.57e-17!63;UBERON:0001049!2.84e-17!52;UBERON:0005068!2.84e-17!52;UBERON:0006241!2.84e-17!52;UBERON:0007135!2.84e-17!52;UBERON:0000955!2.53e-16!50;UBERON:0006238!2.53e-16!50;UBERON:0003056!8.24e-16!49;UBERON:0002616!9.12e-16!49;UBERON:0002020!9.35e-15!34;UBERON:0003080!3.16e-13!40;UBERON:0002780!1.12e-12!39;UBERON:0001890!1.12e-12!39;UBERON:0006240!1.12e-12!39;UBERON:0002791!8.18e-12!29;UBERON:0003528!8.18e-12!29;UBERON:0001893!8.18e-12!29;UBERON:0007811!1.14e-11!86;UBERON:0000153!1.09e-09!94;UBERON:0002021!3.16e-08!10;UBERON:0000411!3.16e-08!10;UBERON:0001950!3.16e-08!10;UBERON:0000956!1.18e-07!21;UBERON:0001869!1.18e-07!21;UBERON:0000203!1.18e-07!21;UBERON:0002619!2.91e-07!17 | |ontology_enrichment_uberon=UBERON:0004121!1.25e-22!102;UBERON:0000924!1.25e-22!102;UBERON:0006601!1.25e-22!102;UBERON:0000073!2.01e-21!75;UBERON:0001016!2.01e-21!75;UBERON:0002346!2.22e-21!71;UBERON:0003075!2.22e-21!71;UBERON:0007284!2.22e-21!71;UBERON:0001017!6.15e-21!73;UBERON:0005743!6.15e-21!73;UBERON:0000033!1.57e-17!63;UBERON:0001049!2.84e-17!52;UBERON:0005068!2.84e-17!52;UBERON:0006241!2.84e-17!52;UBERON:0007135!2.84e-17!52;UBERON:0000955!2.53e-16!50;UBERON:0006238!2.53e-16!50;UBERON:0003056!8.24e-16!49;UBERON:0002616!9.12e-16!49;UBERON:0002020!9.35e-15!34;UBERON:0003080!3.16e-13!40;UBERON:0002780!1.12e-12!39;UBERON:0001890!1.12e-12!39;UBERON:0006240!1.12e-12!39;UBERON:0002791!8.18e-12!29;UBERON:0003528!8.18e-12!29;UBERON:0001893!8.18e-12!29;UBERON:0007811!1.14e-11!86;UBERON:0000153!1.09e-09!94;UBERON:0002021!3.16e-08!10;UBERON:0000411!3.16e-08!10;UBERON:0001950!3.16e-08!10;UBERON:0000956!1.18e-07!21;UBERON:0001869!1.18e-07!21;UBERON:0000203!1.18e-07!21;UBERON:0002619!2.91e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.02e-23,64;UBERON:0003075,5.02e-23,64;UBERON:0007284,5.02e-23,64;UBERON:0001017,1.50e-22,73;UBERON:0001016,1.96e-22,75;UBERON:0000073,5.44e-22,54;UBERON:0004121,1.44e-21,95;UBERON:0000924,1.44e-21,95;UBERON:0006601,1.44e-21,95;UBERON:0001049,5.41e-20,52;UBERON:0005068,5.41e-20,52;UBERON:0006241,5.41e-20,52;UBERON:0007135,5.41e-20,52;UBERON:0002020,1.05e-18,34;UBERON:0010371,1.11e-18,73;UBERON:0003056,3.55e-16,49;UBERON:0000955,4.87e-16,47;UBERON:0006238,4.87e-16,47;UBERON:0002616,2.49e-15,46;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0003080,1.02e-13,40;UBERON:0002780,5.21e-13,39;UBERON:0001890,5.21e-13,39;UBERON:0006240,5.21e-13,39;UBERON:0010314,9.59e-13,92;UBERON:0002021,6.95e-11,10;UBERON:0000411,6.95e-11,10;UBERON:0001950,6.95e-11,10;UBERON:0002619,1.38e-09,17;UBERON:0000956,5.51e-09,21;UBERON:0001869,5.51e-09,21;UBERON:0000203,5.51e-09,21;UBERON:0002420,2.57e-07,8;UBERON:0007245,2.57e-07,8;UBERON:0010009,2.57e-07,8;UBERON:0010011,2.57e-07,8;UBERON:0000454,2.57e-07,8;UBERON:0003076,3.42e-07,12;UBERON:0003057,3.42e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,1.12630977721333,0,0.34243593645101,0,0.342401459862411,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0,0,0,7.68802551266472,12.6957835025288,17.1134478946668,0,0,0,0,0,0.898800331555214,0.384218305321555,0.622137673850866,1.08004750665353,0.420649922702764,33.1355141908412,29.3755159465646,1.34739879136449,0.862609239164127,3.67687514644008,48.450987639731,55.0332427147159,52.5334343736353,6.98997324970027,8.87430142943374,8.85552729946492,38.5272538621906,15.757353080887,28.1148775909331,30.9360014747351,22.4947255662583,13.047961207771,0.984440513331393,1.73814588245607,0.289864488701678,0,0,0,0,0,1.26399978118577,0.511290967734173,1.29893002301434,1.06001872353102,0.985903938436763,3.84979432242953,10.1922095882658,14.2213340630666,0.216491041011214,0,0,0.79928715803342,0.776813650941515,0.445326417194474,0.520455980298408,2.13125834818499,0.922461989024234,1.3565037649736,2.11659672844269,0.502666365318702,1.73036477414062,1.15679485535929,0,0,0,0.484875253135222,0,19.6163133997737,14.4518227701284,0.255457055208591,0.11981512450592,0,0,21.8694333531041,34.312545211397,3.64397621127307,42.2393098067232,28.3844157636667,45.9211578476628,23.6872244078926,0.509196819251581,0,2.52722758433675,2.10441855886474,0.390361328888111,0.689706313300419,2.52086981727489,3.46621081022145,2.58538696775046,2.8185018462667,1.40552586839593,5.17406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,23.7627641877464,2.36680608472354,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,1.20149420536089,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0,0.585400943573396,0,0,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0,0.551873492609465,28.578005017827,20.74646852682,0,0,0.315508219416257,1.56175497718655,2.80050417052639,0.477937595905104,0.222798674082394,0.566153061577665,1.21443210502468,2.92255857911312,2.76701444562566,19.6006003017302,0.709700426041343,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,3.06395645178409,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,1.81003922662333,0.608929898229199,2.11204537257339,3.60114520468494,1.32317038832977,1.15420377059036,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,29.2971977176605,0.512612642393558,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.578574190077352,1.04702376793612,0.388844919875379,0,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,1.15345278868282,0.241584120826006,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.481059208201647,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.503653849092235,0.579568782096571,0.375364950902364,1.28206136987086,0.214368379079066,2.00628841614145,38.9678771405776,45.1118731777033,42.3942679945154,56.8834033557606,37.6795385873853,61.9422995859554,46.5765525159946,35.5753750547134,35.7982503097522,48.1517089929193,0.415149390336707,1.99512436700516,0.853668028770671,0.729320151204882,2.51535795153579,3.67687016900028,2.22246727801615,1.64828045791115,0.962757628775446,2.27427490587418,2.78827229879264,2.26351609663291,1.96647165686753,1.98477972455095,1.60819313075717,0.952587382566147,2.31768651889711,1.15745532278223,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,1.90748951957857,1.88950341622027,1.97629698872194,1.35383372626682,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,0.830445126869219,1.37906275325789,1.63692417267876,1.54936841185966,1.35034627686799,2.99772693525535,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,1.15933917810211 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,1.12630977721333,0,0.34243593645101,0,0.342401459862411,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0,0,0,7.68802551266472,12.6957835025288,17.1134478946668,0,0,0,0,0,0.898800331555214,0.384218305321555,0.622137673850866,1.08004750665353,0.420649922702764,33.1355141908412,29.3755159465646,1.34739879136449,0.862609239164127,3.67687514644008,48.450987639731,55.0332427147159,52.5334343736353,6.98997324970027,8.87430142943374,8.85552729946492,38.5272538621906,15.757353080887,28.1148775909331,30.9360014747351,22.4947255662583,13.047961207771,0.984440513331393,1.73814588245607,0.289864488701678,0,0,0,0,0,1.26399978118577,0.511290967734173,1.29893002301434,1.06001872353102,0.985903938436763,3.84979432242953,10.1922095882658,14.2213340630666,0.216491041011214,0,0,0.79928715803342,0.776813650941515,0.445326417194474,0.520455980298408,2.13125834818499,0.922461989024234,1.3565037649736,2.11659672844269,0.502666365318702,1.73036477414062,1.15679485535929,0,0,0,0.484875253135222,0,19.6163133997737,14.4518227701284,0.255457055208591,0.11981512450592,0,0,21.8694333531041,34.312545211397,3.64397621127307,42.2393098067232,28.3844157636667,45.9211578476628,23.6872244078926,0.509196819251581,0,2.52722758433675,2.10441855886474,0.390361328888111,0.689706313300419,2.52086981727489,3.46621081022145,2.58538696775046,2.8185018462667,1.40552586839593,5.17406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,23.7627641877464,2.36680608472354,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,1.20149420536089,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0,0.585400943573396,0,0,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0,0.551873492609465,28.578005017827,20.74646852682,0,0,0.315508219416257,1.56175497718655,2.80050417052639,0.477937595905104,0.222798674082394,0.566153061577665,1.21443210502468,2.92255857911312,2.76701444562566,19.6006003017302,0.709700426041343,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,3.06395645178409,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,1.81003922662333,0.608929898229199,2.11204537257339,3.60114520468494,1.32317038832977,1.15420377059036,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,29.2971977176605,0.512612642393558,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.578574190077352,1.04702376793612,0.388844919875379,0,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,1.15345278868282,0.241584120826006,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.481059208201647,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.503653849092235,0.579568782096571,0.375364950902364,1.28206136987086,0.214368379079066,2.00628841614145,38.9678771405776,45.1118731777033,42.3942679945154,56.8834033557606,37.6795385873853,61.9422995859554,46.5765525159946,35.5753750547134,35.7982503097522,48.1517089929193,0.415149390336707,1.99512436700516,0.853668028770671,0.729320151204882,2.51535795153579,3.67687016900028,2.22246727801615,1.64828045791115,0.962757628775446,2.27427490587418,2.78827229879264,2.26351609663291,1.96647165686753,1.98477972455095,1.60819313075717,0.952587382566147,2.31768651889711,1.15745532278223,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,1.90748951957857,1.88950341622027,1.97629698872194,1.35383372626682,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,0.830445126869219,1.37906275325789,1.63692417267876,1.54936841185966,1.35034627686799,2.99772693525535,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,1.15933917810211 | ||
|short_description=p4@Rab6b | |short_description=p4@Rab6b | ||
}} | }} |
Latest revision as of 01:44, 26 September 2015
Short description: | p4@Rab6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rab6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -181bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end |
EntrezGene: | Rab6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-12 | 23 |
neuron | 3.14e-11 | 33 |
neuronal stem cell | 3.14e-11 | 33 |
neuroblast | 3.14e-11 | 33 |
electrically signaling cell | 3.14e-11 | 33 |
electrically responsive cell | 3.47e-08 | 39 |
electrically active cell | 3.47e-08 | 39 |
neural cell | 2.30e-07 | 43 |
ectodermal cell | 5.15e-07 | 44 |
neurectodermal cell | 5.15e-07 | 44 |