FFCP PHASE1:Hg19::chr10:35415761..35415800,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:35415761..35415800,+
|short_description=p7@CREM
|description=CAGE_peak_7_at_CREM_5end
|association_with_transcript=0bp_to_ENST00000482646,ENST00000496626,...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1390 | |EntrezGene=1390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2352 | |HGNC=2352 | ||
|UniProt=Q96AG7, | |TSSclassifier=strong | ||
|UniProt=Q96AG7,E9PB41,E9PAR2,Q14501,Q5W1B0 | |||
|association_with_transcript=0bp_to_ENST00000482646,ENST00000496626,NM_001881,NM_182850,NM_182853,NM_183013,uc001ixx.2,uc001ixy.2,uc001ixz.2,uc001iya.2_5end | |||
|cluster_id=chr10:35415761..35415800,+ | |||
|description=CAGE_peak_7_at_CREM_5end | |||
|id=chr10:35415761..35415800,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.79e-20!42;CL:0000860!5.06e-18!45;CL:0002087!2.04e-17!119;CL:0000738!4.53e-16!140;CL:0002194!8.40e-16!63;CL:0000576!8.40e-16!63;CL:0000040!8.40e-16!63;CL:0000559!8.40e-16!63;CL:0002009!1.21e-15!65;CL:0002031!4.39e-15!124;CL:0000766!9.90e-14!76;CL:0000839!6.37e-13!70;CL:0000557!7.10e-13!71;CL:0002032!1.95e-07!165;CL:0000837!1.95e-07!165;CL:0000037!9.24e-07!172;CL:0000566!9.24e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.08e-18;33!CL:0002057;3.08e-18;33!CL:0000473;1.87e-15;39!CL:0000234;1.87e-15;39!CL:0000576;5.10e-12;48!CL:0000766;1.75e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.40e-21,48;CL:0000234,2.40e-21,48;CL:0000860,1.29e-20,42;CL:0002057,1.29e-20,42;CL:0002087,1.09e-18,115;CL:0002194,6.03e-18,59;CL:0000576,6.03e-18,59;CL:0000040,6.03e-18,59;CL:0000559,6.03e-18,59;CL:0002009,1.26e-17,61;CL:0000738,3.99e-17,136;CL:0002031,4.50e-16,120;CL:0000766,1.14e-15,72;CL:0000557,1.23e-14,67;CL:0000839,1.44e-14,66;CL:0002032,3.29e-08,161;CL:0000837,3.29e-08,161;CL:0000037,2.67e-07,168;CL:0000988,7.10e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.62e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.37e-13,108;UBERON:0002405,6.23e-13,93;UBERON:0002390,6.15e-12,98;UBERON:0003061,6.15e-12,98;UBERON:0002371,5.74e-11,76;UBERON:0001474,1.06e-10,82;UBERON:0004765,2.24e-10,90;UBERON:0003081,1.75e-08,203;UBERON:0001434,2.85e-08,100;UBERON:0007023,3.64e-07,114 | |||
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| ||
|short_description=p7@CREM | |||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p7@CREM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CREM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482646, ENST00000496626, NM_001881, NM_182850, NM_182853, NM_183013, uc001ixx.2, uc001ixy.2, uc001ixz.2, uc001iya.2_5end |
EntrezGene: | CREM |
HGNC: | 2352 |
UniProt: | Q96AG7E9PB41E9PAR2Q14501Q5W1B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.40e-21 | 48 |
phagocyte | 2.40e-21 | 48 |
classical monocyte | 1.29e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-20 | 42 |
nongranular leukocyte | 1.09e-18 | 115 |
monopoietic cell | 6.03e-18 | 59 |
monocyte | 6.03e-18 | 59 |
monoblast | 6.03e-18 | 59 |
promonocyte | 6.03e-18 | 59 |
macrophage dendritic cell progenitor | 1.26e-17 | 61 |
leukocyte | 3.99e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 4.50e-16 | 120 |
myeloid leukocyte | 1.14e-15 | 72 |
granulocyte monocyte progenitor cell | 1.23e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.44e-14 | 66 |
hematopoietic oligopotent progenitor cell | 3.29e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.29e-08 | 161 |
hematopoietic stem cell | 2.67e-07 | 168 |
hematopoietic cell | 7.10e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.37e-13 | 108 |
immune system | 6.23e-13 | 93 |
hematopoietic system | 6.15e-12 | 98 |
blood island | 6.15e-12 | 98 |
bone marrow | 5.74e-11 | 76 |
bone element | 1.06e-10 | 82 |
skeletal element | 2.24e-10 | 90 |
lateral plate mesoderm | 1.75e-08 | 203 |
skeletal system | 2.85e-08 | 100 |
adult organism | 3.64e-07 | 114 |