FFCP PHASE1:Hg19::chr11:66139926..66139937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3177 | |EntrezGene=3177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11004 | |HGNC=11004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_ENST00000546034_5end | |association_with_transcript=-241bp_to_ENST00000546034_5end | ||
|cluster_id=chr11:66139926..66139937,- | |||
|description=CAGE_peak_11_at_SLC29A2_5end | |description=CAGE_peak_11_at_SLC29A2_5end | ||
|id=chr11:66139926..66139937,- | |id=chr11:66139926..66139937,- | ||
|ontology_enrichment_celltype=CL:0000838!2.95e-15!52;CL:0000542!8.54e-15!53;CL:0000051!8.54e-15!53;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | |ontology_enrichment_celltype=CL:0000838!2.95e-15!52;CL:0000542!8.54e-15!53;CL:0000051!8.54e-15!53;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.13e-13,4;CL:0002222,1.13e-13,4;CL:0002224,1.13e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3 | |||
|ontology_enrichment_disease=DOID:0060058!4.62e-08!10 | |ontology_enrichment_disease=DOID:0060058!4.62e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-17!115;UBERON:0001049!5.48e-16!57;UBERON:0005068!5.48e-16!57;UBERON:0006241!5.48e-16!57;UBERON:0007135!5.48e-16!57;UBERON:0002616!5.52e-14!59;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0002346!3.97e-12!90;UBERON:0000955!2.82e-11!69;UBERON:0006238!2.82e-11!69;UBERON:0002780!4.36e-11!41;UBERON:0001890!4.36e-11!41;UBERON:0006240!4.36e-11!41;UBERON:0003080!1.13e-10!42;UBERON:0001017!2.50e-10!82;UBERON:0005743!2.02e-09!86;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0000073!6.33e-09!94;UBERON:0001016!6.33e-09!94;UBERON:0001893!8.28e-09!34;UBERON:0002619!1.90e-08!22;UBERON:0002791!3.52e-08!33;UBERON:0000956!3.74e-08!25;UBERON:0000203!3.74e-08!25;UBERON:0001950!6.19e-08!20;UBERON:0001869!2.07e-07!32;UBERON:0004733!2.48e-07!12;UBERON:0002028!2.48e-07!12;UBERON:0007277!2.48e-07!12;UBERON:0003056!5.11e-07!61;UBERON:0003076!7.85e-07!15;UBERON:0003057!7.85e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.90e-17!115;UBERON:0001049!5.48e-16!57;UBERON:0005068!5.48e-16!57;UBERON:0006241!5.48e-16!57;UBERON:0007135!5.48e-16!57;UBERON:0002616!5.52e-14!59;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0002346!3.97e-12!90;UBERON:0000955!2.82e-11!69;UBERON:0006238!2.82e-11!69;UBERON:0002780!4.36e-11!41;UBERON:0001890!4.36e-11!41;UBERON:0006240!4.36e-11!41;UBERON:0003080!1.13e-10!42;UBERON:0001017!2.50e-10!82;UBERON:0005743!2.02e-09!86;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0000073!6.33e-09!94;UBERON:0001016!6.33e-09!94;UBERON:0001893!8.28e-09!34;UBERON:0002619!1.90e-08!22;UBERON:0002791!3.52e-08!33;UBERON:0000956!3.74e-08!25;UBERON:0000203!3.74e-08!25;UBERON:0001950!6.19e-08!20;UBERON:0001869!2.07e-07!32;UBERON:0004733!2.48e-07!12;UBERON:0002028!2.48e-07!12;UBERON:0007277!2.48e-07!12;UBERON:0003056!5.11e-07!61;UBERON:0003076!7.85e-07!15;UBERON:0003057!7.85e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.31e-74,6;UBERON:0006215,3.31e-74,6;UBERON:0002680,6.62e-50,9;UBERON:0001895,6.62e-50,9;UBERON:0010092,6.62e-50,9;UBERON:0004733,9.76e-38,12;UBERON:0002028,9.76e-38,12;UBERON:0007277,9.76e-38,12;UBERON:0004732,6.32e-35,13;UBERON:0003076,2.01e-30,15;UBERON:0003057,2.01e-30,15;UBERON:0010077,1.13e-13,4;UBERON:0005389,1.13e-13,4;UBERON:0000484,1.13e-13,4;UBERON:0002546,1.13e-13,4;UBERON:0000965,1.13e-13,4;UBERON:0001803,1.13e-13,4;UBERON:0003073,1.13e-13,4;UBERON:0005426,1.13e-13,4;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0010371,2.22e-08,104;UBERON:0000076,1.69e-07,8;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p11@SLC29A2 | |short_description=p11@SLC29A2 | ||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p11@SLC29A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC29A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_ENST00000546034_5end |
EntrezGene: | SLC29A2 |
HGNC: | 11004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.13e-13 | 4 |
vertebrate lens cell | 1.13e-13 | 4 |
lens epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.31e-74 | 6 |
rhombic lip | 3.31e-74 | 6 |
regional part of metencephalon | 6.62e-50 | 9 |
metencephalon | 6.62e-50 | 9 |
future metencephalon | 6.62e-50 | 9 |
segmental subdivision of hindbrain | 9.76e-38 | 12 |
hindbrain | 9.76e-38 | 12 |
presumptive hindbrain | 9.76e-38 | 12 |
segmental subdivision of nervous system | 6.32e-35 | 13 |
posterior neural tube | 2.01e-30 | 15 |
chordal neural plate | 2.01e-30 | 15 |
cuboidal epithelium | 1.13e-13 | 4 |
transparent eye structure | 1.13e-13 | 4 |
simple cuboidal epithelium | 1.13e-13 | 4 |
cranial placode | 1.13e-13 | 4 |
lens of camera-type eye | 1.13e-13 | 4 |
epithelium of lens | 1.13e-13 | 4 |
lens placode | 1.13e-13 | 4 |
lens vesicle | 1.13e-13 | 4 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
ecto-epithelium | 2.22e-08 | 104 |
external ectoderm | 1.69e-07 | 8 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |