FFCP PHASE1:Hg19::chr10:32667660..32667735,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:32667660..32667735,-
|short_description=p2@EPC1
|description=CAGE_peak_2_at_EPC1_5end
|association_with_transcript=0bp_to_ENST00000375110,uc001iwi.3,uc009...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80314 | |EntrezGene=80314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19876 | |HGNC=19876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000375110,uc001iwi.3,uc009xlt.2_5end | |||
|cluster_id=chr10:32667660..32667735,- | |||
|coexpression_cluster_id=C1115 | |||
|description=CAGE_peak_2_at_EPC1_5end | |||
|id=chr10:32667660..32667735,- | |||
|ontology_enrichment_celltype=CL:0000037!2.57e-22!172;CL:0000566!2.57e-22!172;CL:0000988!4.18e-22!182;CL:0000738!4.99e-22!140;CL:0002032!2.94e-19!165;CL:0000837!2.94e-19!165;CL:0000542!4.19e-18!53;CL:0000051!4.19e-18!53;CL:0000838!4.79e-18!52;CL:0002031!2.11e-17!124;CL:0002087!4.65e-16!119;CL:0000791!2.34e-11!18;CL:0000789!2.34e-11!18;CL:0002420!2.34e-11!18;CL:0002419!2.34e-11!18;CL:0000790!2.34e-11!18;CL:0000084!1.65e-10!25;CL:0000827!1.65e-10!25;CL:0000625!2.30e-08!11;CL:0000236!1.57e-07!14;CL:0000945!2.68e-07!24;CL:0000826!2.68e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.19e-11;18!CL:0000789;2.19e-11;18!CL:0002419;2.19e-11;18!CL:0000542;2.75e-11;53!CL:0000084;2.06e-10;25!CL:0000625;2.18e-08;11!CL:0000236;1.25e-07;13!CL:0000945;2.21e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.62e-23,177;CL:0000037,1.99e-23,168;CL:0000738,2.60e-23,136;CL:0002032,2.74e-20,161;CL:0000837,2.74e-20,161;CL:0002031,1.39e-18,120;CL:0000542,4.14e-18,53;CL:0000051,4.14e-18,53;CL:0000838,4.74e-18,52;CL:0002087,3.33e-17,115;CL:0000791,2.32e-11,18;CL:0000789,2.32e-11,18;CL:0002420,2.32e-11,18;CL:0002419,2.32e-11,18;CL:0000790,2.32e-11,18;CL:0000084,1.64e-10,25;CL:0000827,1.64e-10,25;CL:0000625,2.29e-08,11;CL:0000236,1.56e-07,14;CL:0000945,2.67e-07,24;CL:0000826,2.67e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.19e-11;18!CL:0000051;2.75e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-19!115;UBERON:0001017!5.66e-12!82;UBERON:0001049!3.44e-11!57;UBERON:0005068!3.44e-11!57;UBERON:0006241!3.44e-11!57;UBERON:0007135!3.44e-11!57;UBERON:0005743!8.39e-11!86;UBERON:0002616!1.00e-10!59;UBERON:0000073!8.26e-10!94;UBERON:0001016!8.26e-10!94;UBERON:0000955!9.72e-10!69;UBERON:0006238!9.72e-10!69;UBERON:0003080!4.71e-09!42;UBERON:0002780!8.64e-09!41;UBERON:0001890!8.64e-09!41;UBERON:0006240!8.64e-09!41;UBERON:0000178!3.01e-08!15;UBERON:0000179!3.01e-08!15;UBERON:0000463!3.01e-08!15;UBERON:0002390!6.18e-08!102;UBERON:0003061!6.18e-08!102;UBERON:0001893!1.82e-07!34;UBERON:0002791!2.62e-07!33;UBERON:0001869!2.89e-07!32;UBERON:0002020!3.35e-07!34;UBERON:0003528!3.35e-07!34;UBERON:0002193!4.32e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-08;15!UBERON:0000179;2.94e-08;15!UBERON:0000463;2.94e-08;15!UBERON:0002780;8.24e-07;41!UBERON:0001890;8.24e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.79e-19,114;UBERON:0001017,1.02e-11,81;UBERON:0001049,6.31e-11,56;UBERON:0005068,6.31e-11,56;UBERON:0006241,6.31e-11,56;UBERON:0007135,6.31e-11,56;UBERON:0001016,1.42e-10,89;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0000955,1.71e-09,68;UBERON:0006238,1.71e-09,68;UBERON:0002780,8.60e-09,41;UBERON:0001890,8.60e-09,41;UBERON:0003080,8.60e-09,41;UBERON:0006240,8.60e-09,41;UBERON:0002390,1.05e-08,98;UBERON:0003061,1.05e-08,98;UBERON:0000178,3.00e-08,15;UBERON:0000179,3.00e-08,15;UBERON:0000463,3.00e-08,15;UBERON:0002193,9.87e-08,108;UBERON:0001893,1.82e-07,34;UBERON:0001869,2.88e-07,32;UBERON:0003528,3.34e-07,34;UBERON:0002020,3.34e-07,34;UBERON:0002791,3.55e-07,32 | |||
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| ||
|short_description=p2@EPC1 | |||
}} | }} |
Latest revision as of 00:06, 18 September 2015
Short description: | p2@EPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPC1_5end |
Coexpression cluster: | C1115_CD4_CD34_CD8_CD19_Basophils_Peripheral_Dendritic |
Association with transcript: | 0bp_to_ENST00000375110, uc001iwi.3, uc009xlt.2_5end |
EntrezGene: | EPC1 |
HGNC: | 19876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.62e-23 | 177 |
hematopoietic stem cell | 1.99e-23 | 168 |
leukocyte | 2.60e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.74e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 1.39e-18 | 120 |
lymphocyte | 4.14e-18 | 53 |
common lymphoid progenitor | 4.14e-18 | 53 |
lymphoid lineage restricted progenitor cell | 4.74e-18 | 52 |
nongranular leukocyte | 3.33e-17 | 115 |
mature alpha-beta T cell | 2.32e-11 | 18 |
alpha-beta T cell | 2.32e-11 | 18 |
immature T cell | 2.32e-11 | 18 |
mature T cell | 2.32e-11 | 18 |
immature alpha-beta T cell | 2.32e-11 | 18 |
T cell | 1.64e-10 | 25 |
pro-T cell | 1.64e-10 | 25 |
CD8-positive, alpha-beta T cell | 2.29e-08 | 11 |
B cell | 1.56e-07 | 14 |
lymphocyte of B lineage | 2.67e-07 | 24 |
pro-B cell | 2.67e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.79e-19 | 114 |
central nervous system | 1.02e-11 | 81 |
neural tube | 6.31e-11 | 56 |
neural rod | 6.31e-11 | 56 |
future spinal cord | 6.31e-11 | 56 |
neural keel | 6.31e-11 | 56 |
nervous system | 1.42e-10 | 89 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
brain | 1.71e-09 | 68 |
future brain | 1.71e-09 | 68 |
regional part of forebrain | 8.60e-09 | 41 |
forebrain | 8.60e-09 | 41 |
anterior neural tube | 8.60e-09 | 41 |
future forebrain | 8.60e-09 | 41 |
hematopoietic system | 1.05e-08 | 98 |
blood island | 1.05e-08 | 98 |
blood | 3.00e-08 | 15 |
haemolymphatic fluid | 3.00e-08 | 15 |
organism substance | 3.00e-08 | 15 |
hemolymphoid system | 9.87e-08 | 108 |
telencephalon | 1.82e-07 | 34 |
cerebral hemisphere | 2.88e-07 | 32 |
brain grey matter | 3.34e-07 | 34 |
gray matter | 3.34e-07 | 34 |
regional part of telencephalon | 3.55e-07 | 32 |